Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	LATS2	Gene	0	10.07	39.03	49.11	17.53	3.55	28.70	9.88	8.25	30.32	34.25	12.66	18.58	17.96	23.30	7.50	13.62	13.61	27.85	12.11	3.75	44.29	14.34	20.55	61.42	24.14	19.67	18.44	5.82	28.24
2	496544	Transcript	0	0.91	4.48	9.04	8.75	3.17	0.60	0.00	1.62	1.84	2.43	2.06	2.08	0.30	1.24	0.00	1.07	0.82	3.27	2.13	0.00	4.39	6.15	2.71	0.98	2.10	2.52	0.61	2.10	3.82
3	382592	Transcript	0	16.07	37.31	79.64	23.03	1.87	35.25	9.93	12.18	22.96	51.21	15.91	29.14	21.05	36.87	4.51	17.05	19.99	38.24	9.51	4.48	53.23	18.04	29.47	65.71	31.35	36.28	18.80	9.00	34.28
4	472754	Transcript	0	0.00	0.00	2.24	0.00	0.00	1.23	0.75	0.00	0.00	0.00	0.00	0.00	0.00	0.42	0.00	0.02	0.00	3.21	0.00	0.00	2.51	0.04	1.47	0.00	0.00	1.64	0.00	0.02	0.51
5	ER1a	ExonRegion	0	1.82	8.96	18.09	17.51	6.34	1.21	0.00	3.24	3.68	4.86	4.11	4.16	0.59	2.47	0.00	2.15	1.64	6.53	4.25	0.00	8.77	12.29	5.42	1.96	4.20	5.05	1.22	4.20	7.65
6	E1_Ab	KnownBoundary	0	5.37	18.03	50.15	40.98	13.56	11.28	0.00	9.06	7.49	9.51	12.08	7.65	2.71	6.09	0.00	3.82	3.83	13.87	8.09	0.00	24.99	22.95	13.94	5.50	7.73	13.30	1.89	9.08	14.29
7	ER1b	ExonRegion	0	1.45	8.58	17.12	4.40	2.68	7.31	0.90	1.39	1.79	8.40	2.90	4.05	1.45	4.61	0.00	5.92	2.48	12.90	2.79	0.70	14.50	6.54	7.59	7.61	3.61	3.25	2.10	2.01	4.91
8	E1a_E2a	KnownJunction	0	2.48	40.72	3.91	0.00	0.00	24.56	2.63	2.04	5.85	22.81	9.14	7.56	5.06	13.16	0.00	20.43	2.99	23.12	24.28	0.00	42.48	3.74	7.24	28.05	13.41	3.82	0.00	8.09	13.90
9	E1a_E2b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
10	ER2a	ExonRegion	0	2.14	36.13	3.37	0.00	0.00	21.99	4.03	3.68	3.75	20.69	11.90	6.18	3.90	11.49	0.00	20.25	3.34	28.20	13.58	0.00	32.33	3.61	13.86	19.36	12.86	3.14	3.66	6.52	13.42
11	ER2b	ExonRegion	0	9.10	31.19	57.17	13.99	0.94	33.14	5.18	8.52	9.12	40.00	12.80	14.19	9.45	30.63	2.03	19.83	9.55	35.88	12.48	3.39	47.75	21.90	23.79	36.41	26.28	17.26	16.55	3.81	19.86
12	E2_Da	NovelBoundary	0	10.09	16.68	60.22	0.00	0.00	17.76	9.78	4.58	5.06	13.54	9.46	12.95	8.02	19.81	0.00	3.52	10.02	9.12	8.09	3.06	26.91	14.78	18.07	7.66	16.25	9.14	10.29	0.00	8.02
13	E2_Db	NovelBoundary	0	0.00	4.85	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
14	E2b_E4a	KnownJunction	0	5.49	25.79	68.91	10.78	0.00	12.97	2.40	7.61	8.40	34.23	7.18	15.87	11.21	30.93	0.00	3.75	13.44	41.61	8.09	0.00	42.80	13.81	33.39	21.65	11.14	28.07	19.33	1.80	18.22
15	E2b_E5a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.48	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
16	ER2c	ExonRegion	0	12.40	21.82	73.26	7.31	0.00	22.68	7.63	11.70	8.83	30.53	9.44	18.55	12.43	33.69	0.00	5.06	14.88	29.63	6.47	2.41	40.35	21.12	31.90	22.59	18.89	23.57	16.22	1.05	15.82
17	I2_AR1	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.00	4.34	0.00	0.73	2.14	0.00	0.00	0.00	0.73	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.45	0.00	0.00	0.00	0.42	0.89	0.64	0.00	0.00
18	E3_Aa	NovelBoundary	0	0.00	0.00	2.79	10.78	0.00	0.00	0.00	0.00	0.00	2.04	2.78	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.48	9.46	0.00	1.59	0.00	0.00	0.00	1.78
19	ER3a	ExonRegion	0	0.00	0.00	1.47	0.00	0.00	0.92	1.50	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.04	0.00	1.79	0.00	0.00	1.49	0.08	2.94	0.00	0.00	1.43	0.00	0.05	1.02
20	E3a_E4a	KnownJunction	0	0.00	0.00	3.01	0.00	0.00	1.53	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.84	0.00	0.00	0.00	4.62	0.00	0.00	3.53	0.00	0.00	0.00	0.00	1.85	0.00	0.00	0.00
21	I3_AR1	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.04	0.00	0.00	1.40	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.03
22	E4_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.68
23	ER4a	ExonRegion	0	15.13	24.01	67.64	2.58	4.94	18.36	4.03	8.98	7.58	31.93	10.89	17.85	10.16	29.13	0.34	9.40	14.16	31.09	11.57	3.93	30.96	21.71	25.27	32.45	17.03	27.39	11.68	4.38	28.96
24	E4a_E5a	KnownJunction	0	12.68	4.46	69.59	10.78	10.91	28.39	5.38	12.34	13.79	29.92	12.88	32.02	7.13	42.85	7.77	24.79	14.97	27.74	16.18	3.72	32.09	11.77	25.71	33.92	16.48	11.89	4.08	4.54	15.52
25	E5_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	5.49	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.09	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
26	ER5a	ExonRegion	0	10.07	11.05	70.69	14.15	1.30	16.85	5.08	4.76	5.56	23.25	4.91	13.93	9.63	27.29	2.54	13.01	11.06	27.80	6.74	1.08	25.32	17.97	21.79	27.02	13.62	17.54	3.85	5.90	17.41
27	E5_Da	KnownBoundary	0	16.22	3.88	50.83	0.00	0.00	15.50	2.80	8.76	5.88	17.70	5.47	12.23	6.59	12.16	0.00	9.94	10.20	33.91	0.00	0.00	21.50	13.71	21.08	27.75	10.23	7.77	0.00	8.63	7.92
28	ER5b	ExonRegion	0	8.66	15.99	41.85	5.42	1.83	13.44	4.35	6.57	5.47	18.88	4.57	11.69	8.25	15.06	0.79	10.30	9.16	25.13	6.26	2.02	22.31	12.46	17.45	20.44	12.44	13.71	5.93	5.20	12.51
29	E5_Db	NovelBoundary	0	0.00	8.34	2.99	0.00	0.00	1.96	0.00	6.67	0.00	2.04	0.00	0.00	0.00	2.53	0.00	0.00	4.16	5.39	8.09	0.00	1.85	0.00	0.00	0.00	0.00	0.00	0.00	2.02	0.00
30	E5b_E6a	KnownJunction	0	22.06	60.01	113.96	8.84	7.37	50.03	12.64	21.05	19.95	38.83	15.37	36.02	20.60	60.89	8.37	34.73	23.79	50.99	8.09	7.28	64.46	11.38	36.64	78.96	32.92	43.99	19.43	20.31	24.50
31	E6_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.86	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.45	0.00	0.00	0.00	0.00	0.00
32	ER6a	ExonRegion	0	19.68	46.16	109.70	32.02	3.23	44.74	12.62	22.68	27.82	62.86	21.79	39.02	26.80	47.63	5.58	21.37	26.98	53.87	17.40	4.72	70.57	26.12	40.76	82.27	51.00	53.63	29.41	12.62	47.11
33	E6_Da	NovelBoundary	0	0.00	0.00	2.62	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.69	0.00	0.00	0.00	0.00	4.62	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.62
34	E6a_E7a	KnownJunction	0	22.30	23.17	80.43	79.37	0.00	58.74	15.62	11.79	35.48	76.34	20.15	45.48	25.98	49.17	7.37	16.60	24.96	23.12	0.00	7.03	45.32	36.80	40.58	79.61	41.41	46.73	0.00	12.63	48.33
35	E6a_E8a	NovelJunction	0	0.00	0.00	1.40	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	5.70	0.00	0.00	0.00	1.78	0.00	0.00	0.00	0.00
36	E7_Aa	NovelBoundary	0	8.85	0.00	4.83	9.06	0.00	1.96	2.63	9.70	0.00	0.00	0.00	0.00	1.34	2.15	0.00	0.00	0.00	4.62	0.00	0.00	1.64	0.00	0.00	4.61	0.00	0.00	0.00	0.00	0.00
37	ER7a	ExonRegion	0	19.24	34.86	138.08	45.75	4.08	39.87	10.46	15.35	26.17	71.57	20.50	44.10	35.01	52.39	2.75	17.36	27.15	43.31	9.92	5.50	59.87	25.70	33.34	93.55	42.33	44.10	28.02	8.70	53.14
38	E7_Da	NovelBoundary	0	0.00	0.00	10.24	0.00	0.00	1.73	5.61	0.00	1.55	0.00	0.00	3.25	0.00	0.00	0.00	0.00	1.19	0.00	0.00	0.00	1.72	0.00	0.00	3.05	3.52	3.78	0.00	0.00	0.00
39	E7a_E8a	KnownJunction	0	33.33	22.98	148.97	9.49	0.00	30.73	13.27	9.26	29.30	69.59	13.03	45.90	26.30	42.83	0.00	20.27	29.01	36.99	0.00	6.62	28.24	23.48	37.92	122.02	31.71	40.55	33.94	13.12	35.03
40	I7	Intron	0	2.52	2.42	7.68	3.13	0.49	0.55	1.28	0.74	2.46	1.02	0.80	0.37	1.43	1.20	0.62	0.83	0.90	2.52	2.04	0.65	4.40	0.85	0.73	3.25	1.01	1.16	0.68	0.27	1.01
41	I7_AR1	ActiveIntronRegion	0	2.91	2.81	8.70	3.62	0.38	0.59	1.49	0.79	2.85	1.07	0.92	0.43	1.48	1.35	0.54	0.96	0.99	2.62	2.36	0.75	4.71	0.91	0.84	3.68	1.17	1.34	0.78	0.32	1.17
42	E8_Aa	NovelBoundary	0	0.00	0.00	1.54	0.00	0.00	0.00	0.00	2.54	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.44	0.00	0.00	0.00	0.00
43	ER8a	ExonRegion	0	26.04	48.20	117.19	32.53	2.33	44.05	13.34	18.03	32.75	98.70	20.18	46.60	33.60	47.42	10.68	19.30	38.14	51.04	5.41	6.17	67.00	29.47	37.42	116.32	57.40	68.70	16.65	12.00	51.22
44	E8_Da	NovelBoundary	0	8.02	0.00	0.95	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.20	5.00	0.00	0.00	0.00	0.00	4.62	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
45	E8a_E9a	KnownJunction	0	27.07	50.41	109.43	47.24	0.00	59.85	15.28	22.94	38.49	88.12	37.90	44.64	40.44	56.81	8.37	19.28	33.02	69.35	8.09	11.50	123.46	17.65	36.79	79.20	57.81	89.26	45.82	9.97	77.94
46	E9_Aa	NovelBoundary	0	0.00	0.00	0.00	8.84	0.00	0.00	11.27	4.08	5.63	3.52	0.00	0.00	1.97	1.13	0.00	0.00	0.92	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.32
47	ER9a	ExonRegion	0	7.99	58.75	26.25	20.67	5.44	34.65	14.85	5.68	56.28	32.53	15.72	17.16	24.05	17.86	14.74	12.90	12.98	20.71	16.02	4.94	52.81	9.21	15.83	90.21	24.19	12.43	25.95	4.99	34.53