Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	LNX2	Gene	0	20.49	42.63	31.01	50.36	28.65	47.90	32.61	33.98	30.72	80.08	67.60	85.04	41.56	33.90	28.10	28.70	35.34	40.39	55.45	25.30	50.16	19.12	40.34	24.67	21.18	22.17	40.80	41.56	43.47
2	316334	Transcript	0	27.02	29.69	47.54	67.40	35.23	40.81	31.36	46.63	13.41	84.97	72.63	92.94	38.63	38.94	11.37	26.35	36.68	45.76	46.56	20.34	42.71	23.97	48.78	17.14	23.42	30.34	36.56	55.94	38.28
3	IG42_AR1	ActiveIntergenicRegion	0	2.13	0.00	2.21	18.80	7.67	2.73	2.67	1.17	0.00	2.58	1.18	1.64	0.86	0.81	1.53	6.08	0.00	6.75	4.97	0.91	3.31	0.00	4.16	0.71	0.47	1.56	2.40	7.35	2.22
4	ER1a	ExonRegion	0	6.72	1.42	2.47	0.00	0.00	5.54	5.58	4.85	0.00	11.84	3.97	3.26	3.46	5.41	3.17	7.25	1.47	6.91	3.17	3.00	7.37	2.76	3.50	1.65	2.33	4.82	0.79	1.14	1.07
5	ER2a	ExonRegion	0	27.63	37.29	32.50	61.36	26.36	59.48	34.78	37.71	9.63	105.07	113.87	84.03	33.11	52.28	6.21	42.20	28.64	39.49	54.75	30.58	54.58	29.72	58.75	18.16	25.28	25.64	43.50	40.57	38.52
6	E2a_E3a	KnownJunction	0	17.28	21.72	65.23	56.73	43.33	51.99	48.29	43.89	18.73	121.83	120.75	107.41	47.83	59.56	7.57	60.89	32.86	27.74	40.46	48.38	60.01	30.48	57.08	23.21	25.00	56.95	19.98	61.24	29.88
7	E3_Aa	NovelBoundary	0	3.01	9.70	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.65	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
8	ER3a	ExonRegion	0	26.71	43.91	60.20	95.51	34.31	68.01	41.25	73.12	11.33	121.43	109.86	101.01	40.20	46.49	8.88	38.04	35.68	43.83	42.85	31.79	60.35	32.58	67.42	14.62	27.73	36.94	40.32	62.72	43.19
9	E3a_E4a	KnownJunction	0	15.81	17.55	47.41	29.98	44.51	22.45	20.14	66.64	7.95	45.74	25.56	75.87	34.49	33.70	0.00	12.85	38.49	23.50	32.15	7.77	26.39	10.79	39.01	8.37	14.55	31.37	16.80	27.41	31.13
10	ER4a	ExonRegion	0	39.83	25.82	55.04	54.84	22.69	42.82	31.37	66.42	10.88	93.07	60.68	97.55	36.38	43.54	8.12	28.95	36.34	53.51	38.08	19.70	40.90	24.53	61.44	13.66	25.37	31.24	39.10	58.04	39.22
11	E4_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.54	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.26	0.00	0.00	0.00	1.60	0.00	0.00	0.00	1.82	0.00	0.00	0.00	0.00
12	E4a_E5a	KnownJunction	0	62.70	12.89	56.61	78.73	26.97	33.11	32.78	62.75	14.01	86.48	34.48	73.85	26.69	46.57	8.37	23.10	37.30	46.75	48.55	40.61	46.85	28.59	75.80	14.54	12.65	29.95	26.54	59.80	28.59
13	E4a_E6a	NovelJunction	0	0.00	0.00	0.00	0.00	7.37	1.53	5.09	0.00	0.00	10.63	0.00	5.12	1.46	2.95	0.00	0.00	1.37	0.00	0.00	0.00	0.00	2.19	4.33	0.00	0.00	6.31	0.00	0.00	1.45
14	E5_Aa	NovelBoundary	0	0.00	0.00	0.00	9.92	0.00	0.00	0.00	0.00	0.00	2.04	0.00	1.57	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
15	ER5a	ExonRegion	0	30.17	23.98	61.38	52.81	33.48	33.71	29.40	65.72	8.12	80.17	57.94	88.72	34.67	40.34	8.68	33.82	33.55	49.16	29.30	25.01	40.43	32.55	54.36	15.08	24.44	31.26	42.32	58.69	35.48
16	E5_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.04	0.00	3.67	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
17	E5a_E6a	KnownJunction	0	28.49	21.14	38.22	64.71	35.66	18.88	25.00	34.69	4.72	80.29	66.53	65.54	22.64	41.30	0.00	12.85	15.80	89.39	8.09	11.25	27.56	13.08	37.97	19.44	32.32	19.91	6.76	33.11	27.80
18	E5a_E7a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.75	0.00	0.00	0.00	0.00	0.00	2.48	0.00	0.00	0.00	0.00	11.93	0.00	0.00
19	E6_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	1.50	0.00	0.00	0.00	3.12	0.00	0.00	1.24	0.86	0.00	0.00	1.19	0.00	0.00	0.00	0.00	1.90	0.00	0.00	1.93	3.43	0.00	0.00	0.00
20	ER6a	ExonRegion	1	28.39	31.09	57.97	84.81	36.60	34.12	29.00	72.01	9.46	86.42	70.23	116.85	45.72	44.46	4.43	24.55	42.66	49.67	44.22	21.84	45.34	25.80	47.89	19.35	20.87	33.62	32.06	67.69	43.93
21	E6_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.54	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.19	0.00	2.25	0.00
22	E6a_E7a	KnownJunction	1	20.47	35.00	66.82	123.59	46.57	36.68	22.66	55.59	14.59	88.96	104.20	140.99	44.65	40.19	28.70	30.52	36.01	78.60	56.65	4.13	34.05	15.75	41.71	28.17	28.34	19.87	54.27	89.68	41.30
23	E7_Aa	NovelBoundary	0	2.77	3.97	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.33	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
24	ER7a	ExonRegion	1	31.41	33.09	53.99	63.14	36.94	37.76	26.53	52.23	8.74	88.63	66.63	110.20	38.58	35.76	4.28	19.95	41.28	42.12	51.67	15.25	38.53	30.70	50.43	18.91	30.32	37.07	47.17	79.37	37.41
25	E7_Da	NovelBoundary	0	0.00	0.00	0.00	32.35	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.93	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
26	E7a_E8a	KnownJunction	1	36.98	45.28	38.87	110.43	49.22	29.20	33.59	42.75	8.47	91.52	74.66	126.65	47.19	36.89	8.17	6.58	49.21	47.78	80.92	13.98	29.16	44.34	51.71	12.80	25.53	39.74	57.35	71.76	39.62
27	E8_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.07	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
28	ER8a	ExonRegion	0	28.09	24.42	48.96	74.86	29.29	40.76	35.76	35.65	10.92	80.50	70.68	107.21	39.51	37.72	11.78	25.26	47.62	39.83	43.83	19.12	42.31	31.32	45.26	15.92	27.32	36.78	45.09	72.84	45.60
29	E8_Da	NovelBoundary	0	3.01	0.00	1.54	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	5.14	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
30	E8a_E9a	KnownJunction	0	10.32	19.49	71.58	52.41	48.49	59.70	48.98	41.16	11.33	81.85	102.59	87.98	48.63	35.85	16.74	23.33	55.71	55.35	80.92	11.91	72.84	22.46	43.73	9.99	28.00	26.95	46.17	83.71	62.69
31	E9_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.45	0.00	0.00	0.00	0.00	0.00	0.00	8.09	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
32	ER9a	ExonRegion	0	28.65	33.61	46.94	71.24	30.30	56.08	34.98	36.43	19.07	102.63	109.86	117.38	49.26	41.17	18.77	29.54	51.09	46.40	44.46	24.82	53.35	22.72	60.15	20.65	30.05	36.05	46.99	69.86	51.95
33	E9_Da	NovelBoundary	0	2.95	3.68	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.04	0.00	1.72	5.54	0.00	0.00	0.00	0.00	4.62	0.00	0.00	1.68	0.00	0.00	0.00	1.93	0.00	0.00	4.36	0.00
34	E9a_E10a	KnownJunction	0	33.39	55.16	35.23	100.73	61.90	56.13	31.98	28.71	26.31	94.51	60.83	92.74	57.54	33.48	16.74	28.92	42.18	46.23	72.83	11.08	36.30	22.32	53.78	22.79	23.94	33.56	52.88	41.65	45.53
35	I9	Intron	0	1.80	1.35	0.28	0.00	0.00	2.66	0.17	0.39	1.17	2.74	0.55	2.05	0.11	1.45	0.00	1.67	2.38	1.89	2.55	0.75	1.74	0.00	0.15	0.45	0.66	0.46	0.23	0.34	0.31
36	I9_SR1	SilentIntronRegion	0	1.71	0.64	0.33	0.00	0.00	1.64	0.00	0.37	0.33	1.73	1.19	2.34	0.00	1.35	0.00	0.00	1.49	0.77	1.27	0.00	1.14	0.00	0.00	0.00	0.85	0.63	0.36	0.65	0.67
37	I9_AR1	ActiveIntronRegion	0	2.56	2.90	0.23	0.00	0.00	2.28	0.00	0.49	1.11	1.92	0.32	1.82	0.17	0.90	0.00	1.64	2.18	2.37	3.36	2.35	0.19	0.00	0.00	0.51	0.76	0.42	0.24	0.22	0.53
38	I9_SR2	SilentIntronRegion	0	1.34	0.63	0.30	0.00	0.00	3.38	0.36	0.33	1.60	3.74	0.43	2.10	0.12	1.86	0.00	2.44	2.94	2.08	2.59	0.00	3.06	0.00	0.32	0.62	0.51	0.42	0.16	0.29	0.00
39	E10_Aa	NovelBoundary	0	2.60	4.75	0.00	0.00	0.00	0.00	0.00	2.24	0.00	0.00	1.27	3.73	0.00	1.33	0.00	0.00	2.43	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
40	ER10a	ExonRegion	0	13.33	51.58	16.23	37.34	27.48	48.22	32.41	18.97	47.20	68.51	54.02	75.58	44.89	26.17	44.02	25.71	34.30	37.37	65.18	25.85	52.52	11.04	28.02	31.18	17.44	14.36	39.96	27.72	46.14
41	IG41_SR5	SilentIntergenicRegion	0	0.00	0.94	0.00	0.00	2.86	1.61	1.18	0.00	0.49	3.81	0.70	0.73	1.13	1.19	0.00	0.00	1.31	4.05	0.00	0.00	0.42	0.00	0.00	0.00	0.84	0.00	0.00	1.43	5.09
42	IG41_AR1	ActiveIntergenicRegion	0	11.71	1.11	3.04	36.24	1.65	1.85	24.23	7.55	5.60	2.76	0.41	2.55	1.95	1.72	7.56	4.00	2.54	4.00	2.76	5.11	1.57	2.71	0.94	2.60	1.73	2.60	1.64	2.40	3.88