Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	RFXAP	Gene	0	21.10	61.10	26.09	106.91	48.07	63.17	44.34	52.29	85.44	45.98	65.47	90.04	47.00	38.93	57.14	35.45	39.13	27.98	146.11	15.50	78.25	12.21	18.13	35.31	22.33	24.58	42.39	27.59	24.19
2	255476	Transcript	0	21.97	54.56	22.59	82.13	48.12	56.40	37.62	56.95	70.81	39.69	56.44	79.01	45.16	36.43	47.96	29.09	34.74	24.22	124.95	13.75	71.08	10.04	16.64	31.19	20.62	26.19	41.96	30.39	20.86
3	472888	Transcript	0	5.36	10.40	4.68	8.53	11.62	10.77	6.38	19.33	8.24	7.22	11.31	14.43	12.34	9.12	6.53	2.53	7.94	5.91	18.10	1.87	13.55	2.40	4.22	4.66	4.29	6.81	7.63	11.14	4.03
4	ER1a	ExonRegion	0	15.66	14.98	17.96	58.67	28.72	19.79	14.26	34.01	13.69	16.82	14.70	25.45	17.69	14.12	16.48	15.72	15.44	15.30	37.12	5.00	26.28	11.06	10.53	11.01	9.28	20.56	7.73	20.83	10.35
5	E1_Da	NovelBoundary	0	8.55	0.00	0.00	0.00	0.00	0.00	2.17	0.00	1.31	1.72	1.61	1.54	0.00	5.36	8.77	0.00	1.35	0.00	32.37	0.00	1.97	0.00	0.00	0.00	3.64	4.38	0.00	0.00	2.05
6	E1a_E2b	KnownJunction	1	37.51	57.59	25.56	38.61	72.95	56.02	37.08	114.41	50.70	36.71	52.07	91.14	70.79	50.96	34.48	17.67	42.81	28.64	104.98	15.13	86.72	10.55	22.56	29.73	23.68	49.78	55.51	65.20	18.55
7	I1	Intron	0	2.60	2.84	0.57	3.09	0.45	5.05	1.24	0.74	3.70	2.89	1.50	2.25	0.74	2.75	3.62	4.97	4.57	4.66	9.87	1.05	4.36	0.22	0.44	1.52	1.25	0.82	1.30	2.03	1.33
8	I1_SR1	SilentIntronRegion	0	2.72	1.46	1.06	2.60	0.44	3.98	1.10	1.00	3.55	2.48	1.19	2.74	0.76	4.05	3.08	5.56	5.00	3.14	7.52	0.75	4.52	0.16	0.66	1.75	2.20	2.14	0.17	2.50	1.63
9	I1_AR1	ActiveIntronRegion	0	0.50	0.75	0.00	0.00	0.00	5.67	1.35	1.13	2.73	3.71	3.33	2.44	0.70	1.44	6.14	2.31	3.36	0.90	7.36	0.00	2.33	0.23	1.26	1.50	1.87	0.37	1.71	2.14	1.28
10	I1_SR2	SilentIntronRegion	0	2.53	2.69	0.51	3.39	0.46	5.25	1.34	0.75	4.21	2.94	1.65	2.10	0.83	2.54	3.81	5.16	4.51	5.48	10.25	1.35	4.75	0.25	0.38	1.57	0.89	0.59	1.51	1.88	1.32
11	I1_AR2	ActiveIntronRegion	0	3.70	7.65	0.51	4.35	0.75	5.41	0.85	0.00	1.71	2.89	0.05	2.40	0.20	3.03	2.12	4.03	5.29	4.38	12.19	0.42	3.27	0.17	0.00	0.99	1.63	0.48	1.68	1.83	1.05
12	I1_SR3	SilentIntronRegion	0	8.05	2.31	0.00	0.00	0.00	3.16	0.65	0.00	0.43	1.05	0.00	0.84	0.00	0.15	0.00	8.82	1.95	4.43	17.74	0.00	1.73	0.00	0.00	0.00	1.12	0.00	0.00	4.89	0.00
13	E2_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	1.84	0.00	0.00	2.89	0.00	0.00	4.58	0.00	1.06	0.00	0.00	4.12	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.72
14	E2_Ab	NovelBoundary	0	4.66	3.88	0.00	0.00	0.00	5.18	2.92	0.00	3.35	0.00	0.00	1.27	0.00	1.97	0.00	3.21	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.41	0.00	0.00	0.00	0.00
15	ER2a	ExonRegion	0	10.72	20.80	9.35	17.06	23.25	21.54	12.77	38.66	16.48	14.44	22.61	28.86	24.68	17.23	13.07	5.06	14.69	11.83	36.21	3.75	27.10	4.81	8.44	9.32	8.58	13.62	15.26	22.28	8.05
16	ER2b	ExonRegion	0	34.70	80.74	23.62	87.27	48.09	59.25	43.48	94.81	57.32	55.31	85.72	122.00	59.66	52.17	36.33	38.13	46.69	31.22	150.16	11.95	84.72	20.72	30.93	48.47	29.55	33.50	40.16	49.08	19.97
17	E2_Da	NovelBoundary	0	3.01	9.31	1.54	0.00	0.00	7.44	2.57	0.00	7.70	1.80	0.00	3.73	0.00	2.39	17.74	0.00	8.15	4.62	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
18	E2a_E3a	KnownJunction	0	16.52	83.28	24.67	104.18	40.97	66.15	39.99	84.65	91.54	97.47	79.81	112.50	85.25	48.48	50.23	35.11	44.10	30.05	161.85	12.16	76.45	20.76	36.79	40.79	28.72	17.77	15.56	38.19	26.64
19	I2	Intron	0	2.34	5.96	0.76	4.86	0.74	5.28	1.44	0.83	2.81	2.94	1.52	2.07	0.49	2.18	5.09	4.86	3.82	4.12	13.72	2.98	5.32	0.00	0.41	2.84	0.54	0.59	0.97	0.43	1.11
20	I2_SR1	SilentIntronRegion	0	2.34	5.97	0.76	4.87	0.74	5.29	1.44	0.83	2.81	2.94	1.53	2.07	0.49	2.18	5.10	4.87	3.83	4.13	13.73	2.99	5.33	0.00	0.41	2.84	0.54	0.59	0.97	0.43	1.11
21	E3_Aa	NovelBoundary	0	7.85	0.00	0.00	10.78	0.00	6.45	0.00	0.00	5.88	0.00	4.37	3.16	0.00	10.70	0.00	11.47	4.86	5.39	24.28	0.00	8.90	0.00	0.00	0.00	0.00	2.15	0.00	0.00	0.00
22	ER3a	ExonRegion	0	26.42	89.43	55.07	106.61	51.35	85.56	50.43	70.36	78.37	58.57	92.01	126.39	81.47	53.43	48.31	34.22	47.74	32.95	187.08	22.56	102.27	15.33	24.89	47.20	28.51	44.06	50.65	55.36	19.53
23	E3_Da	KnownBoundary	0	25.84	89.87	51.75	124.24	83.71	54.87	31.53	49.77	88.80	65.75	127.84	134.30	60.79	50.92	58.40	42.61	50.60	19.26	153.76	22.91	80.10	25.72	12.71	59.10	35.54	38.62	106.45	45.11	14.03
24	E3a_E3b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.00	0.00	0.00	1.19	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
25	E3a_E3c	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.46	0.00	1.30	0.00	0.00	0.00	0.00	0.00	0.00	0.00	8.09	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
26	ER3b	ExonRegion	0	26.82	71.85	45.98	179.85	74.89	84.34	66.35	82.60	127.60	70.99	115.99	135.36	65.97	62.44	69.00	47.76	59.73	38.54	179.20	21.89	124.30	16.69	30.24	45.19	36.41	33.31	73.26	31.70	35.60
27	ER3c	ExonRegion	0	37.71	77.20	33.00	188.13	78.35	75.86	100.88	90.88	148.46	125.87	161.91	232.53	87.27	79.53	81.21	59.93	114.42	57.81	182.68	11.50	81.43	22.37	34.52	67.17	50.03	41.51	130.04	78.69	44.47
28	ER3d	ExonRegion	0	28.31	103.04	23.47	133.50	64.05	116.76	70.39	51.65	152.25	73.70	96.56	136.92	70.96	53.46	105.44	61.06	55.70	37.43	276.31	22.32	113.83	11.92	17.28	66.31	32.54	25.73	72.24	33.30	38.26
29	E3_Ac	KnownBoundary	1	8.32	144.26	2.59	99.65	40.09	144.45	63.97	39.56	151.07	36.47	66.69	92.47	41.40	28.58	156.07	30.45	32.12	37.76	339.66	35.73	179.17	0.00	9.16	34.33	18.18	10.13	44.78	10.29	32.42
30	ER3e	ExonRegion	1	4.70	73.79	1.18	45.82	16.44	42.00	31.14	14.65	89.65	14.12	21.73	56.68	27.04	19.78	72.16	19.96	21.59	19.80	139.48	18.02	52.94	1.88	6.28	18.67	4.93	4.45	14.44	6.45	16.96
31	ER3f	ExonRegion	0	1.53	25.34	0.00	0.00	0.00	5.11	0.00	2.10	9.79	0.21	2.89	6.18	0.37	1.17	14.40	3.25	0.00	1.17	27.15	4.42	4.28	0.00	2.58	3.69	1.23	1.57	1.05	0.93	1.53
32	IG30	Intergenic	0	0.79	3.16	0.54	5.18	0.31	2.60	0.81	1.33	3.14	2.27	0.68	2.81	0.73	2.10	3.67	3.88	3.21	0.77	5.56	1.44	2.60	0.26	0.35	1.71	1.57	0.96	0.26	1.92	0.74
33	IG30_AR1	ActiveIntergenicRegion	0	0.00	0.74	0.00	0.00	0.00	1.90	0.23	0.42	2.58	3.16	0.55	1.99	0.30	0.47	0.00	5.42	2.41	1.63	4.05	1.18	2.13	0.00	0.21	0.99	0.49	0.36	0.00	1.13	0.23
34	IG30_AR2	ActiveIntergenicRegion	0	0.59	4.75	0.69	2.96	0.00	0.38	0.28	0.51	0.41	1.47	0.00	2.68	0.00	1.12	5.95	0.97	1.47	0.00	2.20	0.76	2.56	0.00	0.50	0.75	2.16	0.65	0.00	2.17	0.39
35	IG30_SR2	SilentIntergenicRegion	0	0.60	1.42	0.16	2.01	0.00	2.32	0.00	0.52	0.68	1.62	0.11	1.62	0.12	0.85	2.67	1.39	0.98	0.18	3.59	1.47	2.27	0.00	0.17	0.20	0.00	0.15	0.51	1.83	0.00
36	IG30_AR3	ActiveIntergenicRegion	0	0.22	2.33	0.00	2.51	0.00	3.26	0.93	0.12	2.53	2.38	0.31	2.03	0.63	1.24	0.97	3.33	2.99	0.76	7.10	1.31	2.91	0.12	0.38	1.24	0.94	0.93	0.00	0.21	0.53
37	IG30_SR3	SilentIntergenicRegion	0	1.21	1.83	0.32	3.65	0.74	2.23	0.46	1.82	2.47	2.31	0.48	3.85	0.70	1.75	1.19	5.30	3.81	0.44	4.69	1.10	2.77	0.69	0.53	1.37	1.94	1.67	0.00	3.42	0.43
38	IG30_AR4	ActiveIntergenicRegion	0	0.31	1.04	0.85	4.14	0.00	2.12	0.29	1.60	2.25	2.29	0.13	3.11	0.00	3.16	2.38	2.51	3.03	0.00	2.31	0.00	0.94	0.26	0.00	1.52	2.73	1.14	0.00	2.93	1.41
39	IG30_SR4	SilentIntergenicRegion	0	1.23	3.97	1.17	5.58	0.56	2.50	0.99	2.18	3.14	3.30	1.45	3.44	1.17	2.95	3.54	5.02	4.06	1.28	4.71	1.70	3.36	0.41	0.48	1.84	2.24	1.34	0.28	2.18	1.58
40	IG30_AR6	ActiveIntergenicRegion	0	1.32	6.43	0.72	15.86	0.55	4.86	2.50	2.26	9.06	1.71	1.33	3.50	1.55	4.14	12.59	6.66	6.06	1.40	12.91	2.03	3.14	0.31	0.50	5.22	2.38	0.85	0.92	2.09	1.21