Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	DCLK1	Gene	0	1.38	15.04	5.25	1.75	40.83	7.28	2.10	0.31	5.94	18.28	5.37	3.94	1.67	7.64	1.85	6.73	11.92	10.45	4.98	2.79	7.36	1.70	6.45	9.48	5.64	6.97	9.18	0.77	5.43
2	379892	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
3	255448	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
4	360631	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
5	460982	Transcript	0	0.80	10.94	0.39	1.41	20.30	4.33	1.66	0.14	5.87	7.23	2.57	1.77	0.80	2.81	1.00	4.50	4.46	4.37	4.14	1.62	4.55	0.94	2.01	5.06	2.45	0.95	5.84	0.25	2.99
6	379893	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
7	399319	Transcript	0	0.37	5.12	0.68	0.31	10.99	2.26	0.48	0.08	2.95	6.00	1.33	1.77	0.34	2.07	0.91	3.08	2.32	2.06	2.01	0.36	1.53	0.31	2.03	4.71	1.15	1.29	2.34	0.35	2.39
8	486239	Transcript	0	0.26	0.64	0.65	0.00	3.79	0.75	0.13	0.37	0.62	1.58	0.61	0.14	0.16	0.69	2.40	0.90	0.67	1.98	1.19	0.45	0.41	0.12	0.55	0.90	0.68	0.83	0.31	0.42	0.25
9	477664	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.21	0.00	0.00	0.00	0.26	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
10	IG19_AR1	ActiveIntergenicRegion	0	0.00	1.14	0.00	0.00	6.93	4.30	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.97	0.00	0.00	0.00	0.00	1.12	0.00	0.00	0.00	0.00	2.19	0.00	0.00	1.05
11	ER1a	ExonRegion	0	0.00	0.92	1.05	0.00	4.75	1.15	0.00	0.00	0.25	1.80	0.70	0.00	0.00	1.02	0.00	1.65	1.39	1.98	0.00	0.00	0.50	0.00	0.76	0.00	0.09	0.83	0.97	0.43	0.79
12	E1a_E2a	KnownJunction	0	0.00	0.00	4.26	0.00	13.12	3.80	0.00	0.00	1.19	3.64	2.66	0.00	0.00	4.54	0.00	0.00	5.11	0.00	0.00	0.00	1.93	0.00	2.51	0.00	1.52	0.00	0.00	0.00	1.45
13	ER2a	ExonRegion	0	3.83	12.65	13.40	6.31	44.70	9.27	2.24	0.48	0.34	31.57	7.56	4.60	0.56	21.17	0.60	13.06	17.85	19.58	4.95	5.55	12.64	2.93	15.02	3.91	9.10	15.65	4.48	0.77	6.26
14	E2_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.01	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
15	E2a_E3a	KnownJunction	0	4.54	17.16	30.00	8.63	67.20	14.08	5.32	0.00	1.37	34.71	11.89	9.85	1.97	34.74	0.00	26.62	28.99	42.77	0.00	0.00	21.10	6.22	4.58	7.66	12.81	41.15	18.34	4.27	18.78
16	ER3a	ExonRegion	0	6.90	17.97	20.31	1.24	74.82	13.97	6.12	1.01	2.07	48.55	13.70	9.98	2.84	29.70	0.68	21.94	27.48	28.93	7.80	6.83	11.24	4.24	17.14	9.42	15.08	24.42	10.59	2.14	10.84
17	E3a_E4a	KnownJunction	0	2.65	21.04	41.61	0.00	89.16	6.94	8.07	3.78	2.95	61.68	27.30	14.94	6.72	29.58	0.00	28.30	39.93	42.38	8.09	0.00	5.05	8.26	20.59	16.69	15.61	38.32	2.29	2.29	9.81
18	I3_AR6	ActiveIntronRegion	0	0.33	0.00	0.00	0.00	2.85	0.21	0.00	0.00	0.73	0.01	0.00	0.19	0.01	0.01	1.41	0.00	0.91	0.29	0.00	0.00	0.45	0.00	0.00	2.37	0.00	0.00	0.00	0.25	0.41
19	ER4a	ExonRegion	0	2.59	23.39	25.81	3.66	97.09	23.47	6.71	1.64	2.66	70.60	25.36	10.75	3.10	40.75	0.00	23.66	30.72	29.78	5.52	7.39	14.53	4.63	26.06	12.82	20.84	37.89	32.31	2.84	16.16
20	E4a_E5a	KnownJunction	0	4.90	18.52	14.33	0.00	98.59	25.25	5.03	4.28	4.63	72.50	29.96	10.81	6.75	42.96	0.00	29.83	46.35	23.12	0.00	18.28	26.91	7.44	21.18	9.09	19.44	43.56	8.10	0.00	11.98
21	ER5a	ExonRegion	0	4.73	17.49	17.42	0.00	89.03	12.13	3.64	2.53	1.67	61.75	21.69	11.46	3.12	27.37	0.00	26.24	36.22	26.55	10.60	7.93	12.22	3.77	22.29	8.40	12.45	35.72	13.21	1.07	11.48
22	E5a_E7a	KnownJunction	0	2.24	21.14	26.63	0.00	89.31	7.98	5.21	2.39	1.55	49.93	9.90	11.33	0.00	21.78	0.00	10.10	22.19	33.39	8.09	6.62	10.23	2.48	24.77	8.31	19.70	30.68	13.22	2.29	8.72
23	ER6a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.49	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.88	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
24	E6_Ab	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
25	ER6b	ExonRegion	0	0.00	0.00	0.00	0.00	2.18	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
26	E6a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
27	ER6c	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.08	0.00	0.00	0.00	0.05	0.31	0.00	0.00	0.30	0.00	0.00	0.00	0.20	0.00	0.00	0.00	0.00	0.00	0.00	0.07
28	E7_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.46	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.24	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
29	ER7a	ExonRegion	0	5.30	10.62	19.11	0.69	86.47	14.54	1.15	0.37	2.21	40.05	9.87	6.52	0.00	20.32	2.42	9.35	23.41	31.23	5.81	8.46	8.95	5.94	21.79	6.59	18.02	26.87	19.16	2.78	11.25
30	E7a_E8a	KnownJunction	0	5.96	9.60	5.86	8.63	61.45	0.00	0.00	0.00	0.00	19.49	4.62	1.45	0.00	10.59	0.00	3.67	8.01	13.87	0.00	0.00	1.48	2.48	4.33	2.69	8.71	5.71	0.00	0.00	8.32
31	E7a_E9a	KnownJunction	0	2.65	7.66	12.98	0.00	53.05	0.00	0.00	0.00	1.46	14.50	5.66	6.81	1.40	9.55	0.00	9.87	14.05	9.25	0.00	3.56	5.82	0.00	11.87	0.00	3.71	4.21	40.70	1.66	0.00
32	ER8a	ExonRegion	0	1.14	20.32	1.38	2.49	40.67	7.25	3.16	0.33	2.38	19.02	5.42	1.53	0.46	6.36	1.59	7.10	7.24	10.55	4.15	2.14	11.26	1.01	4.72	2.95	3.49	3.97	6.02	0.39	2.78
33	E8_Da	KnownBoundary	0	5.66	16.87	0.00	0.00	40.38	4.91	5.09	0.00	2.86	9.19	1.46	1.54	0.00	2.99	0.00	3.67	1.17	0.00	8.09	0.00	9.59	0.00	9.11	0.00	0.00	0.00	0.00	0.00	0.00
34	ER8b	ExonRegion	0	1.60	21.88	0.78	2.82	40.59	8.17	3.32	0.28	11.73	14.47	5.15	3.54	1.61	5.61	2.00	8.12	8.92	8.75	8.27	3.23	9.10	1.87	4.03	10.12	4.89	1.89	11.68	0.50	5.97
35	I8_AR1	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	9.96	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.80	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
36	ER9a	ExonRegion	0	0.40	3.98	12.87	1.12	64.53	3.20	0.00	0.00	0.57	13.57	1.92	8.03	0.00	9.36	0.00	5.84	15.27	13.74	1.28	2.45	4.23	0.89	9.19	5.26	2.89	12.48	6.68	1.13	2.04
37	E9a_E10a	KnownJunction	0	0.00	4.46	11.61	9.49	85.92	1.42	0.00	0.00	1.55	22.17	4.18	7.32	0.00	13.80	0.00	3.75	23.05	14.64	8.09	3.47	3.89	4.96	13.25	2.39	3.22	19.44	0.00	1.75	8.98
38	ER10a	ExonRegion	0	0.94	7.32	10.05	2.48	50.14	7.81	0.00	0.00	1.09	22.66	8.89	8.06	0.33	8.02	0.00	4.34	23.87	15.75	9.47	3.25	2.26	0.99	14.73	6.08	8.24	10.55	16.97	2.41	5.69
39	E10_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.99	0.00	0.00	0.00	0.00	0.00
40	E10a_E11a	KnownJunction	0	0.00	0.00	11.24	0.00	35.22	5.37	0.00	0.00	0.00	19.57	6.39	5.36	1.62	8.33	0.00	12.93	33.54	0.00	0.00	0.00	1.80	0.00	13.54	2.81	5.46	22.57	15.95	0.00	0.00
41	ER11a	ExonRegion	0	2.29	4.13	13.68	0.00	69.05	13.87	1.08	0.00	0.87	20.11	4.19	5.84	0.52	14.28	0.00	4.93	27.15	9.74	7.02	2.08	9.96	0.00	13.37	4.67	7.94	16.20	19.55	1.97	4.63
42	E11a_E12a	KnownJunction	0	5.84	4.85	14.60	0.00	86.51	30.46	2.92	0.00	1.13	23.41	0.00	9.16	0.00	18.30	0.00	10.40	23.70	23.12	16.18	8.27	13.24	0.00	10.64	13.52	11.59	10.17	28.68	6.87	7.13
43	ER12a	ExonRegion	0	1.14	10.48	11.43	0.00	69.91	15.76	2.00	0.00	0.31	31.22	10.36	8.56	0.41	13.45	2.85	8.50	29.68	20.15	13.99	5.86	6.01	1.38	18.14	7.98	17.25	10.74	11.54	3.21	5.11
44	E12a_E13a	KnownJunction	0	3.01	8.73	9.54	0.00	28.00	5.41	5.03	0.00	1.55	7.75	4.84	4.28	1.97	11.45	0.00	15.84	44.05	9.25	8.09	12.40	7.10	1.99	17.98	5.14	12.35	16.05	12.77	0.00	2.77
45	ER13a	ExonRegion	0	0.44	9.12	11.71	0.00	53.00	13.03	3.40	1.92	1.66	27.81	4.78	4.75	2.26	15.55	2.48	9.00	28.01	20.53	6.87	6.08	9.32	3.09	24.12	5.60	12.47	17.47	16.97	2.53	3.26
46	E13a_E14a	KnownJunction	0	0.00	12.51	8.82	0.00	48.04	5.76	2.35	0.00	0.00	34.71	13.86	3.89	1.43	11.28	0.00	3.67	26.20	10.02	0.00	22.25	9.27	6.42	15.91	5.80	5.23	8.50	2.34	4.22	3.37
47	ER14a	ExonRegion	0	1.63	18.97	9.52	0.00	46.21	8.19	3.43	0.99	2.86	22.65	8.15	4.50	2.64	14.76	1.76	6.19	22.02	18.90	3.65	9.23	7.41	3.03	15.60	3.66	6.97	17.64	6.41	2.08	2.01
48	E14a_E15a	KnownJunction	0	0.00	4.85	12.86	0.00	64.99	1.80	5.15	4.58	1.55	26.52	1.27	3.34	1.59	10.68	0.00	3.06	20.89	23.76	0.00	17.20	7.38	4.62	25.41	5.38	8.79	11.84	28.97	1.80	1.78
49	ER15a	ExonRegion	0	1.29	19.96	17.51	0.00	63.29	9.89	0.96	0.71	1.50	32.76	9.99	2.89	1.48	12.14	0.00	3.93	21.67	21.94	1.68	7.60	8.34	2.17	16.14	6.81	7.59	11.14	15.36	2.74	4.18
50	E15_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	7.22	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.93	0.00	0.00	0.00	0.00
51	E15a_E16b	KnownJunction	0	6.02	12.51	19.43	0.00	83.26	13.70	0.00	0.00	4.57	17.98	23.57	3.22	2.58	19.96	0.00	13.77	24.13	13.87	8.09	4.05	5.82	0.00	14.92	10.53	14.96	10.94	5.52	3.68	3.17
52	E16_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.82	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
53	ER16a	ExonRegion	0	0.24	0.55	1.31	0.00	4.98	0.76	0.00	0.00	0.19	1.20	1.06	0.27	0.14	1.01	0.00	0.56	1.34	0.76	0.25	0.16	0.24	0.00	1.11	0.36	0.79	0.61	0.61	0.18	0.15
54	ER16b	ExonRegion	0	4.58	22.72	15.39	0.00	66.84	9.42	1.07	0.00	3.49	36.03	14.88	5.50	2.12	17.85	0.00	7.30	24.88	21.92	5.37	3.98	12.54	1.63	16.22	13.69	10.18	11.75	9.83	5.69	5.28
55	E16a_E17a	KnownJunction	0	0.00	32.28	17.52	0.00	94.17	15.19	0.00	0.00	3.23	41.82	8.98	1.48	0.00	16.93	0.00	2.98	28.09	43.15	0.00	3.14	13.12	4.86	8.91	10.95	8.83	29.74	4.87	0.00	11.88
56	ER17a	ExonRegion	0	2.09	15.94	20.90	0.00	53.57	10.69	0.35	0.00	1.50	33.47	16.71	6.09	4.09	16.07	2.90	7.22	28.56	22.10	2.01	1.56	17.47	1.47	10.20	18.64	8.38	27.38	30.66	0.60	7.54
57	E17_Da	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.60	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
58	E17a_E18a	KnownJunction	0	5.25	17.94	17.47	0.00	29.33	10.32	2.57	0.00	1.55	19.53	17.97	9.19	4.78	16.46	0.00	9.64	30.32	27.74	0.00	0.00	15.60	0.00	9.21	19.32	8.52	14.76	22.41	3.68	3.37
59	ER17b	ExonRegion	0	0.29	0.74	0.00	0.00	2.60	0.73	0.27	0.74	1.04	1.96	0.16	0.00	0.17	0.37	4.80	1.23	0.00	3.21	2.13	0.73	0.57	0.24	0.00	1.44	0.57	1.05	0.00	0.65	0.36
60	ER18a	ExonRegion	0	1.41	14.15	13.87	0.00	59.25	5.81	1.56	0.00	4.47	35.84	9.57	10.37	4.98	16.49	2.80	6.86	36.08	23.92	4.29	2.93	9.06	3.98	14.53	9.57	9.18	26.24	10.25	4.68	12.64
61	E18a_E19a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
62	E18a_E20a	KnownJunction	0	0.00	12.41	9.22	0.00	0.00	0.00	0.00	0.00	5.51	25.37	1.30	2.59	9.14	8.71	8.37	7.42	24.78	32.49	0.00	2.98	3.69	0.00	11.38	2.21	7.35	33.52	1.84	0.00	9.97
63	ER19a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.06	0.00	0.00	0.00
64	E19_Da	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
65	E19a_E20a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
66	ER19b	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.21	0.00	0.00	0.00	0.26	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
67	ER20a	ExonRegion	0	1.20	18.55	10.40	1.96	63.20	9.83	1.84	0.28	6.82	26.67	7.00	6.07	3.47	9.30	3.05	6.31	19.63	14.50	4.22	3.28	9.35	2.47	8.75	18.38	8.72	12.21	13.16	0.79	8.33
68	E20_Da	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	7.29	0.00	0.00	0.00	3.60	2.85	0.00	1.40	1.00	0.00	0.00	1.10	0.00	0.00	0.00	3.49	0.00	1.92	6.64	3.52	0.00	0.00	0.00	4.03
69	ER20b	ExonRegion	0	0.37	5.12	0.68	0.31	10.99	2.26	0.48	0.08	2.95	6.00	1.33	1.77	0.34	2.07	0.91	3.08	2.32	2.06	2.01	0.36	1.53	0.31	2.03	4.71	1.15	1.29	2.34	0.35	2.39