Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	GPR81	Gene	0	1.01	2.17	1.10	1.05	0.46	1.68	1.24	1.54	2.73	3.03	2.13	0.83	0.97	1.05	4.34	2.35	1.45	2.18	2.20	5.55	1.64	1.32	1.97	10.93	1.42	2.17	0.48	5.49	8.33
2	356987	Transcript	0	0.40	0.61	0.31	0.60	0.26	0.45	0.55	0.46	0.63	0.60	0.50	0.39	0.45	0.17	1.74	0.81	0.27	0.68	1.13	1.20	0.45	0.31	0.23	1.25	0.35	0.31	0.05	0.65	0.68
3	432564	Transcript	0	0.47	1.42	0.55	0.58	0.03	1.67	0.69	1.42	1.40	1.99	1.80	1.74	0.52	1.33	2.03	1.12	3.47	1.00	1.03	3.32	2.13	0.81	1.41	11.17	1.03	1.44	0.68	7.22	6.88
4	436083	Transcript	0	5824.22	4282.11	10651.72	4303.92	3538.39	5546.72	3511.79	4255.88	14634.29	6485.84	3206.32	6299.91	6403.20	6674.06	4679.23	3868.47	20022.97	89.52	39.34	3392.98	6070.99	4106.12	3934.95	5105.79	5206.79	6653.97	4321.20	5933.02	7564.42
5	IG30_AR1	ActiveIntergenicRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.59	0.00	0.00	1.57	0.00	0.00	0.00
6	ER1a	ExonRegion	0	0.00	1.25	1.95	0.00	0.00	0.27	0.78	0.36	0.49	0.00	2.28	0.00	0.25	0.19	1.80	2.41	0.58	0.75	0.62	6.62	0.00	1.18	1.41	5.71	0.28	0.31	0.00	3.81	4.57
7	E1_Ab	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.27	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	7.77	0.00	2.33	0.00	2.93	0.00	0.00	0.00	1.93	0.00
8	ER1b	ExonRegion	0	0.15	0.89	1.33	0.00	0.34	0.52	0.49	0.53	1.32	1.99	1.15	0.13	0.13	0.65	0.86	0.89	0.46	0.80	0.22	6.05	0.20	1.34	2.06	6.69	0.49	0.92	0.06	4.01	10.45
9	E1_Da	KnownBoundary	0	0.00	0.00	0.95	0.00	0.00	0.00	0.00	2.54	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.64	0.00	1.85	0.00	5.44	0.00	0.00	0.00	4.22	7.13
10	E1a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
11	ER1c	ExonRegion	0	8.15	8.28	4.48	4.71	2.89	4.42	7.20	7.15	12.47	15.45	5.09	5.65	4.93	4.90	22.97	14.46	11.96	15.87	12.06	14.08	12.02	3.64	3.82	15.80	8.88	18.13	1.27	17.92	8.62
12	E1_Db	KnownBoundary	0	822.49	557.27	486.51	727.31	561.04	758.72	547.32	609.08	1074.21	874.13	396.92	420.96	638.93	600.67	727.12	605.87	1019.24	19.39	0.00	606.18	868.43	545.19	643.74	749.73	718.04	989.73	568.14	959.51	522.67
13	E1b_E2a	KnownJunction	0	5824.22	4282.11	10651.72	4303.92	3538.39	5546.72	3511.79	4255.88	14634.29	6485.84	3206.32	6299.91	6403.20	6674.06	4679.23	3868.47	20022.97	89.52	39.34	3392.98	6070.99	4106.12	3934.95	5105.79	5206.79	6653.97	4321.20	5933.02	7564.42
14	ER1d	ExonRegion	0	0.93	2.84	1.11	1.15	0.06	3.34	1.37	2.84	2.80	3.98	3.60	0.91	1.04	1.62	4.05	2.23	1.72	1.99	2.06	6.63	2.26	1.62	2.82	19.41	2.07	2.88	1.37	8.47	10.03
15	E1_Dc	NovelBoundary	0	110.01	77.37	58.38	88.87	79.14	108.93	69.00	39.46	152.17	148.96	51.69	59.04	64.07	69.13	105.84	58.29	194.39	0.00	0.00	67.07	153.50	76.33	47.18	91.64	78.95	116.00	26.74	148.90	88.81
16	E1c_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.56	0.00	1.04	0.00	0.00	5.22	0.00	0.00	0.00	2.01	0.00	0.00	2.93	0.00	0.00	0.00	5.98	3.73
17	I1	Intron	0	0.00	2.13	0.00	0.00	0.00	0.00	0.00	1.22	0.00	0.96	0.00	0.00	0.00	0.59	0.00	0.00	0.00	0.00	2.12	2.63	0.00	1.19	2.40	11.40	0.00	0.00	0.00	2.16	1.78
18	I1_SR1	SilentIntronRegion	0	0.00	2.13	0.00	0.00	0.00	0.00	0.00	1.22	0.00	0.96	0.00	0.00	0.00	0.59	0.00	0.00	0.00	0.00	2.12	2.63	0.00	1.19	2.40	11.40	0.00	0.00	0.00	2.16	1.78
19	E2_Aa	NovelBoundary	0	84.76	67.48	16.92	30.84	26.97	86.63	24.89	36.88	59.60	52.45	23.22	12.20	18.85	26.08	88.10	40.01	31.42	0.00	8.09	56.73	53.51	102.24	26.74	39.12	53.00	75.31	75.54	95.70	26.21
20	ER2a	ExonRegion	0	0.28	3.41	0.14	0.58	0.00	1.31	0.09	0.20	4.26	2.01	2.23	0.65	1.41	0.55	5.44	2.20	0.77	1.42	1.69	4.85	0.67	0.93	2.28	20.27	0.51	0.39	0.04	6.43	14.01
21	E2_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	7.64	0.00	0.00	11.12	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	6.51	0.00	35.89	0.00	0.00	0.00	0.00	8.52
22	I2_AR2	ActiveIntronRegion	0	28.71	8.05	0.61	0.00	0.00	3.46	0.65	0.21	1.20	8.33	0.77	0.11	2.06	0.67	0.58	1.41	0.37	2.51	0.34	0.96	2.91	7.15	0.84	36.67	0.39	0.44	0.40	0.29	65.55
23	I2_SR3	SilentIntronRegion	0	68.86	34.08	2.52	0.00	0.00	15.12	6.05	1.84	10.25	48.91	3.72	0.00	9.26	1.81	0.00	7.59	0.75	8.87	0.00	1.76	5.71	14.42	3.62	154.88	1.43	3.14	1.83	0.00	352.32
24	I2_AR3	ActiveIntronRegion	0	38.85	9.21	0.72	0.48	0.00	3.48	0.73	0.19	3.72	16.19	0.88	0.08	2.23	0.21	0.36	0.80	0.40	2.24	0.21	1.28	3.09	8.31	0.55	55.76	1.14	0.08	0.21	0.00	106.60
25	E3_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.37	0.00	0.00	1.72	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
26	ER3a	ExonRegion	0	0.00	1.69	0.00	0.00	0.00	0.72	0.00	0.97	0.00	0.00	0.00	0.93	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.47	0.00	0.00	0.00	0.00	0.71
27	E3_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.39	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.05	0.00	0.00	0.00	0.00	0.00
28	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.05	0.00	0.00	0.00	0.00	0.00
29	I3_AR1	ActiveIntronRegion	0	15.71	1.03	0.00	2.29	0.00	0.44	0.00	0.00	0.72	0.00	1.14	0.00	0.41	0.29	0.00	0.00	0.95	1.23	0.00	0.00	1.36	2.87	0.58	24.67	0.00	0.00	0.00	0.00	0.43
30	I3_AR1	ActiveIntronRegion	0	27.68	4.09	0.76	3.28	0.00	2.44	1.13	0.19	2.99	2.27	1.57	0.00	2.17	0.14	0.28	0.00	0.45	3.03	0.49	1.46	3.12	2.84	1.47	107.52	0.65	0.24	0.00	0.33	1.43
31	E4_Aa	NovelBoundary	0	20.59	9.21	13.25	19.63	0.00	9.17	0.00	4.78	41.26	19.21	0.00	9.34	1.53	26.39	8.97	3.29	64.96	0.00	0.00	0.00	13.72	0.00	2.12	23.33	16.63	2.19	0.00	12.94	17.76
32	ER4a	ExonRegion	0	2.57	0.62	0.22	2.86	0.00	2.75	2.68	0.98	2.62	3.07	0.63	0.66	1.04	0.84	10.19	4.91	0.99	4.92	7.66	4.20	2.85	0.96	0.48	1.03	2.66	1.88	0.49	0.65	0.71
33	E4_Da	NovelBoundary	0	36.57	26.86	5.53	27.82	24.76	24.06	22.60	21.40	9.96	13.74	18.92	10.51	13.34	7.44	8.57	13.31	7.65	0.00	0.00	29.19	27.15	15.02	16.94	29.37	11.29	31.76	6.76	9.48	9.05
34	E4a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
35	E5_Aa	NovelBoundary	0	2.95	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.56	4.03	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	8.09	0.00	2.05	0.00	0.00	0.00	0.00	2.19	0.00	0.00	0.00
36	ER5a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.04	0.00	0.74	0.00	0.64	1.31	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
37	E5_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.05	0.00	0.00	1.42	0.00	0.00	0.00	0.00	2.70	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.89	0.00
38	E5a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
39	I5	Intron	0	3.05	3.69	1.10	9.18	3.39	2.49	5.84	8.28	13.70	2.93	2.92	5.50	2.55	1.18	10.90	2.35	3.45	1.99	12.72	1.63	2.00	1.25	1.09	2.79	1.32	1.68	0.68	4.46	0.71
40	I5_AR2	ActiveIntronRegion	0	2.13	3.13	0.55	5.95	0.41	1.71	4.34	11.91	12.52	2.75	2.52	5.94	2.09	1.20	13.59	1.44	5.18	0.80	5.83	2.06	1.77	0.00	0.45	1.78	1.30	1.04	0.00	6.89	0.00
41	I5_SR2	SilentIntronRegion	0	1.44	3.03	1.00	7.58	3.96	2.37	4.55	3.18	12.28	2.44	1.07	3.20	1.71	0.46	7.68	1.63	3.27	1.02	10.25	1.68	1.21	0.89	0.70	2.27	1.21	1.05	0.97	3.97	0.85
42	I5_AR3	ActiveIntronRegion	0	8.70	7.51	1.46	17.30	2.85	3.72	5.91	12.80	20.51	5.79	7.01	9.73	2.92	2.18	17.67	2.17	2.22	4.62	21.41	0.80	3.33	2.63	1.66	6.90	2.08	5.04	0.00	3.53	0.39
43	I5_SR3	SilentIntronRegion	0	9.64	6.36	1.91	23.09	8.60	4.50	15.83	27.60	24.95	5.06	10.26	14.02	6.76	4.05	22.92	6.74	3.92	7.93	32.26	1.67	5.20	5.42	3.95	5.69	2.16	4.69	1.66	5.39	1.95
44	I5_SR4	SilentIntronRegion	0	4.72	7.90	4.37	7.94	2.54	4.86	11.19	2.68	17.10	2.89	5.19	10.49	7.78	2.15	9.95	6.62	1.84	1.54	33.70	2.99	4.96	0.00	2.27	4.83	0.78	1.79	0.00	3.02	0.90
45	Ix	Intron	0	2.09	4.49	0.35	3.00	2.04	1.72	1.69	2.05	6.64	2.01	1.41	1.89	1.31	0.82	4.22	1.51	1.35	0.96	4.45	1.24	1.59	0.50	0.25	1.80	0.80	1.20	0.26	1.25	0.42
46	Ix_SR2	SilentIntronRegion	0	2.16	4.60	0.36	3.10	2.03	1.75	1.67	2.09	6.79	2.04	1.43	1.92	1.26	0.85	4.37	1.56	1.38	1.00	4.37	1.28	1.65	0.52	0.26	1.77	0.82	1.25	0.23	1.29	0.43
47	Ix_AR1	ActiveIntronRegion	0	0.00	2.96	0.00	0.00	4.98	2.34	4.03	1.84	4.04	1.44	1.19	2.60	5.46	0.00	0.00	0.00	1.00	0.00	9.05	0.00	0.00	0.00	0.00	3.44	0.00	0.00	1.83	0.00	0.00
48	Ix_SR1	SilentIntronRegion	0	0.00	0.00	0.00	0.00	0.77	0.32	0.93	0.28	1.47	1.44	0.46	0.00	0.60	0.00	0.00	0.00	0.23	0.00	5.57	0.00	0.00	0.00	0.00	2.15	0.00	0.00	0.70	0.00	0.00
49	Ix	Intron	0	1.57	3.42	1.43	7.86	0.00	2.26	3.68	1.12	3.35	2.11	2.97	1.28	1.42	1.08	3.19	1.64	1.82	1.92	3.11	0.67	3.13	0.66	0.44	0.79	1.22	1.44	0.22	2.88	0.25
50	Ix_SR1	SilentIntronRegion	0	1.57	3.43	1.43	7.89	0.00	2.27	3.70	1.13	3.36	2.12	2.98	1.28	1.43	1.08	3.20	1.65	1.83	1.92	3.12	0.67	3.14	0.66	0.44	0.79	1.22	1.44	0.22	2.89	0.25
51	E6_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	1.42	5.26	4.83	4.99	0.00	1.27	1.30	0.00	0.00	8.37	0.00	3.69	0.00	0.00	0.00	3.05	0.00	0.00	0.00	0.00	3.35	0.00	0.00	0.00
52	ER6a	ExonRegion	0	1.03	1.93	0.60	2.57	2.34	0.33	1.45	1.75	2.55	1.56	1.57	1.33	1.40	0.54	3.63	0.00	0.89	0.46	1.91	0.00	1.20	0.65	0.22	1.03	0.17	0.56	0.00	1.37	0.16