Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	SNRNP35	Gene	0	48.50	89.15	114.89	150.21	54.90	65.65	47.60	51.69	105.37	100.54	81.87	60.88	103.20	71.25	91.59	58.55	92.74	96.19	71.93	43.05	36.99	108.86	81.84	111.58	88.80	135.94	69.42	144.06	56.67
2	438124	Transcript	0	0.49	1.79	0.38	1.63	0.00	0.94	0.46	0.00	0.89	1.64	0.54	0.56	0.30	0.92	3.75	0.56	1.01	0.88	2.18	0.63	0.65	0.41	0.41	0.98	0.33	0.72	0.00	0.74	1.37
3	350887	Transcript	0	21.47	79.87	162.09	307.12	129.48	30.42	54.75	34.54	86.65	87.68	68.10	85.55	124.91	54.01	85.49	61.11	112.76	105.41	130.71	34.24	30.10	98.19	125.69	59.06	85.69	218.77	79.58	207.50	98.12
4	392420	Transcript	0	3.46	2.79	15.91	20.71	5.47	7.97	6.02	3.64	6.29	9.16	5.10	6.38	7.51	7.25	6.90	3.14	22.22	10.38	7.75	3.67	4.73	4.21	4.66	4.88	5.84	11.97	6.31	12.64	5.81
5	412157	Transcript	0	9.35	12.47	9.39	15.94	6.45	9.75	2.87	10.41	13.19	14.36	7.34	10.69	6.17	8.32	25.37	11.27	13.91	8.62	6.21	3.59	9.67	3.07	4.24	8.28	10.60	11.26	14.79	15.47	5.49
6	361485	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.23	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
7	ER1a	ExonRegion	0	0.98	3.58	0.76	3.26	0.00	1.88	0.92	0.00	1.79	3.29	1.08	1.13	0.59	1.85	7.50	1.13	2.01	1.75	4.36	1.25	1.30	0.82	0.82	1.96	0.65	1.43	0.00	1.48	2.74
8	E1_Da	NovelBoundary	0	13.74	23.46	62.84	31.49	0.00	25.55	13.73	30.85	83.74	24.89	7.94	32.95	46.81	29.80	27.90	24.48	167.40	0.00	0.00	7.03	26.91	13.32	7.14	39.06	15.00	37.29	7.01	37.20	46.68
9	E1a_E5d	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
10	Ix	Intron	0	3.93	2.03	1.23	0.00	5.38	1.51	1.48	2.70	3.50	3.71	0.87	2.71	0.48	1.16	5.72	1.82	2.19	4.36	0.00	1.01	1.57	0.00	0.66	1.58	1.05	5.19	0.00	1.20	1.23
11	Ix_AR1	ActiveIntronRegion	0	3.96	2.05	1.24	0.00	5.41	1.52	1.49	2.72	3.53	3.73	0.88	2.73	0.48	1.17	5.76	1.83	2.21	4.39	0.00	1.02	1.58	0.00	0.67	1.57	1.06	5.23	0.00	1.20	1.24
12	I1	Intron	0	6.95	25.94	28.30	5.05	2.98	18.28	10.14	5.02	37.18	17.04	10.96	19.42	23.14	14.02	13.57	6.97	8.56	12.10	12.61	7.73	7.57	11.35	6.29	18.20	5.85	9.31	11.97	13.48	9.75
13	I1_SR1	SilentIntronRegion	0	6.96	25.96	28.32	5.06	2.99	18.30	10.15	5.02	37.21	17.05	10.97	19.44	23.16	14.03	13.58	6.98	8.57	12.12	12.63	7.73	7.58	11.37	6.30	18.22	5.85	9.32	11.98	13.50	9.76
14	Ix	Intron	0	9.65	5.10	6.47	7.23	1.97	7.07	4.61	3.71	22.31	12.77	2.64	5.49	5.86	4.44	12.36	4.41	10.89	4.91	3.44	2.24	4.36	3.76	1.58	8.97	2.16	3.17	1.48	3.34	3.55
15	Ix_SR1	SilentIntronRegion	0	9.67	5.11	6.48	7.25	1.97	7.09	4.62	3.72	22.35	12.79	2.65	5.50	5.87	4.45	12.39	4.42	10.91	4.92	3.44	2.24	4.37	3.77	1.58	8.99	2.17	3.18	1.48	3.35	3.56
16	Ix	Intron	0	6.80	2.72	2.17	2.93	1.50	4.08	2.61	2.01	9.22	7.78	2.19	2.48	1.94	2.10	4.98	1.56	3.72	2.20	3.92	1.29	2.97	0.68	0.56	2.79	1.32	1.39	0.88	1.33	1.41
17	Ix_SR1	SilentIntronRegion	0	6.89	2.76	2.20	2.98	1.52	4.15	2.66	2.04	9.32	7.91	2.23	2.52	1.98	2.13	5.06	1.59	3.78	2.24	3.98	1.31	3.02	0.69	0.56	2.83	1.34	1.42	0.89	1.36	1.44
18	Ix_AR1	ActiveIntronRegion	0	1.53	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.05	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.22	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
19	Ix	Intron	0	3.39	1.32	0.69	2.10	0.57	1.93	0.95	1.51	4.14	3.64	0.77	1.41	0.64	0.64	2.05	1.60	0.96	0.92	3.37	1.48	2.34	0.63	0.32	1.51	0.34	1.47	0.21	0.29	0.27
20	Ix_SR1	SilentIntronRegion	0	3.41	1.33	0.69	2.11	0.58	1.95	0.95	1.52	4.16	3.66	0.77	1.42	0.65	0.64	2.06	1.61	0.97	0.93	3.39	1.49	2.35	0.64	0.32	1.52	0.34	1.48	0.22	0.29	0.28
21	I1_AR1	ActiveIntronRegion	1	45.66	12.95	81.32	117.82	23.31	30.11	52.76	14.42	31.44	34.36	15.12	17.26	38.20	13.09	18.97	25.60	14.65	30.66	14.70	21.60	18.13	47.65	31.30	19.80	7.37	25.23	8.75	14.71	21.59
22	E2_Aa	NovelBoundary	0	3.01	4.07	1.32	0.00	0.00	0.00	0.00	2.54	0.00	4.03	0.00	2.80	0.00	1.20	0.00	0.00	0.00	0.00	8.09	0.00	1.97	2.24	2.07	0.00	3.60	2.02	0.00	4.49	0.00
23	ER2a	ExonRegion	0	7.38	12.66	20.36	17.42	45.27	5.18	13.04	9.37	22.77	16.90	7.67	11.97	10.66	4.56	8.73	8.93	16.50	11.24	10.78	2.07	8.98	28.90	10.80	7.40	4.12	22.51	6.84	22.25	4.74
24	E2_Ab	KnownBoundary	0	11.38	20.94	38.07	48.75	102.28	14.12	26.43	14.68	54.60	30.32	14.90	23.43	21.69	7.56	25.51	14.61	29.96	29.28	32.37	2.98	16.93	47.06	21.28	14.12	7.12	47.25	21.97	44.57	6.64
25	ER2b	ExonRegion	0	84.22	101.42	252.48	687.30	218.56	92.07	146.61	82.24	127.63	149.97	134.87	139.03	181.89	105.93	87.98	143.71	192.13	193.56	149.18	74.43	58.77	280.98	214.70	106.44	95.20	339.33	132.24	402.23	139.50
26	E2_Da	NovelBoundary	0	2.83	0.00	1.05	0.00	6.48	0.00	0.00	0.00	2.92	0.00	1.42	1.54	0.00	2.97	0.00	0.00	2.21	4.62	0.00	0.00	2.01	0.00	0.00	2.99	0.00	2.10	0.00	0.00	0.00
27	E2a_E3a	KnownJunction	0	5.78	4.46	47.11	66.65	19.60	17.80	16.19	7.02	17.11	22.25	1.49	18.28	19.04	22.93	15.55	7.11	69.60	23.12	8.09	11.25	10.95	15.95	16.40	7.72	16.06	38.37	15.61	45.88	15.88
28	E2a_E7a	KnownJunction	0	35.57	147.07	303.81	596.82	213.69	55.67	96.46	59.72	150.53	158.46	128.53	159.12	239.15	103.45	162.25	113.29	209.02	199.58	250.64	66.41	51.22	167.49	240.58	110.72	167.26	415.02	152.32	392.75	191.51
29	I2	Intron	0	2.34	0.39	0.40	1.73	0.00	0.00	0.49	0.22	1.90	1.40	1.15	0.38	0.31	1.37	0.00	1.20	1.99	1.86	0.00	0.91	0.35	0.22	0.22	0.78	0.69	0.96	0.00	0.99	0.00
30	I2_AR1	ActiveIntronRegion	0	2.85	0.76	0.00	0.00	0.00	0.00	0.00	0.43	1.90	1.70	0.63	0.28	0.23	1.36	0.00	1.17	1.72	2.27	0.00	0.65	0.27	0.43	0.43	0.51	1.34	1.39	0.00	1.21	0.00
31	I2_AR2	ActiveIntronRegion	0	2.35	0.00	1.09	4.66	0.00	0.00	1.31	0.00	2.49	1.41	2.21	0.61	0.52	1.79	0.00	1.61	2.97	1.25	0.00	1.54	0.55	0.00	0.00	1.40	0.00	0.64	0.00	0.98	0.00
32	E3_Aa	NovelBoundary	0	2.42	0.00	2.47	0.00	0.00	1.73	0.00	0.00	5.76	0.00	1.61	0.00	1.24	0.00	18.34	0.00	4.43	0.00	0.00	0.00	0.00	2.48	0.00	5.98	0.00	1.67	0.00	0.00	0.00
33	ER3a	ExonRegion	0	2.69	2.22	18.44	29.65	6.46	5.09	8.47	1.27	7.94	6.50	0.43	8.14	13.67	8.24	2.88	2.36	26.65	9.96	4.65	2.92	3.01	6.38	5.35	7.70	5.16	18.31	2.65	15.93	8.33
34	E3_Da	NovelBoundary	0	5.60	0.00	2.19	0.00	6.34	3.72	0.00	4.78	3.93	1.84	0.00	4.46	3.18	6.43	0.00	3.52	4.88	4.62	0.00	0.00	5.94	0.00	0.00	8.13	1.89	2.10	0.00	1.89	1.52
35	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.54	1.37	2.04	0.00	1.63	0.00	1.24	0.00	0.00	2.14	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.53	0.00	1.85
36	E4_Aa	NovelBoundary	0	19.82	13.96	45.89	0.00	5.60	7.44	12.87	7.17	24.00	16.34	10.44	36.66	33.37	24.55	26.71	3.82	131.25	10.02	0.00	8.19	7.74	2.29	6.94	17.29	8.30	14.12	47.81	32.26	33.15
37	ER4a	ExonRegion	0	12.31	10.06	29.93	27.97	6.73	24.95	11.49	11.00	11.30	24.17	28.65	10.22	12.32	11.11	22.98	9.37	34.91	29.18	33.74	7.86	14.42	2.96	6.23	13.89	13.79	15.12	17.05	14.06	8.79
38	E4_Da	NovelBoundary	0	84.47	113.04	23.64	43.79	83.56	63.42	62.88	47.73	69.92	139.61	68.27	60.81	51.08	58.87	127.76	86.67	45.58	0.00	16.18	41.02	102.56	54.84	89.34	92.59	46.83	97.20	120.27	131.78	31.96
39	E4a_E5b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
40	I4	Intron	0	3.98	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.04	4.02	0.00	0.00	0.00	0.00	0.00	0.00	0.00	5.36	2.96	2.56	2.65	1.67	0.00	1.99	1.33	1.46	0.00	1.51	0.00
41	I4_SR1	SilentIntronRegion	0	3.98	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.04	4.02	0.00	0.00	0.00	0.00	0.00	0.00	0.00	5.36	2.96	2.56	2.65	1.67	0.00	1.99	1.33	1.46	0.00	1.51	0.00
42	E5_Aa	NovelBoundary	0	116.91	126.71	103.05	29.55	70.30	115.26	111.51	175.18	206.59	119.80	79.31	139.15	72.80	119.42	162.05	144.05	244.34	9.50	0.00	112.88	155.59	43.61	62.99	106.59	89.48	138.10	156.35	167.23	148.40
43	E5_Ab	NovelBoundary	0	253.11	184.30	99.66	114.10	184.21	187.46	164.66	171.14	394.09	339.22	154.09	194.88	158.43	214.17	623.47	171.05	503.08	53.68	16.18	165.07	190.12	175.02	131.50	244.53	238.87	355.72	211.46	350.51	172.40
44	ER5a	ExonRegion	0	0.00	1.26	0.95	0.56	0.00	0.63	0.00	1.70	0.09	0.00	0.92	0.00	0.00	0.21	1.29	0.97	2.00	0.42	0.35	0.22	0.88	0.28	0.00	0.00	1.87	0.60	0.85	1.25	0.00
45	ER5b	ExonRegion	0	1.25	9.12	7.39	10.56	2.21	4.89	1.12	11.35	8.49	8.98	6.98	5.15	2.89	4.38	10.42	3.94	7.37	14.10	6.03	0.00	3.21	3.20	2.56	8.37	8.81	8.69	10.33	9.92	4.14
46	E5_Da	KnownBoundary	0	10.91	23.75	23.42	29.12	12.97	13.16	14.88	24.83	40.65	41.46	21.45	27.02	19.74	12.47	24.52	9.33	30.46	46.88	24.05	0.00	24.43	4.67	14.58	30.80	22.84	18.58	26.79	27.54	18.65
47	E5a_E5c	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
48	ER5c	ExonRegion	0	18.71	23.67	17.84	31.31	12.90	18.87	5.74	19.12	26.29	28.72	13.76	21.38	12.34	16.43	49.45	21.57	25.82	16.82	12.07	6.97	18.47	5.86	8.48	16.57	19.34	21.92	28.74	29.69	10.98
49	E5_Ac	KnownBoundary	0	0.00	0.00	1636.24	0.00	0.00	0.00	0.00	0.00	820.66	0.00	0.00	575.71	601.73	571.82	0.00	0.00	2406.89	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	790.77
50	E5_Ad	KnownBoundary	0	228.63	139.22	1144.64	159.61	95.05	204.77	120.38	149.20	1490.62	258.05	124.80	712.34	662.65	631.77	167.23	197.14	2836.06	0.00	0.00	106.52	230.55	109.73	203.70	227.84	247.66	317.01	181.00	432.56	747.43
51	ER5d	ExonRegion	0	49.30	67.89	13.46	19.50	34.87	54.53	14.11	53.39	63.67	56.79	16.26	30.92	23.38	24.49	104.54	46.40	18.70	2.73	0.00	19.67	41.37	15.02	19.89	25.81	31.45	68.63	32.97	56.51	18.34
52	ER5e	ExonRegion	0	21.55	25.51	23.01	14.66	6.17	19.25	9.92	22.70	35.73	40.17	19.94	21.13	19.28	27.34	43.94	18.24	50.54	34.98	22.52	11.05	11.33	7.36	11.27	30.20	21.22	31.17	26.12	41.25	12.01
53	E5_Db	NovelBoundary	0	2.54	14.35	12.76	0.00	12.97	9.05	2.35	0.00	8.40	8.75	0.00	7.26	5.00	12.90	0.00	0.00	34.03	4.62	0.00	7.53	3.49	0.00	0.00	10.65	6.71	8.50	0.00	12.31	12.58
54	E5b_E7a	KnownJunction	0	4.66	14.54	37.30	9.71	6.19	5.60	5.15	34.79	20.65	20.85	15.37	22.05	12.99	28.18	0.00	3.21	20.01	27.74	16.18	0.00	7.90	2.43	9.21	9.15	13.41	8.63	24.35	35.05	4.75
55	I5	Intron	0	8.78	7.19	6.89	5.44	2.59	9.63	3.67	3.77	10.68	13.51	5.48	5.46	3.95	9.93	15.95	10.58	24.55	12.91	11.88	4.62	6.21	1.41	1.97	7.62	9.33	7.08	1.34	4.46	4.20
56	I5_SR1	SilentIntronRegion	0	7.87	6.34	6.68	5.11	1.74	8.04	3.81	3.35	7.47	12.26	4.20	4.36	4.29	8.38	11.73	7.88	19.80	12.52	12.53	4.45	5.50	1.16	1.74	5.68	8.11	7.01	1.31	3.90	4.46
57	I5_AR1	ActiveIntronRegion	0	11.04	9.28	7.45	6.26	4.69	13.57	3.34	4.83	18.56	16.64	8.63	8.18	3.11	13.75	26.33	17.25	36.25	13.91	10.31	5.05	7.97	2.05	2.53	12.39	12.35	7.27	1.44	5.84	3.56
58	ER6a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.23	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
59	I6	Intron	0	8.48	2.44	7.35	6.30	4.29	6.35	5.76	7.69	8.26	12.38	1.57	7.18	2.99	9.06	23.85	9.51	20.67	10.80	14.05	4.51	3.76	1.19	1.19	6.15	8.48	6.91	1.62	7.17	2.35
60	I6_AR1	ActiveIntronRegion	0	11.68	2.46	10.24	5.28	6.92	9.34	8.24	9.37	11.51	17.34	2.46	11.03	4.23	13.57	29.71	12.72	30.37	13.53	15.59	4.57	5.62	1.87	1.24	7.29	12.05	9.29	2.61	8.55	2.65
61	I6_SR1	SilentIntronRegion	0	3.48	2.56	2.81	8.56	0.00	1.56	1.82	5.30	3.17	4.56	0.12	0.94	1.03	1.79	15.16	4.57	5.14	6.79	11.92	4.73	0.78	0.09	1.19	4.59	2.84	3.24	0.00	5.27	2.01
62	E7_Aa	NovelBoundary	0	13.57	16.68	18.14	0.00	14.44	6.91	5.15	9.51	12.85	14.42	0.00	23.40	6.31	16.02	16.14	20.04	61.36	23.12	8.09	7.77	1.64	0.00	0.00	22.31	15.65	12.06	7.31	14.42	11.92
63	ER7a	ExonRegion	0	80.64	161.06	195.33	227.22	85.57	112.13	77.13	87.12	188.41	171.80	141.69	100.62	184.94	124.33	155.45	96.85	145.54	160.42	117.33	75.84	60.91	193.48	142.51	205.92	162.12	231.76	115.49	239.68	95.98
64	ER7b	ExonRegion	0	2.14	0.00	3.37	21.94	0.00	1.37	2.02	3.68	6.74	4.33	1.19	1.24	6.50	3.63	5.60	7.59	4.01	13.65	0.00	0.00	0.00	14.42	3.62	4.30	11.43	1.57	16.48	6.52	1.34
65	ER7c	ExonRegion	0	0.54	0.00	2.24	9.14	0.00	0.69	2.02	3.68	3.09	1.44	0.00	0.00	4.22	1.36	5.60	0.63	1.75	2.05	0.00	0.00	0.00	3.61	1.36	3.23	4.29	0.00	0.00	4.89	1.34
66	IG45	Intergenic	0	1.08	4.14	1.37	0.95	0.77	1.89	4.85	0.78	3.67	3.51	2.30	1.53	1.68	1.70	6.83	1.15	5.09	2.71	2.03	1.22	2.22	1.05	0.72	5.80	2.98	1.41	1.94	2.84	1.34
67	IG45_SR1	SilentIntergenicRegion	0	3.05	5.34	1.34	2.04	0.53	1.07	1.34	0.00	3.02	2.88	2.26	1.29	0.55	0.64	2.88	1.22	8.55	4.25	1.67	0.57	1.72	0.32	1.03	1.41	0.81	1.34	0.00	4.01	1.14
68	IG45_AR1	ActiveIntergenicRegion	0	0.94	5.11	1.08	1.57	1.29	1.74	11.25	1.11	4.10	3.89	4.12	2.30	2.41	2.24	9.10	1.68	5.52	3.27	1.52	1.78	2.87	0.97	0.26	4.80	2.43	1.03	2.44	4.13	0.29
69	IG45_SR2	SilentIntergenicRegion	0	0.00	2.32	4.13	0.00	1.98	1.07	1.02	1.33	2.35	2.25	0.18	0.39	1.05	1.51	9.56	1.37	6.09	3.42	6.82	0.20	2.45	0.00	0.00	3.76	2.80	1.12	1.34	2.73	2.11
70	IG45_AR2	ActiveIntergenicRegion	0	0.32	1.42	1.12	0.00	0.00	2.86	1.26	0.00	5.20	3.31	0.65	0.64	1.70	1.14	6.38	0.80	3.93	2.72	1.59	0.57	1.12	1.13	0.38	5.32	1.10	0.70	0.76	1.90	1.70
71	IG45_AR3	ActiveIntergenicRegion	0	3.10	1.16	0.00	0.00	0.00	1.49	2.92	0.67	3.83	3.19	1.29	2.20	2.11	1.87	1.67	0.00	3.69	2.79	3.47	1.00	0.52	0.58	1.31	6.22	5.17	4.55	0.66	1.75	0.97
72	IG45_SR4	SilentIntergenicRegion	0	1.21	8.75	2.83	1.35	0.92	3.10	1.52	1.39	3.59	5.71	2.24	1.86	1.95	2.04	8.80	1.40	7.02	2.18	1.20	2.59	4.03	3.05	2.72	14.57	7.80	2.07	5.86	2.45	4.77