Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	C12orf52	Gene	0	136.23	66.31	137.01	190.14	153.65	91.35	138.13	193.89	115.72	123.69	97.58	99.56	115.63	101.88	162.48	110.62	91.05	156.77	190.08	227.47	66.29	201.40	220.38	130.37	132.50	105.75	106.85	584.68	70.00
2	299731	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
3	266813	Transcript	0	6.34	18.10	8.09	26.76	37.10	5.24	10.21	12.93	29.86	13.42	12.08	12.05	10.56	5.60	23.59	13.73	6.12	10.63	42.27	26.07	6.31	8.98	9.31	12.27	23.48	9.66	34.18	82.75	5.43
4	436053	Transcript	0	13.00	6.35	15.56	24.86	21.25	9.62	12.09	21.23	9.51	10.68	10.95	10.31	11.60	12.40	12.32	10.97	10.08	13.83	13.28	24.55	5.71	24.04	15.91	11.62	11.91	8.91	6.11	47.27	6.98
5	IG22	Intergenic	0	8.85	3.43	13.12	62.17	19.16	5.68	9.16	8.36	4.05	10.14	2.95	5.35	6.83	9.43	11.02	16.91	5.86	26.92	11.21	19.03	1.47	21.22	15.68	8.88	7.67	8.76	6.05	41.07	7.88
6	IG22_AR1	ActiveIntergenicRegion	0	10.36	4.02	15.36	72.78	22.43	6.65	10.72	9.79	4.74	11.86	3.45	6.26	7.99	11.02	12.90	19.71	6.86	31.51	13.13	22.25	1.72	24.84	18.36	10.40	8.98	10.26	7.08	48.01	9.23
7	ER1a	ExonRegion	0	69.10	31.76	68.54	153.13	117.89	58.99	81.82	71.82	32.29	75.15	59.29	62.29	49.97	53.73	96.97	95.07	51.11	124.59	93.42	167.46	34.83	121.69	151.72	52.56	68.10	54.89	44.72	343.15	37.36
8	E1_Da	NovelBoundary	0	0.00	0.00	2.57	0.00	0.00	0.00	0.00	0.00	2.77	3.48	0.00	0.00	0.00	0.95	0.00	0.00	0.00	9.25	0.00	0.00	0.00	2.29	0.00	0.00	0.00	0.00	0.00	1.98	0.00
9	E1a_E2a	KnownJunction	0	111.42	47.31	98.66	240.07	114.36	90.62	140.58	162.54	94.62	138.53	161.62	154.85	109.10	111.47	140.12	116.74	134.31	169.14	234.68	292.84	55.67	175.31	269.49	109.94	169.65	132.60	143.18	894.54	90.03
10	E1a_E3b	NovelJunction	0	5.84	3.97	5.43	0.00	0.00	3.15	7.27	1.99	2.95	11.94	0.00	1.87	3.34	4.43	0.00	0.00	4.41	0.00	0.00	0.00	0.00	7.20	11.92	2.99	1.93	15.32	2.09	4.13	2.84
11	I1	Intron	0	1.05	0.00	1.64	3.52	0.00	0.67	0.00	0.90	0.00	0.71	0.00	1.51	0.64	0.44	0.00	0.00	0.00	0.94	1.57	0.00	0.00	0.00	0.00	1.05	0.00	0.00	0.90	0.00	0.00
12	I1_AR1	ActiveIntronRegion	0	1.06	0.00	1.66	3.55	0.00	0.68	0.00	0.91	0.00	0.71	0.00	1.53	0.64	0.45	0.00	0.00	0.00	0.95	1.58	0.00	0.00	0.00	0.00	1.04	0.00	0.00	0.91	0.00	0.00
13	E2_Aa	NovelBoundary	0	0.00	0.00	3.06	0.00	0.00	3.38	2.92	0.00	1.43	3.75	0.00	1.87	0.00	1.13	0.00	3.37	5.69	0.00	0.00	0.00	0.00	2.29	0.00	3.05	0.00	0.00	0.00	3.68	0.00
14	ER2a	ExonRegion	0	168.94	99.49	169.49	346.58	301.46	141.98	181.60	268.83	118.06	156.09	149.28	142.55	129.69	166.34	183.04	144.35	139.92	183.72	230.37	329.53	75.60	270.81	255.76	169.21	182.58	123.97	163.89	766.85	89.71
15	E2_Da	NovelBoundary	0	0.00	0.00	1.54	0.00	0.00	10.36	0.00	0.00	0.00	0.00	1.42	0.00	1.18	3.26	16.14	6.35	3.53	0.00	0.00	0.00	0.00	0.00	4.53	3.05	1.67	0.00	0.00	1.71	0.00
16	E2a_E3b	KnownJunction	0	192.71	82.02	227.55	466.33	315.08	139.54	184.52	290.98	148.00	172.60	146.53	142.35	144.38	163.14	168.03	170.97	149.64	207.16	218.50	362.06	80.02	324.37	225.02	172.27	199.65	127.50	54.82	706.10	80.85
17	I2_AR1	ActiveIntronRegion	0	1.32	0.00	0.72	0.00	0.00	0.00	1.33	0.00	0.00	0.00	0.00	0.00	1.13	0.00	4.89	1.56	0.00	0.00	0.00	2.33	0.00	1.61	0.00	0.00	0.30	0.00	0.00	3.54	0.00
18	E3_Aa	NovelBoundary	0	0.00	3.68	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.04	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.38	0.00	0.00	0.00	0.00	0.00	0.00	0.00
19	E3_Ab	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	5.72	2.19	4.90	2.04	0.00	0.00	0.00	1.06	0.00	0.00	2.50	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.98
20	ER3a	ExonRegion	0	13.00	6.35	15.56	24.86	21.25	9.62	12.09	21.23	9.51	10.68	10.95	10.31	11.60	12.40	12.32	10.97	10.08	13.83	13.28	24.55	5.71	24.04	15.91	11.62	11.91	8.91	6.11	47.27	6.98
21	ER3b	ExonRegion	0	200.38	71.88	194.00	293.11	215.04	110.74	207.30	294.85	130.63	150.39	126.13	161.75	158.95	159.89	202.63	148.19	154.65	210.91	230.51	299.16	79.24	303.06	290.42	166.53	167.36	153.67	122.46	783.18	101.20
22	E3_Da	NovelBoundary	0	0.00	0.00	2.24	0.00	0.00	1.57	0.00	4.63	4.63	0.00	5.44	1.63	1.34	3.59	16.74	0.00	1.96	0.00	8.09	2.98	2.01	12.93	0.00	9.03	1.63	0.00	0.00	8.76	3.57
23	E3a_E4a	KnownJunction	0	251.45	91.42	254.23	395.15	421.92	138.97	188.98	303.42	174.74	177.32	137.55	169.97	130.69	152.19	220.25	189.10	148.49	269.58	291.33	369.25	83.11	298.32	336.77	230.05	207.42	149.38	207.64	913.91	117.76
24	I3	Intron	0	1.12	0.80	0.79	0.75	0.00	1.94	0.63	0.77	1.20	1.13	0.31	0.71	0.81	0.85	4.33	2.17	1.72	2.64	1.67	0.78	1.72	0.57	0.28	1.13	0.60	0.49	0.00	4.52	0.35
25	I3_SR1	SilentIntronRegion	0	1.12	0.80	0.79	0.75	0.00	1.95	0.63	0.77	1.21	1.14	0.31	0.71	0.82	0.86	4.34	2.18	1.72	2.64	1.68	0.79	1.72	0.57	0.28	1.13	0.60	0.49	0.00	4.53	0.35
26	E4_Aa	NovelBoundary	0	2.65	0.00	1.37	0.00	0.00	1.61	0.00	0.00	1.28	1.68	0.00	1.48	0.00	0.00	16.74	2.83	6.93	4.62	0.00	0.00	1.68	0.00	0.00	2.51	0.00	0.00	0.00	4.00	0.00
27	ER4a	ExonRegion	0	175.54	69.08	164.26	187.95	130.89	88.54	169.56	236.80	111.74	140.38	72.34	100.40	134.86	110.69	211.31	114.96	95.78	198.22	195.22	244.75	71.94	253.44	302.70	125.15	130.40	143.45	88.19	717.29	72.79
28	E4_Da	KnownBoundary	0	195.42	47.99	178.94	135.45	70.74	43.93	112.26	214.14	64.01	96.51	51.72	80.93	93.97	106.57	269.48	116.74	86.12	165.16	129.48	219.07	74.20	280.76	157.94	162.16	93.88	95.05	91.05	656.45	67.22
29	E4a_E4b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
30	ER4b	ExonRegion	0	201.46	71.51	200.04	245.27	206.38	114.64	170.76	241.68	136.02	179.53	104.75	115.61	164.40	128.41	215.54	139.05	114.22	222.86	244.45	286.71	87.13	275.14	312.30	181.90	160.48	145.54	131.78	786.80	96.67
31	E4_Ab	KnownBoundary	0	198.96	64.57	181.43	243.73	162.26	105.24	187.66	276.55	124.67	194.73	91.30	110.03	166.93	129.73	286.02	145.19	97.17	212.68	161.85	244.13	69.83	260.20	289.64	205.77	169.69	155.48	74.25	698.01	70.38
32	ER4c	ExonRegion	0	171.30	87.24	164.89	201.41	125.38	77.52	118.38	238.75	114.37	161.70	101.28	104.90	144.85	116.70	210.73	137.17	96.10	165.83	219.92	277.21	60.66	198.21	235.10	157.33	143.64	119.20	107.47	558.80	58.03
33	E4_Db	KnownBoundary	0	118.09	92.68	180.16	207.93	178.17	93.00	132.05	212.55	144.86	168.69	105.18	96.38	127.95	98.09	241.97	137.09	103.02	157.20	234.68	296.31	68.99	184.16	226.25	192.67	144.00	120.33	110.33	533.65	63.91
34	ER4d	ExonRegion	0	102.83	72.88	113.29	113.18	109.07	88.51	110.51	162.67	150.48	111.22	101.00	74.22	106.53	74.13	145.90	86.52	61.41	117.69	199.23	185.23	70.71	147.24	174.13	133.90	134.31	83.68	121.05	500.88	62.04
35	E4_Dc	KnownBoundary	0	13.86	15.22	23.62	9.06	44.21	9.90	14.76	22.10	60.48	13.10	21.92	25.15	21.53	11.10	53.02	23.18	19.18	0.00	56.42	31.51	11.95	10.02	15.71	26.02	27.81	16.44	42.29	109.23	20.63
36	ER4e	ExonRegion	0	6.34	18.10	8.09	26.76	37.10	5.24	10.21	12.93	29.86	13.42	12.08	12.05	10.56	5.60	23.59	13.73	6.12	10.63	42.27	26.07	6.31	8.98	9.31	12.27	23.48	9.66	34.18	82.75	5.43
37	IG23	Intergenic	0	2.19	1.01	2.20	1.40	5.00	2.61	0.59	2.87	3.22	1.90	0.64	4.32	1.20	4.48	6.76	5.46	4.00	10.18	10.43	8.12	2.36	2.81	5.11	4.09	3.20	1.22	6.87	27.55	3.62
38	IG23_AR1	ActiveIntergenicRegion	0	3.21	1.06	2.65	2.53	6.45	1.94	0.71	2.59	2.72	2.29	0.21	5.38	1.55	4.50	7.93	6.50	4.87	8.99	12.38	8.47	3.02	2.06	5.73	3.98	4.78	1.38	6.94	30.30	5.07
39	IG23_AR2	ActiveIntergenicRegion	0	1.06	1.09	1.87	0.00	3.64	3.92	0.50	3.66	4.38	1.61	1.33	3.44	0.88	5.06	6.05	4.75	3.33	12.55	8.72	8.75	1.77	4.25	4.94	4.80	1.42	1.17	7.73	27.51	2.08