Order SeqName SeqType IsAE ABC_RG012 ABC_RG016 ABC_RG015 ABC_RG046 ABC_RG047 ABC_RG048 ABC_RG049 ABC_RG058 ABC_RG059 ABC_RG061 ABC_RG073 ABC_RG074 ABC_RG086 GCB_RG003 GCB_RG005 GCB_RG006 GCB_RG007 GCB_RG010 GCB_RG014 GCB_RG045 GCB_RG050 GCB_RG055 GCB_RG062 GCB_RG063 GCB_RG064 GCB_RG071 GCB_RG072 GCB_RG069 GCB_RG085 1 ERP29 Gene 0 634.59 889.71 1233.66 1035.43 1136.61 477.05 701.53 2074.89 934.00 809.30 1177.27 508.51 1147.88 657.16 800.45 475.12 757.43 573.96 485.61 392.67 300.38 884.29 642.40 686.15 693.87 605.35 637.08 921.98 401.50 2 261735 Transcript 0 896.59 634.00 752.25 722.47 1084.35 547.56 686.11 2414.51 932.73 708.82 917.05 527.63 1077.47 642.38 508.38 445.11 729.06 626.85 343.46 390.15 322.96 1371.13 672.90 654.73 638.44 575.61 599.43 893.17 379.02 3 455836 Transcript 0 158.85 34.32 36.95 59.53 76.34 35.30 35.13 416.14 49.88 50.61 33.09 26.87 48.37 76.06 42.06 38.86 54.09 56.25 40.46 90.80 17.05 179.06 11.72 154.56 58.08 42.40 15.80 46.19 18.36 4 392626 Transcript 0 0.00 0.44 0.15 1.95 1.33 0.18 0.67 0.74 0.45 0.10 0.16 0.00 0.52 0.30 1.12 1.01 0.00 0.00 0.00 0.75 0.10 0.60 0.48 0.43 0.38 0.10 0.00 0.54 0.09 5 ER1a ExonRegion 0 42.28 58.38 62.91 320.79 600.89 76.59 101.34 96.05 86.89 78.49 58.82 40.19 67.08 23.79 30.17 75.37 40.96 88.00 65.11 20.13 46.75 85.58 106.60 22.85 30.70 52.41 35.20 103.25 24.87 6 E1_Ab KnownBoundary 0 261.60 329.24 348.61 1967.54 1791.15 486.77 443.30 508.06 520.52 367.66 300.65 187.20 370.10 90.71 154.07 454.40 234.57 415.99 323.25 117.43 269.38 439.01 507.96 92.12 156.47 293.62 178.26 295.02 109.67 7 ER1b ExonRegion 0 447.90 404.02 1185.58 1847.38 1302.48 348.07 505.04 1154.06 403.46 388.26 453.62 342.30 624.27 355.23 327.17 432.50 633.86 446.69 277.06 269.03 204.28 891.20 499.49 264.03 262.31 400.32 272.97 667.48 264.67 8 E1_Da NovelBoundary 0 2.89 4.75 5.51 0.00 25.20 1.65 0.00 2.09 0.00 5.19 0.00 1.17 0.00 5.47 0.00 5.81 4.77 0.00 0.00 0.00 0.00 2.48 0.00 0.00 3.71 0.00 0.00 0.00 0.00 9 E1a_E2a KnownJunction 0 1258.16 611.08 200.99 519.82 503.13 520.76 355.65 2572.95 962.24 397.14 404.99 247.25 693.60 539.18 242.37 236.15 248.43 347.40 291.33 356.85 299.54 2075.33 304.46 685.49 493.76 225.08 234.52 244.74 199.01 10 E1a_E4a KnownJunction 0 158.85 34.32 36.95 59.53 76.34 35.30 35.13 416.14 49.88 50.61 33.09 26.87 48.37 76.06 42.06 38.86 54.09 56.25 40.46 90.80 17.05 179.06 11.72 154.56 58.08 42.40 15.80 46.19 18.36 11 I1 Intron 0 15.28 18.82 12.33 10.17 12.84 18.25 10.18 15.32 14.62 18.68 14.65 7.72 5.38 19.31 14.86 16.29 35.40 11.18 11.66 5.33 6.61 2.45 1.54 8.71 9.03 6.86 2.32 11.87 3.00 12 I1_AR1 ActiveIntronRegion 0 10.17 1.29 9.39 2.86 12.73 6.92 4.24 7.33 2.24 6.30 2.46 4.08 1.30 8.09 8.57 12.66 20.91 8.02 2.55 2.47 1.48 1.20 1.20 2.42 3.16 4.38 0.49 6.30 1.16 13 I1_SR1 SilentIntronRegion 0 13.81 3.71 5.21 4.13 6.22 9.97 5.34 7.49 2.75 7.59 6.68 3.42 4.10 8.57 7.97 12.87 27.45 9.39 5.52 5.34 2.14 0.52 1.04 3.44 4.29 2.74 4.22 6.11 0.39 14 I1_AR3 ActiveIntronRegion 0 15.84 22.06 21.42 7.07 5.41 31.16 15.15 21.55 18.85 33.44 23.46 11.02 8.69 30.78 14.72 15.16 48.92 11.63 16.14 10.78 10.72 2.44 2.23 7.68 9.33 13.94 2.48 20.28 2.07 15 I1_SR2 SilentIntronRegion 0 16.46 23.53 11.55 13.18 15.35 18.54 10.82 16.43 17.61 19.05 16.09 8.19 5.63 20.19 17.03 17.75 36.25 11.99 13.26 4.66 7.23 2.94 1.50 10.91 10.77 6.15 2.50 11.70 3.91 16 E2_Aa NovelBoundary 0 21.23 28.12 18.86 39.47 20.04 15.85 28.78 34.34 34.81 23.17 20.12 18.04 8.53 20.47 43.45 39.17 43.15 14.64 16.18 8.27 19.13 2.19 6.65 8.61 13.75 11.80 9.54 8.40 4.62 17 ER2a ExonRegion 0 953.89 761.46 641.73 708.91 918.11 778.21 1121.96 2863.24 1127.63 1128.73 1352.90 695.20 1437.75 776.37 765.15 696.72 944.13 805.99 496.51 465.20 486.77 1415.81 1015.28 658.25 860.14 836.29 580.36 1108.71 507.79 18 E2_Da NovelBoundary 0 11.44 12.70 6.08 8.84 0.00 16.34 5.84 21.85 7.43 5.35 8.00 6.11 5.76 12.03 18.34 0.00 30.97 18.49 8.09 4.13 0.00 0.00 4.38 2.81 7.12 0.00 0.00 6.07 2.94 19 E2a_E4a KnownJunction 1 477.72 529.45 1414.02 938.69 1831.83 343.70 580.73 1807.35 708.33 600.58 993.26 640.44 1101.05 611.59 517.63 402.46 994.62 727.17 242.55 348.41 182.58 622.25 698.95 620.47 561.42 665.47 983.41 1326.06 430.26 20 I2 Intron 0 11.99 10.54 11.31 6.53 6.99 13.59 7.08 13.65 12.33 17.85 13.32 5.86 3.12 13.19 11.83 9.97 26.03 10.57 4.99 1.69 6.68 0.70 2.12 8.96 5.20 5.32 0.48 10.60 2.88 21 I2_SR1 SilentIntronRegion 0 12.05 10.60 11.37 6.56 7.03 13.66 7.12 13.72 12.39 17.94 13.38 5.89 3.13 13.26 11.89 10.02 26.16 10.62 5.01 1.70 6.71 0.71 2.13 9.00 5.23 5.34 0.48 10.66 2.89 22 ER3a ExonRegion 0 0.00 0.44 0.15 1.95 1.33 0.18 0.67 0.74 0.45 0.10 0.16 0.00 0.52 0.30 1.12 1.01 0.00 0.00 0.00 0.75 0.10 0.60 0.48 0.43 0.38 0.10 0.00 0.54 0.09 23 I3 Intron 0 7.67 9.64 5.85 9.82 6.69 9.42 4.91 11.49 10.97 14.51 10.06 5.49 3.75 10.05 10.77 4.94 17.04 6.18 6.57 1.83 4.56 1.24 1.24 7.86 3.59 5.38 1.12 5.83 2.19 24 I3_SR1 SilentIntronRegion 0 7.79 9.80 5.95 9.99 6.80 9.57 4.96 11.66 11.14 14.74 10.19 5.58 3.80 10.20 10.86 5.01 17.31 6.29 6.68 1.83 4.63 1.26 1.26 7.97 3.65 5.47 1.13 5.91 2.23 25 E4_Aa NovelBoundary 0 5.31 4.36 6.75 0.00 12.38 3.30 11.04 16.57 19.86 16.98 7.18 1.60 1.50 10.77 44.25 6.58 16.41 0.00 0.00 0.00 7.58 2.48 1.92 13.76 1.89 4.08 11.63 17.43 5.94 26 I3_AR1 ActiveIntronRegion 0 0.00 0.00 0.00 0.00 0.00 0.15 2.02 1.64 1.00 0.48 2.78 0.14 0.72 1.31 5.60 1.12 1.34 0.00 0.00 2.19 0.79 0.00 0.00 1.67 0.00 0.00 0.00 1.09 0.00 27 ER4a ExonRegion 0 687.86 1071.84 1450.63 1044.75 1209.73 503.07 744.80 2331.60 1083.06 912.84 1387.07 561.96 1309.57 757.55 961.41 498.77 832.72 618.52 562.99 443.63 319.49 905.73 676.84 826.51 810.50 668.44 765.98 1028.75 450.53 28 IG8 Intergenic 0 0.78 1.85 0.85 0.73 0.69 2.78 1.35 1.86 5.76 4.82 4.41 2.18 1.59 2.25 5.56 3.57 5.95 0.94 1.94 0.92 2.34 0.95 1.76 1.87 2.46 0.92 2.45 2.01 0.68 29 IG8_AR1 ActiveIntergenicRegion 0 0.00 1.95 1.87 0.00 4.61 3.72 0.52 1.23 2.12 4.60 2.07 0.00 0.72 0.34 0.00 0.00 2.49 0.00 0.50 2.08 0.00 1.00 0.80 2.63 2.96 0.00 1.42 0.00 0.80 30 IG8_SR1 SilentIntergenicRegion 0 1.51 5.02 1.01 0.00 1.05 6.23 1.03 2.35 5.86 6.47 10.78 4.70 4.65 3.45 3.86 5.17 8.78 0.83 6.01 1.89 4.75 2.17 1.37 2.22 5.21 0.67 3.56 4.58 1.17 31 IG8_AR2 ActiveIntergenicRegion 0 4.29 6.57 0.00 0.00 0.00 8.25 3.70 2.76 12.36 11.31 10.12 6.18 3.90 2.12 11.20 17.72 8.35 0.00 4.53 0.00 1.43 3.61 0.00 2.15 3.81 0.00 0.92 4.89 1.34 32 IG8_SR2 SilentIntergenicRegion 0 0.74 1.68 0.83 0.77 0.63 2.59 1.37 1.84 5.79 4.73 4.10 2.07 1.44 2.21 5.70 3.50 5.85 0.96 1.75 0.86 2.25 0.88 1.79 1.85 2.31 0.95 2.41 1.90 0.65