Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	DYNLL1	Gene	0	2679.70	1217.16	1246.17	2450.27	2742.93	1535.60	3113.19	2364.07	1407.00	1152.02	1122.30	1299.10	2039.19	1400.83	4188.33	1588.47	1149.64	1338.76	2754.23	3581.50	1330.17	2079.69	1601.86	1643.32	2154.83	1706.41	1757.49	1911.16	1937.79
2	392509	Transcript	0	6.13	3.54	1.91	14.06	10.99	2.19	6.65	8.00	1.92	1.63	2.35	7.09	0.91	2.22	55.27	15.90	2.39	7.71	5.58	48.77	1.16	6.56	10.37	4.00	28.11	0.49	7.42	0.40	9.81
3	242577	Transcript	0	467.93	143.10	613.23	655.06	714.31	166.05	609.34	689.56	310.22	208.72	132.33	356.89	676.88	204.97	1197.31	183.98	246.88	253.65	493.42	439.46	97.31	313.39	207.49	239.44	395.86	420.47	300.32	728.56	679.09
4	392508	Transcript	0	85.35	39.39	93.37	81.74	125.93	29.78	73.59	107.38	43.04	37.30	10.68	47.60	82.74	43.49	151.36	32.03	43.16	57.84	56.49	61.63	19.10	60.00	38.12	34.21	44.89	57.71	59.57	108.32	90.85
5	IG39_AR1	ActiveIntergenicRegion	0	0.83	6.65	0.00	16.69	26.58	12.30	10.20	7.79	3.06	2.25	0.46	7.21	0.00	0.35	18.30	10.51	1.34	7.67	42.29	3.13	3.88	7.02	5.63	1.67	1.05	106.41	0.71	120.47	3.12
6	IG39_SR1	SilentIntergenicRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.26	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.35	2.65	0.00	0.32	0.00	0.00	0.00	0.00	1.84	0.00	0.00	0.00	0.00
7	ER1a	ExonRegion	0	6.53	2.82	2.27	19.28	9.60	2.42	5.23	6.34	0.74	1.58	0.39	2.25	0.54	2.46	38.59	18.64	2.02	10.80	3.07	40.14	2.33	10.64	9.56	2.56	21.94	0.98	5.80	0.80	3.97
8	E1_Da	NovelBoundary	0	3.01	0.00	0.00	0.00	0.00	1.96	4.86	4.78	0.00	0.00	1.61	1.54	0.00	0.00	9.37	6.58	3.78	4.62	0.00	2.98	0.00	0.00	4.28	0.00	0.00	0.00	0.00	1.98	1.39
9	E1a_E3b	KnownJunction	0	5.72	4.27	1.54	8.84	12.38	1.96	8.07	9.65	3.11	1.68	4.30	11.93	1.27	1.97	71.95	13.16	2.77	4.62	8.09	57.39	0.00	2.48	11.18	5.44	34.29	0.00	9.04	0.00	15.65
10	I1_AR1	ActiveIntronRegion	0	3.54	4.01	1.23	7.69	2.41	2.39	4.57	10.04	1.09	0.96	1.17	2.39	1.08	2.34	16.08	1.44	9.44	7.35	2.25	15.68	0.86	2.37	2.38	4.82	9.02	2.59	2.64	2.41	2.10
11	Ix	Intron	0	1.13	1.69	2.64	0.00	5.14	5.78	0.00	1.94	5.30	4.55	1.25	1.62	5.13	2.38	2.43	1.30	0.78	8.10	1.68	1.04	4.50	0.95	6.66	2.26	10.52	1.65	12.52	4.29	0.00
12	Ix_SR1	SilentIntronRegion	0	1.13	1.69	2.64	0.00	5.14	5.78	0.00	1.94	5.30	4.55	1.25	1.62	5.13	2.38	2.43	1.30	0.78	8.10	1.68	1.04	4.50	0.95	6.66	2.26	10.52	1.65	12.52	4.29	0.00
13	I1_SR1	SilentIntronRegion	0	0.00	2.53	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
14	ER2a	ExonRegion	0	1586.50	522.10	1544.70	4676.01	4712.20	469.31	1766.75	1233.00	714.47	381.29	197.79	1091.76	1564.04	577.29	3077.17	1647.63	1232.17	1375.94	1310.83	1707.06	397.04	1489.86	1319.05	413.82	505.56	1081.02	479.61	1386.94	1721.49
15	E2_Da	NovelBoundary	0	8.43	0.00	2.92	0.00	0.00	0.00	2.57	2.44	3.01	0.00	0.00	1.69	1.43	2.19	0.00	0.00	1.01	0.00	0.00	0.00	0.00	2.24	0.00	0.00	0.00	0.00	0.00	4.13	1.91
16	E2a_E3a	KnownJunction	0	37.51	20.75	68.47	45.51	78.84	16.11	49.20	72.76	22.78	27.24	2.72	26.17	46.40	28.94	101.85	24.40	29.15	37.63	24.28	22.82	13.28	29.27	24.53	16.21	11.37	39.87	42.34	63.08	51.34
17	E2a_E3b	KnownJunction	0	467.93	143.10	613.23	655.06	714.31	166.05	609.34	689.56	310.22	208.72	132.33	356.89	676.88	204.97	1197.31	183.98	246.88	253.65	493.42	439.46	97.31	313.39	207.49	239.44	395.86	420.47	300.32	728.56	679.09
18	E2a_E4a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.55	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
19	I2	Intron	0	20.61	1.35	0.00	0.00	4.08	1.72	2.53	1.54	0.00	1.21	0.00	0.00	2.17	2.65	4.22	6.97	0.00	2.42	2.67	10.55	1.79	8.29	1.51	0.90	2.39	0.66	0.00	0.68	0.56
20	I2_AR1	ActiveIntronRegion	0	20.95	1.37	0.00	0.00	4.15	1.75	2.57	1.56	0.00	1.23	0.00	0.00	2.21	2.70	4.29	7.09	0.00	2.46	2.72	10.73	1.82	8.43	1.54	0.91	2.43	0.67	0.00	0.69	0.57
21	E3_Aa	NovelBoundary	0	39.64	8.73	4.98	30.20	57.03	7.06	22.31	7.17	3.11	3.91	1.49	6.75	4.87	13.91	16.14	18.97	15.40	4.62	48.55	51.52	3.89	16.24	5.02	16.81	9.05	7.94	9.94	23.72	16.94
22	E3_Ab	NovelBoundary	1	111.84	45.95	48.26	85.41	112.59	27.55	39.48	58.87	32.58	27.16	10.22	36.38	61.20	40.33	102.45	30.45	31.83	27.74	64.74	81.05	14.40	56.54	25.66	45.58	48.34	26.22	37.87	82.13	59.06
23	ER3a	ExonRegion	1	133.18	58.03	118.27	117.98	173.03	43.44	97.97	142.01	63.29	47.36	18.65	69.02	119.08	58.05	200.88	39.65	57.16	78.05	88.71	100.43	24.91	90.74	51.72	52.20	78.42	75.54	76.80	153.55	130.37
24	ER3b	ExonRegion	0	5879.46	1633.06	502.46	1241.44	1192.52	2687.45	5210.99	5496.51	2794.09	1817.20	1281.34	1747.84	3312.65	1989.66	6418.79	3094.79	1416.34	2645.30	3628.39	6037.49	2561.85	4677.37	2304.03	2356.04	4263.78	3612.03	1608.78	3148.66	3301.27
25	E3_Da	NovelBoundary	0	2.65	0.00	2.72	10.78	0.00	3.80	18.42	6.37	11.24	5.67	0.00	1.51	0.00	0.00	33.49	20.27	15.22	0.00	0.00	15.30	1.64	0.00	0.00	3.05	16.44	0.00	0.00	4.58	10.40
26	E3a_E4a	KnownJunction	0	5074.34	2360.84	620.46	2576.66	2251.10	3162.26	12134.17	5079.06	3242.03	4412.47	3389.14	4104.08	6331.87	3094.59	15229.81	5833.41	3352.40	4275.31	9084.69	5542.17	2671.03	3620.77	6114.69	3203.60	6465.71	6115.61	3571.31	5577.16	6417.23
27	I3	Intron	0	9.12	12.61	5.82	8.08	6.70	14.99	10.56	9.00	10.74	11.68	3.18	6.05	3.67	13.55	29.26	19.72	30.66	12.95	8.43	11.01	4.36	2.35	1.02	12.10	14.93	4.15	5.09	6.13	5.93
28	I3_AR1	ActiveIntronRegion	0	9.13	12.63	5.83	8.09	6.71	15.01	10.58	9.01	10.75	11.70	3.19	6.06	3.67	13.57	29.30	19.74	30.70	12.97	8.44	11.03	4.37	2.35	1.02	12.12	14.95	4.15	5.10	6.14	5.94
29	E4_Aa	NovelBoundary	0	31.09	10.76	4.58	10.35	20.34	42.13	14.70	18.31	26.77	24.49	7.18	11.66	9.71	19.34	16.14	31.06	58.25	13.87	0.00	28.12	12.27	4.67	6.60	35.23	31.56	6.31	0.00	5.80	3.33
30	ER4a	ExonRegion	0	3719.47	2102.16	2144.82	3505.08	4192.62	2522.51	4879.49	3243.23	2095.09	1945.47	2121.94	2038.38	3073.38	2393.39	6468.60	2054.48	1744.83	1725.64	4732.66	5704.23	2113.06	2748.02	2472.65	2901.82	3426.66	2386.57	3382.47	2894.57	2778.37
31	IG40_SR1	SilentIntergenicRegion	0	0.98	0.74	0.00	3.29	0.00	0.32	1.35	0.85	0.84	1.30	2.16	0.28	0.00	0.21	7.82	0.00	0.74	1.03	5.71	1.15	0.98	0.83	0.00	1.48	0.99	0.72	0.42	0.75	0.46
32	IG40_AR1	ActiveIntergenicRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	1.01	0.00	1.12	0.72	3.57	0.00	0.00	0.00	0.00	0.00	1.00	0.00	4.53	2.81	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
33	IG40_SR2	SilentIntergenicRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.30	0.00	1.19	0.19	0.00	0.00	0.00	0.00	1.16	0.00	0.00	0.22	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
34	IG40_SR4	SilentIntergenicRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	2.02	1.84	0.88	1.44	4.76	0.00	1.38	0.62	0.00	0.00	0.44	0.00	0.00	0.00	0.00	0.00	0.00	0.94	0.00	0.00	0.00	0.00	0.00
35	IG40_SR7	SilentIntergenicRegion	0	0.95	3.56	0.74	1.58	1.08	0.30	1.78	2.44	1.36	2.23	1.31	0.27	0.85	1.60	4.46	1.10	3.30	1.28	0.71	2.43	2.52	0.40	1.20	5.22	1.89	2.43	0.00	3.24	0.59
36	IG40_AR4	ActiveIntergenicRegion	0	1.17	3.52	1.83	2.94	4.01	1.51	1.65	3.27	4.53	3.95	2.77	5.06	4.52	1.79	8.68	0.68	4.29	2.63	5.68	12.60	2.73	1.97	1.98	4.12	2.54	3.87	2.50	7.13	1.37
37	IG40_SR8	SilentIntergenicRegion	0	0.70	0.90	0.27	0.00	0.00	1.12	0.65	1.79	0.36	1.17	0.19	0.60	0.21	0.00	5.21	0.29	0.00	0.94	1.56	4.67	2.78	0.00	0.29	0.70	0.93	0.77	1.19	2.65	0.00
38	IG40_SR9	SilentIntergenicRegion	0	4.97	0.00	0.00	5.54	0.00	0.00	0.00	1.42	0.00	0.00	0.00	0.96	0.00	0.00	0.00	0.00	0.00	1.49	0.00	0.00	0.00	1.39	0.00	0.00	0.00	1.21	0.00	0.00	0.00
39	IG40_SR10	SilentIntergenicRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.81	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00