Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	IKBIP	Gene	0	85.26	97.07	22.18	144.32	154.50	103.82	169.76	29.52	82.89	59.50	64.14	51.06	62.36	60.12	134.56	64.36	39.05	74.10	87.36	135.41	105.70	51.14	73.39	106.11	59.00	32.66	123.41	53.48	32.47
2	393042	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
3	420861	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
4	299157	Transcript	0	81.28	86.72	30.89	111.86	201.96	69.77	83.12	29.29	33.10	48.31	31.06	29.54	50.52	51.24	76.22	35.97	27.78	68.46	90.31	114.26	78.27	51.63	67.94	87.66	43.87	22.35	72.16	35.03	18.80
5	342502	Transcript	0	104.99	126.23	69.11	466.76	342.20	196.94	459.95	29.81	128.75	79.73	147.67	69.67	64.96	70.17	222.24	88.66	50.83	87.85	113.29	137.94	168.94	58.92	67.82	152.53	86.76	58.58	144.62	83.66	35.32
6	IG18_AR2	ActiveIntergenicRegion	0	0.69	0.75	2.70	6.94	1.58	4.41	0.00	0.00	0.00	5.10	0.00	0.80	0.42	1.60	5.03	5.73	0.96	5.80	3.09	1.28	1.81	0.58	2.91	1.39	0.92	6.08	0.59	1.58	0.00
7	IG18_SR1	SilentIntergenicRegion	0	0.00	0.00	0.00	0.00	0.00	3.60	0.59	0.00	0.00	0.00	0.00	0.49	0.00	0.27	0.00	1.48	0.00	0.00	0.00	0.00	0.00	0.00	1.42	0.00	0.00	0.00	0.00	0.50	0.00
8	ER1a	ExonRegion	0	4.15	0.46	0.00	0.00	1.73	1.51	1.32	1.25	0.80	0.00	0.62	0.59	0.65	3.92	3.89	1.76	1.98	2.62	0.00	1.07	0.00	1.65	1.28	1.55	0.86	2.52	0.00	2.31	1.43
9	E1_Ab	KnownBoundary	0	8.14	7.76	0.00	0.00	0.00	0.00	2.35	2.04	0.00	0.00	1.61	1.33	1.62	4.45	0.00	0.00	4.01	4.62	0.00	0.00	0.00	2.48	0.00	5.56	1.78	2.19	0.00	0.00	0.00
10	ER1b	ExonRegion	0	156.96	27.09	53.08	279.20	232.66	58.62	168.61	72.72	51.30	49.88	35.74	44.07	62.37	59.90	136.53	90.51	32.10	99.28	31.13	115.26	59.46	131.09	108.16	62.75	54.39	89.75	79.12	107.53	42.02
11	E1_Da	NovelBoundary	0	2.48	0.00	0.00	0.00	0.00	3.22	7.90	0.00	4.35	2.04	0.00	0.00	1.62	5.36	9.97	6.66	1.33	4.62	8.09	10.67	2.05	6.56	2.51	3.05	1.86	2.02	0.00	0.00	0.00
12	E1a_E2a	KnownJunction	0	127.35	39.36	33.16	71.83	57.33	103.13	363.03	53.75	73.63	126.55	61.47	62.47	70.98	80.23	195.13	173.73	53.84	160.67	24.28	159.36	109.22	75.94	181.78	90.74	81.38	165.43	68.18	142.57	72.00
13	E1a_E3a	NovelJunction	0	2.71	0.00	0.00	9.71	0.00	0.00	2.80	0.00	0.00	2.04	0.00	1.45	5.00	3.52	0.00	3.82	0.00	4.62	0.00	4.05	6.66	6.95	11.77	11.48	3.79	0.00	2.14	12.72	0.00
14	E1a_E4a	KnownJunction	0	86.24	17.06	2.79	8.41	6.63	64.65	169.13	19.11	45.83	57.20	26.29	36.11	40.16	28.16	84.11	114.14	24.29	55.48	48.55	82.78	68.83	42.78	71.02	41.51	40.39	48.15	51.69	35.72	15.32
15	I1	Intron	0	3.50	1.45	1.03	2.20	1.98	4.20	2.96	0.91	4.27	4.13	1.98	2.51	1.79	2.89	6.99	2.49	2.34	2.71	3.74	2.38	3.95	0.91	0.69	3.16	1.16	1.86	1.48	2.14	0.90
16	I1_AR1	ActiveIntronRegion	0	9.09	0.00	2.11	5.75	4.48	4.25	8.55	3.80	7.06	5.79	0.82	5.51	3.71	7.21	19.71	3.61	3.93	3.61	2.20	6.77	2.45	3.93	2.69	4.44	1.15	5.22	2.52	4.48	0.92
17	I1_SR1	SilentIntronRegion	0	2.91	1.61	0.91	1.82	1.72	4.20	2.37	0.60	3.97	3.95	2.11	2.20	1.58	2.43	5.65	2.37	2.17	2.61	3.91	1.91	4.11	0.59	0.48	3.02	1.16	1.50	1.38	1.90	0.90
18	E2_Aa	NovelBoundary	0	2.77	0.00	1.30	16.39	0.00	5.60	4.86	0.00	8.86	6.11	0.00	1.45	3.18	2.39	18.34	16.06	1.40	5.39	24.28	11.25	9.55	2.14	0.00	7.66	1.82	0.00	12.67	0.00	1.75
19	ER2a	ExonRegion	0	172.42	113.27	56.77	278.62	327.68	149.33	319.53	55.81	77.08	106.45	151.45	97.87	90.50	107.82	208.60	106.98	64.02	108.98	108.47	206.87	126.13	99.21	174.14	163.16	97.73	100.54	306.47	193.41	72.53
20	E2_Da	NovelBoundary	0	0.00	0.00	2.99	0.00	0.00	4.76	7.84	4.13	16.41	7.07	4.59	1.54	0.00	4.32	0.00	3.21	7.16	4.62	0.00	8.27	17.45	2.14	0.00	8.31	0.00	0.00	5.07	1.66	7.86
21	E2a_E3a	KnownJunction	0	98.15	83.96	44.77	144.95	256.72	65.88	72.78	35.23	16.54	49.85	30.34	26.42	49.65	52.05	66.77	34.27	26.36	70.12	89.02	122.48	70.92	64.61	73.43	91.28	40.58	20.00	68.98	33.79	13.27
22	E2a_E4a	KnownJunction	0	104.99	126.23	69.11	466.76	342.20	196.94	459.95	29.81	128.75	79.73	147.67	69.67	64.96	70.17	222.24	88.66	50.83	87.85	113.29	137.94	168.94	58.92	67.82	152.53	86.76	58.58	144.62	83.66	35.32
23	I2	Intron	0	2.51	1.88	0.87	3.09	1.68	3.03	2.43	0.41	4.07	4.28	2.11	2.01	1.34	2.17	6.08	1.71	3.66	2.81	4.19	2.23	2.76	0.40	0.94	4.23	1.11	1.36	1.77	2.14	1.19
24	I2_SR1	SilentIntronRegion	0	2.53	1.56	1.09	2.75	1.29	3.04	3.04	0.49	4.52	4.01	2.71	1.77	1.49	2.37	7.15	2.09	4.06	3.51	4.71	2.15	3.28	0.48	1.23	4.89	1.27	1.39	1.95	2.42	1.46
25	I2_AR1	ActiveIntronRegion	0	2.28	1.29	0.45	4.77	2.60	3.11	2.39	0.00	3.06	7.67	2.17	3.12	0.60	2.52	6.61	0.99	4.75	1.71	5.96	5.03	2.28	0.24	0.48	4.57	0.95	1.05	0.98	2.11	0.00
26	I2_SR2	SilentIntronRegion	0	2.59	2.81	0.61	3.04	2.07	2.99	1.22	0.45	3.63	3.32	0.86	2.01	1.37	1.61	3.67	1.27	2.35	1.88	2.32	1.12	1.90	0.33	0.55	2.73	0.86	1.43	1.77	1.58	1.17
27	E3_Aa	NovelBoundary	0	10.38	0.00	1.54	8.20	14.74	5.29	0.00	0.00	7.16	7.19	1.61	1.54	0.00	5.38	24.12	3.67	3.15	4.62	0.00	3.39	0.00	4.52	0.00	0.00	1.93	0.00	0.00	4.58	0.00
28	ER3a	ExonRegion	0	64.41	89.47	17.02	78.78	147.20	73.67	93.46	23.35	49.65	46.77	31.79	32.67	51.40	50.43	85.67	37.68	29.19	66.79	91.60	106.04	85.62	38.65	62.45	84.04	47.16	24.69	75.33	36.28	24.33
29	E3_Da	NovelBoundary	0	2.36	3.88	2.94	0.00	12.38	6.87	6.75	1.99	9.01	13.10	0.00	6.54	11.02	10.59	15.15	6.12	3.74	4.62	16.18	21.83	7.38	2.09	12.71	14.59	11.29	0.00	4.12	5.80	14.96
30	I3	Intron	0	1.73	2.47	0.60	1.59	4.82	3.42	2.91	0.66	5.41	3.11	1.19	2.18	1.68	2.26	7.06	2.16	3.15	1.35	2.62	5.33	4.46	0.45	0.98	5.05	1.67	1.92	2.16	2.17	1.23
31	I3_AR1	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.00	0.34	0.00	0.00	1.40	0.00	0.00	0.00	0.00	0.00	0.00	2.53	0.00	0.00	3.39	0.00	1.78	0.00	0.00	0.00	1.25	0.00	0.00	0.00	0.00
32	I3_SR1	SilentIntronRegion	0	1.86	3.58	0.87	2.07	6.91	3.85	3.55	1.01	6.45	3.00	0.93	2.53	2.50	2.52	10.06	2.31	3.71	1.79	3.86	7.46	6.05	0.68	1.36	6.77	2.35	2.90	3.33	3.20	1.99
33	I3_AR3	ActiveIntronRegion	0	2.33	3.68	1.02	2.62	8.92	5.50	5.06	0.45	11.30	4.58	1.79	3.94	2.28	3.29	4.14	4.50	5.29	1.91	2.33	8.39	4.98	0.44	1.32	7.07	2.05	2.49	2.45	1.92	1.04
34	E4_Aa	NovelBoundary	0	0.00	0.00	1.07	18.12	0.00	0.00	0.00	0.00	5.57	1.60	0.00	0.00	0.00	1.13	0.00	0.00	2.25	4.62	0.00	0.00	6.06	0.00	0.00	3.05	0.00	0.00	0.00	0.00	0.00
35	ER4a	ExonRegion	0	120.61	151.79	25.57	283.78	151.68	208.57	381.67	33.81	195.08	99.81	158.38	104.38	97.70	88.77	275.80	132.11	70.15	92.53	104.06	231.98	187.47	61.56	90.39	187.53	96.22	32.54	261.81	73.20	51.06
36	IG17_AR2	ActiveIntergenicRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.97	0.00	0.76	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00