Order SeqName SeqType IsAE ABC_RG012 ABC_RG016 ABC_RG015 ABC_RG046 ABC_RG047 ABC_RG048 ABC_RG049 ABC_RG058 ABC_RG059 ABC_RG061 ABC_RG073 ABC_RG074 ABC_RG086 GCB_RG003 GCB_RG005 GCB_RG006 GCB_RG007 GCB_RG010 GCB_RG014 GCB_RG045 GCB_RG050 GCB_RG055 GCB_RG062 GCB_RG063 GCB_RG064 GCB_RG071 GCB_RG072 GCB_RG069 GCB_RG085 1 LYZ Gene 0 13842.50 34645.01 2725.33 1365.61 2310.43 51016.18 10132.41 1461.88 8334.11 6623.89 5264.40 10102.54 3508.28 15558.25 2360.41 6423.88 1514.38 20005.03 6953.64 9698.89 7897.55 28375.60 5016.72 4837.16 10115.69 6739.25 25030.56 792.73 4046.57 2 261267 Transcript 0 24622.12 35814.78 4719.30 1695.07 3544.40 51263.96 10698.23 2565.64 8082.43 7755.11 5836.85 12907.80 3759.87 22169.28 2031.39 7023.81 1756.62 22690.68 6138.91 12110.07 8575.16 53556.10 6063.99 6881.06 14992.54 8997.49 26388.72 1067.09 4514.25 3 IG39_AR2 ActiveIntergenicRegion 0 1.35 0.00 0.38 0.00 0.00 3.82 0.41 0.00 0.11 0.73 0.12 0.00 0.00 6.01 0.55 4.19 7.81 0.39 1.57 0.46 1.30 0.00 0.00 0.53 0.87 0.48 0.00 1.56 0.27 4 ER1a ExonRegion 1 17740.61 26667.46 4694.19 1929.12 3562.82 30726.00 7577.25 1708.92 5483.25 6736.90 4745.37 11245.33 2991.93 13564.99 1140.03 6806.27 1440.07 16934.79 4770.67 6256.67 6572.29 39110.41 6553.50 3944.36 11583.71 9331.23 22367.13 1084.14 4551.61 5 E1_Da NovelBoundary 0 37.16 25.40 1.32 0.00 0.00 49.42 5.09 0.00 1.71 2.04 5.06 5.24 0.00 25.35 0.00 3.37 1.01 13.87 8.09 14.56 0.00 4.96 0.00 2.57 5.15 2.19 0.00 0.00 3.17 6 E1a_E2a KnownJunction 1 35296.07 20555.72 717.15 261.42 286.78 16666.19 3249.06 2674.12 5310.46 2188.38 1339.38 5207.77 2115.13 19509.24 933.21 1962.19 560.35 10274.55 2094.38 10548.44 2768.46 89973.87 1507.68 8419.45 9346.88 3493.00 5018.75 418.54 2358.62 7 E1a_E3a NovelJunction 0 0.00 20.55 0.00 0.00 0.00 0.00 0.00 0.00 1.31 0.00 0.00 1.39 1.62 0.00 0.00 0.00 0.00 0.00 0.00 3.89 0.00 11.67 0.00 5.86 0.00 0.00 0.00 0.00 0.00 8 I1 Intron 0 34.41 55.07 2.47 0.29 0.80 60.74 5.54 0.76 3.54 8.30 2.39 4.74 0.69 19.53 4.27 11.48 3.68 27.58 5.51 13.02 9.84 3.78 0.15 6.45 5.28 5.49 2.18 0.60 1.01 9 I1_AR1 ActiveIntronRegion 0 47.15 63.14 3.65 0.92 0.63 66.42 6.32 0.71 5.11 9.24 2.57 6.38 1.16 26.75 1.79 16.65 4.95 36.21 5.34 12.91 8.07 6.07 0.00 5.60 8.48 9.30 1.18 0.63 1.55 10 I1_SR1 SilentIntronRegion 0 34.39 19.71 0.00 0.00 0.00 18.43 1.37 0.00 3.32 5.55 0.24 0.53 0.00 9.13 6.24 4.31 2.05 10.42 3.70 2.11 1.78 1.64 0.00 1.81 4.65 5.36 0.00 0.15 0.00 11 I1_AR2 ActiveIntronRegion 0 30.35 53.41 2.28 0.00 0.86 60.50 5.74 0.69 2.34 8.04 1.43 4.57 0.32 15.88 6.27 10.64 3.29 24.36 5.55 14.55 11.97 2.32 0.15 8.01 3.29 3.69 2.29 0.81 0.34 12 I1_SR2 SilentIntronRegion 0 23.65 60.75 1.56 0.00 1.49 64.89 4.81 1.20 4.72 8.47 6.17 2.64 0.76 20.33 2.09 5.10 2.84 22.78 5.04 12.48 9.66 4.07 0.41 5.21 5.70 3.76 5.65 0.00 2.49 13 I1_AR3 ActiveIntronRegion 0 12.44 21.47 0.00 0.00 0.00 42.41 2.56 1.35 2.44 5.81 3.54 3.71 2.03 12.94 4.78 5.31 2.00 29.02 10.60 5.76 5.18 4.40 0.75 1.36 3.31 1.88 0.00 0.00 1.70 14 E2_Aa NovelBoundary 0 79.22 113.43 2.96 0.00 0.00 91.85 7.72 0.00 4.11 8.07 8.04 5.99 1.31 25.30 0.00 2.91 1.24 18.49 0.00 29.94 18.65 4.47 0.00 7.96 9.66 4.03 2.48 0.00 1.25 15 ER2a ExonRegion 0 27847.98 47582.60 2105.60 550.49 1377.08 58211.92 14501.60 3361.09 9421.58 11221.21 7428.78 19156.78 5157.84 25967.03 2188.72 11057.90 2425.51 31691.96 8558.48 13528.84 11201.85 59114.58 10197.26 7135.15 20973.18 13627.87 31471.13 1549.48 6672.52 16 E2_Da NovelBoundary 0 82.70 59.92 2.82 0.00 0.00 74.62 11.50 7.12 4.08 12.18 9.27 7.23 1.18 32.06 0.00 0.00 0.86 42.25 0.00 21.17 21.98 2.29 0.00 8.13 5.23 3.86 0.00 0.00 0.00 17 E2a_E3a KnownJunction 1 23991.62 31869.06 7165.93 1383.88 5785.65 50501.86 10863.54 2917.97 7412.44 7781.48 6909.34 15517.64 3807.76 25421.11 1999.18 6315.12 2393.61 22253.11 5985.28 13932.74 8038.96 52081.30 6738.98 6616.37 14864.22 10262.88 36060.06 1444.50 4420.80 18 E2a_E4a NovelJunction 1 112.66 247.51 38.69 38.82 26.67 232.66 69.06 13.14 35.23 25.13 27.87 42.26 31.94 98.64 9.77 42.99 19.97 111.73 40.46 77.32 41.19 177.74 18.12 49.47 59.03 21.11 70.82 6.60 28.92 19 I2 Intron 0 26.49 57.29 1.02 0.36 0.25 64.05 5.00 0.47 4.09 7.54 2.65 5.34 1.24 15.22 8.05 8.60 1.81 26.03 13.75 12.10 13.73 2.28 0.73 7.51 3.91 2.94 3.34 0.17 0.98 20 I2_AR1 ActiveIntronRegion 0 39.66 49.91 1.76 1.08 0.00 64.73 8.19 1.11 2.78 11.53 3.76 7.88 0.68 21.98 5.25 3.73 1.35 26.71 11.51 12.45 14.81 3.80 1.09 7.77 4.73 4.96 1.93 0.00 1.31 21 I2_SR1 SilentIntronRegion 0 29.69 90.25 0.90 0.00 0.00 70.33 3.66 0.00 2.45 8.10 0.17 2.71 2.84 12.68 25.65 22.50 0.30 32.19 22.73 13.03 15.64 1.34 1.89 2.38 1.12 3.45 0.00 0.00 1.31 22 I2_AR2 ActiveIntronRegion 0 18.93 58.55 0.62 0.00 0.45 65.12 3.47 0.17 5.33 5.29 2.50 4.43 1.37 12.12 7.13 9.60 2.43 25.62 14.15 12.20 13.29 1.60 0.35 8.52 4.03 1.74 4.90 0.30 0.76 23 E3_Aa NovelBoundary 0 90.60 99.08 2.69 0.00 12.08 153.70 4.69 4.33 17.66 11.70 1.61 8.89 2.93 24.97 8.77 20.65 8.40 32.88 16.18 31.92 18.49 26.93 0.00 18.78 19.06 23.43 9.94 1.84 3.14 24 ER3a ExonRegion 0 26907.96 39425.39 9624.42 2790.75 5077.08 66028.56 15412.35 3001.10 9368.85 10152.62 7789.08 16075.76 4381.95 27982.64 2336.31 8050.66 2168.01 26790.42 6423.35 14231.25 10777.33 55247.74 7506.02 7722.86 19300.76 11100.26 31478.40 1315.03 5034.46 25 E3_Da NovelBoundary 0 41.05 71.65 2.57 0.00 0.00 64.65 0.00 0.00 9.14 7.15 6.86 9.25 0.00 12.81 0.00 10.02 4.39 32.36 8.09 22.41 9.39 2.19 0.00 25.36 3.64 6.18 4.77 0.00 4.36 26 E3a_E4a KnownJunction 0 30509.40 50872.80 6759.96 3663.53 6691.99 84307.42 13752.72 3280.42 10984.25 10560.85 7804.79 15069.21 4580.62 29326.23 3018.30 9444.38 1968.10 32622.18 8007.05 16881.30 13250.34 59541.62 6171.97 9895.99 21351.22 10256.10 34278.70 1070.40 5077.44 27 I3 Intron 0 19.30 45.55 1.23 1.32 1.35 51.17 5.37 0.51 5.51 4.78 3.39 7.76 1.01 8.02 4.72 6.71 3.98 15.99 9.39 12.88 8.65 1.99 0.33 7.91 4.07 6.64 6.56 0.15 2.03 28 I3_SR1 SilentIntronRegion 0 26.67 52.67 1.47 2.51 1.71 74.44 6.36 0.97 7.66 6.58 5.42 10.80 1.93 11.01 5.47 8.45 5.49 20.65 10.08 17.60 10.75 2.53 0.63 11.31 5.51 10.74 8.02 0.29 3.28 29 I3_SR2 SilentIntronRegion 0 11.27 37.99 0.98 0.00 0.95 25.70 4.32 0.00 3.16 2.81 1.16 4.44 0.00 4.76 3.93 4.83 2.32 10.94 8.71 7.73 6.39 1.40 0.00 4.19 2.50 2.14 4.99 0.00 0.65 30 E4_Aa NovelBoundary 0 46.13 120.99 1.07 0.00 12.38 92.12 10.07 0.00 10.41 3.71 1.23 7.02 0.00 13.56 8.37 19.12 8.40 19.26 16.18 33.16 15.64 7.39 0.00 7.78 3.37 11.37 11.33 0.00 3.47 31 ER4a ExonRegion 0 10061.18 33730.46 1967.86 1286.32 2029.42 52405.78 9531.12 1015.86 8596.22 5644.33 4841.23 8082.09 3283.88 13413.69 2604.01 5530.12 1340.66 18267.78 7133.15 9391.28 7416.89 19823.16 3772.54 4433.26 7527.81 4911.12 24046.88 587.57 3484.33 32 IG40_SR1 SilentIntergenicRegion 0 5.39 13.03 0.00 0.00 0.00 4.24 0.00 0.00 0.00 0.00 0.00 0.87 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.33 0.00 1.53 0.00 1.83 1.21 0.00 3.05 0.00 0.00 33 IG40_AR1 ActiveIntergenicRegion 0 0.71 6.57 0.00 0.00 0.00 7.79 0.00 0.00 0.00 0.00 0.00 1.24 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.81 0.00 0.00 0.00 0.00 0.00 0.00 0.61 0.00 0.00 34 IG40_AR3 ActiveIntergenicRegion 0 0.00 0.00 0.00 0.00 8.51 1.27 3.15 0.00 0.00 1.41 0.87 0.00 0.00 0.00 0.00 0.00 0.00 2.40 6.40 4.32 0.00 2.81 0.00 0.00 0.00 0.00 0.00 0.00 0.00