Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	CMAS	Gene	0	76.67	234.99	73.67	304.34	246.36	200.99	140.29	112.02	227.38	133.65	246.75	211.21	213.30	165.45	251.43	164.66	116.19	151.92	369.75	165.31	221.90	80.22	172.58	213.11	142.86	133.56	199.16	230.59	279.49
2	229329	Transcript	0	88.37	253.28	86.60	388.81	291.14	232.69	166.55	135.64	236.52	159.23	309.20	245.04	253.24	192.98	260.77	187.14	131.81	170.73	421.07	190.25	267.63	86.10	200.78	262.76	187.11	147.31	253.98	285.57	331.66
3	ER1a	ExonRegion	1	41.72	57.30	58.90	132.34	115.25	43.03	44.83	42.48	25.32	44.22	49.20	63.31	62.27	60.50	80.70	55.05	36.85	104.42	68.97	75.15	61.12	56.23	101.59	47.30	50.33	113.15	45.78	151.90	127.38
4	E1_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.88	0.00	0.00	0.00	1.22	0.00	0.00	0.00	0.00	0.00	3.89	0.00	0.00	0.00	0.00	0.00	2.19	0.00	0.00	0.00
5	E1a_E2a	KnownJunction	1	57.27	101.12	145.68	152.71	346.47	80.30	88.34	92.51	42.94	71.18	126.35	112.05	101.90	84.82	91.09	70.00	55.91	108.52	145.66	124.30	95.18	34.28	147.85	147.68	106.95	142.43	201.32	320.68	214.79
6	I1	Intron	0	1.98	2.36	0.32	1.07	1.40	2.86	1.01	0.57	2.20	1.84	0.99	0.73	0.41	2.50	2.42	3.14	4.08	1.96	3.33	2.23	1.92	0.36	0.29	0.87	1.06	0.67	0.53	0.95	0.70
7	I1_SR1	SilentIntronRegion	0	1.99	2.35	0.32	1.07	1.41	2.87	1.01	0.57	2.20	1.85	0.99	0.73	0.42	2.51	2.44	3.16	4.09	1.97	3.35	2.20	1.93	0.37	0.29	0.87	1.07	0.67	0.53	0.96	0.71
8	E2_Aa	NovelBoundary	0	0.00	0.00	1.27	0.00	0.00	1.84	2.46	0.00	11.15	3.91	0.00	3.52	0.00	2.22	15.95	26.62	3.62	0.00	8.09	3.47	6.54	0.00	0.00	4.79	0.00	0.00	0.00	2.29	0.00
9	I1_AR1	ActiveIntronRegion	0	0.00	4.64	0.00	0.00	0.00	1.42	0.00	0.00	2.13	0.00	0.00	0.90	0.00	0.78	0.00	0.44	1.55	0.00	0.00	7.17	1.43	0.00	0.00	1.19	0.00	0.00	0.00	0.00	0.00
10	ER2a	ExonRegion	0	69.21	185.65	162.97	419.07	410.02	179.55	114.11	89.98	131.11	132.75	228.53	198.58	168.61	164.59	145.22	164.73	87.23	156.71	273.13	171.41	190.09	74.68	158.60	183.58	158.78	110.18	169.49	180.77	184.25
11	E2_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	3.91	0.00	0.00	5.69	0.00	0.00	0.00	0.00	0.00	0.00	3.82	2.23	0.00	8.09	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
12	E2a_E3a	KnownJunction	0	82.87	281.54	38.87	424.05	284.43	239.03	131.31	119.49	158.81	171.29	323.34	235.60	203.45	187.51	168.62	192.39	116.87	265.59	452.95	177.80	237.21	43.42	210.59	207.32	190.71	139.47	232.19	222.01	277.84
13	E3_Aa	NovelBoundary	0	0.00	0.00	1.54	10.14	0.00	3.91	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.15	0.00	0.00	10.92	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
14	ER3a	ExonRegion	0	97.75	288.67	68.76	351.43	266.70	299.52	195.13	137.92	217.11	192.91	387.95	289.20	291.35	214.47	208.55	242.06	130.37	199.02	454.00	216.87	320.67	93.96	253.02	280.06	237.62	161.27	280.21	286.34	345.99
15	E3_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.10	0.00	3.82	1.10	0.00	0.00	9.68	0.00	0.00	0.00	2.87	0.00	1.76	0.00	0.00	2.05
16	E3a_E4a	KnownJunction	0	110.60	343.20	123.75	370.77	218.40	239.07	261.64	167.91	260.73	168.85	337.16	299.12	331.85	217.18	263.50	210.98	156.39	185.58	598.39	179.04	330.31	121.20	251.81	284.78	225.83	180.33	340.13	307.42	353.48
17	ER4a	ExonRegion	0	134.85	321.77	92.70	393.25	328.82	316.34	204.81	155.54	262.98	222.79	409.57	305.56	304.66	257.76	272.51	253.00	154.56	208.35	548.20	247.49	330.42	128.88	260.86	351.94	260.02	177.62	384.44	346.23	419.24
18	E4_Da	NovelBoundary	0	0.00	4.36	0.00	0.00	0.00	3.76	0.00	0.00	1.34	0.00	0.00	1.54	2.61	4.19	0.00	3.06	1.28	0.00	0.00	0.00	1.80	0.00	0.00	0.00	1.82	0.00	0.00	0.00	0.00
19	E4a_E5a	KnownJunction	0	153.07	297.06	65.45	592.94	334.39	302.07	211.29	204.04	329.16	235.96	471.67	314.42	472.79	244.99	403.42	241.81	190.95	213.84	460.15	253.72	386.70	109.53	242.70	394.54	323.84	173.12	246.10	414.72	520.03
20	E4a_E8a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	1.61	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.21	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	5.07	0.00	0.00
21	I4	Intron	0	1.51	1.96	0.00	0.48	1.80	2.44	0.81	0.25	3.59	1.26	0.44	0.79	0.84	1.50	4.16	3.20	3.25	1.50	2.36	1.65	1.72	0.00	0.30	1.87	1.44	0.47	0.61	0.98	0.74
22	I4_AR2	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.00	1.37	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.11	0.00	0.00	2.00	0.00	0.00	0.00	0.00	0.00	0.00	2.15	0.00	0.00	0.00	1.22	0.00
23	I4_AR3	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.00	1.37	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.91	0.00	2.53	2.00	5.46	0.00	0.00	0.00	0.00	0.00	2.15	1.02	0.00	0.00	1.63	0.00
24	I4_AR4	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.00	2.75	0.00	0.00	0.00	0.00	0.00	0.00	1.30	0.91	0.00	2.53	2.00	9.36	0.00	0.00	1.43	0.00	0.00	2.15	2.86	0.00	1.83	1.63	0.00
25	I4_AR5	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.00	2.55	0.00	0.00	0.00	0.00	0.00	0.00	1.30	1.55	0.00	3.62	2.00	13.65	0.00	0.00	1.43	0.00	0.00	0.00	2.86	0.00	1.83	1.63	0.00
26	I4_AR6	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.00	1.37	0.00	0.00	2.81	0.00	0.00	0.00	1.30	2.57	0.00	5.06	2.00	8.19	0.00	0.00	2.62	0.00	0.00	0.36	3.57	0.00	3.66	0.54	0.00
27	I4_SR1	SilentIntronRegion	0	0.00	1.45	0.00	0.00	0.00	0.36	0.00	0.00	2.72	0.69	0.00	0.00	4.57	3.94	0.00	1.32	2.66	2.24	0.00	0.00	3.51	0.00	0.00	1.63	3.03	0.00	1.36	1.17	0.00
28	I4_AR7	ActiveIntronRegion	0	0.00	3.28	0.00	0.00	0.00	2.75	0.00	0.00	1.12	1.44	0.00	0.00	3.90	4.54	0.93	0.00	3.01	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.86	0.00	0.00	1.63	0.00
29	I4_AR8	ActiveIntronRegion	0	2.48	2.16	0.00	0.92	2.20	3.09	1.42	0.24	5.26	1.67	0.61	1.50	0.58	1.77	5.25	3.44	4.12	1.51	3.08	3.16	2.75	0.00	0.58	2.90	1.56	0.91	0.47	1.36	1.16
30	I4_SR3	SilentIntronRegion	0	1.51	5.35	0.00	0.00	5.15	3.38	0.71	1.30	0.00	2.03	0.00	0.00	0.00	0.64	5.18	3.49	2.63	0.68	6.74	0.00	0.00	0.00	0.00	0.76	1.51	0.00	0.00	0.57	0.70
31	E5_Aa	NovelBoundary	0	2.60	9.50	1.27	0.00	0.00	0.00	0.00	0.00	4.63	3.87	1.61	1.84	0.00	1.13	0.00	7.11	8.87	0.00	8.09	4.05	3.45	0.00	0.00	2.39	1.82	0.00	0.00	0.00	3.66
32	ER5a	ExonRegion	0	118.03	224.34	65.97	465.39	295.48	270.93	182.54	109.69	280.45	166.44	368.58	263.60	278.00	225.68	256.51	195.11	149.88	189.43	480.07	209.65	304.21	83.63	191.85	304.47	201.75	127.48	284.31	314.12	340.77
33	E5_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	2.40	0.00	1.34	0.00	0.00	1.87	0.00	0.00	0.00	10.71	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.99	0.00	0.00	0.00	0.00	0.00
34	E5a_E6a	KnownJunction	0	48.25	221.63	72.33	483.58	259.08	225.10	138.52	45.29	211.98	140.13	286.51	222.86	204.89	182.99	223.64	186.27	109.03	111.73	363.94	183.43	279.29	32.67	161.49	218.45	118.69	94.84	280.59	219.31	229.44
35	E5a_E7a	NovelJunction	0	11.38	18.32	0.00	0.00	14.44	3.41	2.35	4.38	5.21	7.07	4.21	2.59	10.89	13.18	41.26	3.29	13.03	4.62	16.18	15.71	7.58	4.72	0.00	5.26	5.46	2.15	2.53	11.01	1.45
36	E5a_E8a	NovelJunction	0	2.48	9.02	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.76	0.00	0.00	6.69	1.95	0.00	0.00	0.00	0.00	0.00	0.00	6.14	2.33	0.00	0.00	0.00	1.76	0.00	0.00	0.00
37	I5_SR1	SilentIntronRegion	0	0.31	3.50	0.00	0.00	1.43	2.41	0.59	0.00	1.64	0.63	0.00	0.27	0.00	0.66	2.15	1.45	3.49	1.13	1.40	0.40	0.00	0.00	0.00	0.00	0.00	0.23	0.00	1.19	1.17
38	E6_Aa	NovelBoundary	0	3.01	0.00	0.00	0.00	0.00	0.00	2.75	0.00	1.55	0.00	0.00	0.00	0.00	0.00	0.00	6.27	5.02	4.62	0.00	4.13	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
39	ER6a	ExonRegion	0	81.10	307.56	94.08	502.96	365.25	329.91	182.88	112.84	339.66	200.05	412.19	324.96	294.06	217.96	284.10	234.77	167.07	179.92	529.68	226.13	355.26	63.12	204.33	312.15	179.41	125.20	343.10	320.35	408.25
40	E6a_E7a	KnownJunction	0	67.95	287.17	100.66	457.91	368.43	329.96	201.74	122.13	356.90	172.05	357.95	297.86	300.67	232.80	360.97	218.48	175.91	134.98	461.27	255.79	372.63	86.39	215.07	333.65	217.61	139.17	345.30	337.88	397.25
41	E7_Aa	NovelBoundary	0	2.24	3.88	0.00	0.00	0.00	0.00	5.21	0.00	1.25	0.00	0.00	0.00	0.00	0.95	8.77	0.00	3.08	0.00	0.00	0.00	2.01	2.29	0.00	0.00	0.00	0.00	0.00	0.00	1.82
42	ER7a	ExonRegion	0	102.01	294.70	89.03	382.77	316.39	241.58	180.78	217.89	314.63	178.43	348.39	286.97	315.61	222.10	311.38	199.14	173.64	166.44	440.62	203.55	281.27	119.46	257.88	318.10	209.04	206.84	283.96	341.68	461.07
43	E7_Da	NovelBoundary	0	0.00	3.88	0.00	0.00	0.00	7.40	0.00	0.00	0.00	0.00	2.66	2.92	0.00	5.74	0.00	3.82	3.38	0.00	0.00	4.13	5.50	2.24	0.00	8.49	5.38	0.00	0.00	0.00	0.00
44	E7a_E8a	KnownJunction	0	96.62	303.94	72.98	469.56	264.68	209.91	217.65	303.72	313.33	179.95	338.46	266.95	260.04	230.10	477.57	191.40	151.08	202.92	614.80	182.27	267.90	169.58	215.62	363.44	225.99	201.87	223.09	345.84	451.86
45	I7	Intron	0	1.07	5.56	0.16	1.34	2.28	3.42	0.94	0.17	1.46	1.35	1.26	1.19	0.54	2.81	8.75	5.71	3.62	4.08	5.66	2.99	2.84	0.11	0.39	2.88	1.20	0.39	0.34	1.42	1.56
46	I7_AR1	ActiveIntronRegion	0	0.00	5.69	0.00	0.00	0.00	1.58	1.43	0.00	1.70	0.00	0.00	0.00	0.00	0.00	4.92	1.60	0.00	9.39	0.00	3.63	3.51	0.00	0.00	0.00	2.79	0.00	0.00	2.90	0.00
47	I7_AR2	ActiveIntronRegion	0	0.40	3.63	0.00	0.00	0.65	2.83	1.59	0.00	0.74	2.35	2.09	1.03	0.15	4.27	3.71	5.69	5.07	2.55	2.89	2.84	1.75	0.29	0.33	1.56	1.23	0.57	0.00	1.30	1.11
48	I7_SR1	SilentIntronRegion	0	2.14	2.42	0.00	0.00	1.70	2.60	1.91	0.00	0.15	0.00	3.57	0.62	2.50	7.35	5.60	9.46	13.02	0.22	2.26	0.30	2.40	0.28	0.10	2.43	2.93	0.00	0.00	0.00	1.34
49	I7_AR3	ActiveIntronRegion	0	1.86	2.65	0.20	0.00	1.75	5.29	0.55	0.44	2.40	1.73	1.01	1.55	1.00	2.52	5.53	3.77	3.35	3.52	8.21	4.20	3.20	0.22	0.42	1.59	1.03	0.38	0.00	1.76	2.10
50	I7_AR4	ActiveIntronRegion	0	0.90	7.82	0.20	2.59	3.23	2.81	0.85	0.11	1.28	0.96	1.07	1.15	0.39	2.42	12.40	6.75	3.06	4.81	5.77	2.52	3.01	0.00	0.44	4.14	1.12	0.38	0.66	1.28	1.53
51	E8_Aa	NovelBoundary	0	5.25	13.48	2.24	0.00	12.97	3.61	0.00	4.98	1.80	3.20	1.20	0.00	0.00	6.87	17.54	9.94	4.73	4.62	16.18	0.00	0.00	4.47	0.00	15.97	3.49	0.00	0.00	0.00	1.49
52	ER8a	ExonRegion	0	64.32	283.58	46.86	233.35	193.30	184.05	142.73	113.16	302.76	111.44	192.10	194.64	208.52	151.22	363.81	151.85	121.45	133.47	424.17	147.21	202.19	74.44	138.38	193.96	100.06	116.70	149.63	174.24	243.28
53	IG30_AR1	ActiveIntergenicRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.53	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
54	IG30_AR2	ActiveIntergenicRegion	0	0.30	0.45	0.12	0.00	0.00	0.39	0.28	0.00	0.01	0.69	0.42	0.17	0.00	0.19	0.00	0.10	1.34	0.54	0.45	143.00	0.40	0.38	0.26	0.30	0.40	0.22	0.00	0.35	0.27