Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	AC215219.2	Gene	0	33.44	13.59	11.36	13.16	18.44	9.95	23.52	21.49	18.94	11.17	3.37	21.93	6.76	13.24	23.74	16.76	31.67	12.30	1.42	8.43	7.48	17.40	7.82	29.10	15.41	8.57	7.49	15.73	7.08
2	400706	Transcript	0	19.62	9.50	7.30	7.35	9.70	5.95	18.21	16.30	16.78	6.56	2.14	19.86	3.30	7.91	17.86	16.06	21.66	9.31	2.07	7.01	5.69	14.35	5.17	23.29	15.30	7.10	7.53	14.55	4.35
3	400806	Transcript	0	32.70	9.84	1.70	14.80	13.65	5.66	8.85	7.19	3.54	8.39	0.07	1.91	0.08	0.67	5.74	6.87	17.54	18.67	0.27	3.86	0.75	9.30	0.47	13.98	7.11	7.97	2.39	3.75	3.23
4	ER1a	ExonRegion	0	0.00	0.00	0.07	0.00	0.00	0.00	0.74	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
5	E1a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
6	E2_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	1.96	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.72	0.00	0.00	4.33	0.00	0.00	0.00	0.00	4.36	1.98
7	ER2a	ExonRegion	0	0.00	0.00	5.36	29.25	51.41	0.00	1.53	1.18	0.00	0.58	0.00	3.83	0.00	0.54	0.00	0.46	5.09	0.00	0.00	0.00	0.00	0.00	0.00	1.25	0.20	0.00	0.66	1.53	0.38
8	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
9	I2_AR2	ActiveIntronRegion	0	1.00	2.09	0.53	0.00	0.93	9.82	1.67	1.49	1.82	5.01	0.37	0.48	0.00	2.68	1.43	2.57	13.15	1.20	1.99	0.86	2.66	0.00	1.32	2.18	2.14	0.00	2.23	0.76	1.31
10	I2_SR3	SilentIntronRegion	0	0.88	1.32	1.63	0.74	0.70	7.91	1.45	3.50	1.57	2.23	0.67	1.52	0.80	4.98	3.78	4.34	16.20	2.08	0.16	1.70	3.52	0.00	0.84	1.55	1.06	0.97	3.11	2.35	0.34
11	ER3a	ExonRegion	0	2.20	0.81	8.73	28.49	33.45	2.63	9.97	5.30	1.34	3.68	2.23	7.73	2.40	2.02	5.71	2.96	19.41	2.00	0.00	0.00	2.87	0.18	3.52	8.05	4.73	2.63	2.19	9.01	1.43
12	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
13	I3	Intron	0	7.50	3.78	3.18	5.68	4.41	11.32	6.61	6.76	6.13	9.68	1.56	3.29	0.84	9.65	4.53	11.97	28.13	10.03	2.18	1.91	6.26	1.54	1.03	4.78	4.98	6.56	5.66	7.46	2.27
14	I3_SR1	SilentIntronRegion	0	9.48	4.13	3.58	1.73	3.86	10.88	2.96	4.62	3.80	5.87	2.01	3.54	0.80	11.35	4.04	10.14	33.88	9.47	1.71	2.47	5.56	1.50	1.22	3.63	3.32	3.48	0.79	3.79	1.91
15	I3_AR2	ActiveIntronRegion	0	16.00	10.73	5.98	28.80	9.55	32.67	32.60	29.34	23.54	39.84	2.63	6.02	2.91	20.85	15.10	42.57	59.46	30.33	10.15	2.15	16.45	4.61	1.56	15.30	16.70	30.21	29.96	36.37	6.12
16	I3_AR3	ActiveIntronRegion	0	16.32	2.65	7.13	30.43	23.46	23.64	23.60	33.38	21.64	39.40	3.11	8.66	3.18	19.90	15.90	47.10	56.35	49.21	7.30	0.73	15.09	5.35	2.27	21.72	13.33	48.67	32.32	39.91	7.62
17	I3_SR2	SilentIntronRegion	0	16.77	0.58	5.02	20.65	33.11	25.07	26.92	29.57	16.06	46.80	7.14	10.19	0.00	23.96	15.48	37.51	49.79	36.44	11.18	2.81	19.55	6.79	1.81	14.68	10.51	29.12	36.85	53.41	8.13
18	I3_AR4	ActiveIntronRegion	0	15.36	3.28	5.11	16.25	25.74	31.16	28.33	30.38	14.67	42.03	7.14	9.28	0.00	29.73	7.47	29.10	49.31	26.08	13.33	4.68	19.73	5.61	2.41	11.95	13.50	18.42	40.50	38.76	12.68
19	I3_SR3	SilentIntronRegion	0	9.96	15.47	3.37	36.80	3.54	26.70	33.55	34.74	23.99	44.20	1.96	9.86	0.21	24.96	13.01	32.90	58.84	20.34	4.67	2.99	19.37	3.78	3.91	14.36	21.81	29.96	35.15	26.40	22.30
20	I3_AR5	ActiveIntronRegion	0	15.44	7.76	4.83	37.66	11.01	30.80	37.65	21.57	28.47	44.05	2.15	7.49	1.94	22.74	15.96	41.25	52.80	29.12	5.31	3.57	25.58	4.46	2.42	20.01	28.20	33.45	37.22	27.10	9.12
21	I3_AR6	ActiveIntronRegion	0	0.00	0.00	6.73	24.03	17.08	18.85	28.80	25.25	7.86	45.79	0.00	3.71	0.00	14.51	10.40	26.03	28.91	33.92	9.05	5.62	15.69	5.41	1.81	19.67	15.93	26.04	82.42	29.34	7.86
22	I3_AR7	ActiveIntronRegion	0	0.00	0.00	5.95	19.74	6.48	14.09	26.71	22.09	3.65	37.32	0.00	0.99	0.00	11.75	5.60	23.54	14.78	29.61	1.36	3.09	11.05	4.15	1.81	13.77	11.58	16.66	59.25	18.83	4.56
23	I3_AR8	ActiveIntronRegion	0	0.00	0.00	0.41	1.54	0.00	4.34	22.07	12.31	0.18	19.60	0.00	0.00	0.00	4.73	0.00	12.92	3.64	8.76	0.00	1.92	3.83	1.52	0.19	2.72	6.17	8.69	20.34	12.27	0.99
24	I3_AR9	ActiveIntronRegion	0	9.17	6.70	2.83	10.82	15.68	34.61	21.45	22.73	27.11	27.12	3.95	4.42	2.34	10.09	13.67	28.85	38.48	15.25	2.17	2.70	15.82	6.61	0.22	12.73	17.15	14.65	32.43	18.65	9.23
25	I3_AR10	ActiveIntronRegion	0	5.71	3.26	2.04	9.23	5.46	31.78	20.60	15.24	21.87	29.37	0.86	4.15	2.39	8.05	5.45	18.47	40.52	12.65	1.12	2.19	25.24	0.96	0.51	11.51	16.14	17.71	24.01	22.17	1.77
26	I3_AR11	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	5.10	0.00	0.00	4.24	0.00	5.09	0.00	0.00	16.81	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.80	3.07
27	I3_AR12	ActiveIntronRegion	0	1.68	2.68	5.88	9.38	6.71	2.17	0.49	0.44	2.83	2.45	0.57	1.71	0.23	5.01	0.00	5.19	11.98	4.93	0.76	1.64	1.35	0.56	0.86	2.53	1.95	0.50	0.65	2.69	0.24
28	I3_SR5	SilentIntronRegion	0	1.44	0.39	0.69	0.00	2.02	2.97	0.67	0.62	1.86	3.36	0.00	1.63	0.00	1.05	0.93	2.46	2.40	3.53	0.00	0.47	0.73	0.12	0.61	2.23	2.50	1.68	0.62	3.62	0.22
29	ER4a	ExonRegion	0	33.89	19.68	3.27	1.63	9.74	10.60	21.87	18.94	9.39	10.82	2.38	8.44	6.45	15.64	23.65	29.04	29.58	19.06	1.94	7.30	5.67	16.68	7.60	22.07	9.10	8.07	3.79	9.43	3.46
30	E4_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.43	0.00	0.00	0.00	0.00	0.00	0.00	3.60	2.50	0.00	0.00	0.00	1.56	0.00	0.00	3.05	0.00	0.00	0.00	8.09	0.00
31	E4a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
32	ER5a	ExonRegion	0	109.64	40.51	35.68	61.34	92.04	26.23	57.72	51.88	26.93	42.50	11.16	31.51	14.33	39.24	57.83	47.86	70.62	36.05	5.51	16.56	22.17	41.06	26.46	75.30	37.25	23.25	14.33	39.84	8.38
33	E5a_E6a	KnownJunction	0	74.38	22.98	0.00	21.57	7.37	9.28	17.68	15.08	4.11	23.25	0.00	0.00	0.00	0.00	7.57	13.77	42.77	50.86	0.00	7.77	0.00	25.91	0.00	32.60	18.22	15.96	4.72	1.93	3.20
34	E5a_E6b	KnownJunction	0	81.16	31.12	28.65	21.57	54.97	19.30	70.32	28.81	37.37	20.93	4.43	61.78	1.62	26.81	29.50	36.57	45.94	13.87	24.28	27.70	25.43	40.98	9.41	52.10	50.01	16.69	12.18	44.98	1.65
35	E6_Aa	NovelBoundary	0	3.01	4.65	1.32	0.00	0.00	1.96	0.00	8.71	3.08	5.55	0.00	3.16	0.00	1.91	0.00	0.00	10.33	0.00	0.00	4.13	8.82	0.00	0.00	11.90	0.00	0.00	0.00	0.00	0.00
36	E6_Ab	NovelBoundary	0	24.95	11.63	0.00	0.00	7.37	6.29	13.90	12.54	2.41	2.88	0.00	0.00	0.00	0.00	7.37	6.27	24.76	4.50	0.00	0.00	0.00	5.49	4.04	9.27	3.07	27.29	8.55	11.46	7.96
37	ER6a	ExonRegion	0	77.81	23.65	3.14	19.01	9.46	16.22	22.98	18.41	7.30	16.75	0.36	4.70	0.39	2.81	18.48	18.98	33.86	32.48	1.36	11.52	2.42	20.01	2.35	32.05	16.87	23.89	6.59	11.08	11.68
38	ER6b	ExonRegion	0	106.45	34.63	23.05	20.27	31.88	34.08	72.60	55.73	34.41	37.00	2.06	29.79	4.07	26.94	59.85	35.23	48.86	34.66	5.37	17.13	21.56	45.62	8.43	74.75	38.73	20.51	11.50	37.27	8.72
39	E6_Da	KnownBoundary	0	15.04	0.00	1.37	0.00	7.37	1.96	2.92	2.54	3.11	2.04	0.00	0.00	0.00	3.37	0.00	0.00	4.19	0.00	0.00	0.00	4.09	0.00	0.00	0.00	1.78	0.00	0.00	4.58	0.00
40	E6a_E7a	KnownJunction	0	0.00	0.00	1.54	0.00	0.00	0.00	0.00	0.00	1.74	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.14	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.01
41	ER6c	ExonRegion	0	11.31	2.58	0.00	4.16	0.00	2.80	2.06	1.30	6.30	1.36	0.00	1.02	0.00	0.00	2.64	1.14	5.97	10.01	0.00	0.00	1.34	0.60	0.00	4.01	0.28	0.00	0.00	4.22	0.89
42	ER7a	ExonRegion	0	37.46	15.06	17.89	9.58	17.59	9.34	34.45	20.00	18.92	19.41	6.03	27.37	6.08	12.97	25.75	19.13	36.94	20.84	3.70	9.31	8.61	24.47	24.10	32.04	20.57	11.67	12.35	23.60	6.11
43	E7a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
44	ER8a	ExonRegion	0	32.80	9.22	18.58	5.76	12.36	4.40	8.42	4.65	10.52	5.54	2.06	11.36	1.31	10.90	9.93	6.92	17.87	6.20	0.00	4.12	2.36	11.35	3.25	20.54	7.45	2.78	3.70	9.84	2.46
45	E8a_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
46	ER9a	ExonRegion	0	7.85	5.39	7.40	11.41	2.41	2.40	10.56	6.35	10.38	3.51	2.96	12.98	0.78	2.28	14.76	10.33	11.30	5.75	0.00	1.59	3.10	7.42	2.70	6.25	5.96	5.30	4.85	6.05	3.27
47	E9_Da	NovelBoundary	0	2.65	13.28	0.00	0.00	6.48	0.00	5.32	2.24	3.44	0.00	0.00	6.66	1.59	4.65	8.37	14.76	13.87	0.00	0.00	0.00	0.00	2.19	0.00	5.74	5.49	1.67	0.00	0.00	3.43
48	E9a_E10a	KnownJunction	0	24.95	21.91	6.93	40.12	11.94	7.06	30.09	33.09	30.73	5.39	2.59	38.22	0.00	1.04	7.97	31.52	32.32	13.87	0.00	7.11	3.89	21.49	4.38	13.94	17.50	20.99	19.23	40.80	8.12
49	ER10a	ExonRegion	0	13.94	14.02	3.60	5.74	1.82	9.21	19.45	38.11	36.12	5.76	4.10	35.52	17.47	11.55	20.10	18.66	44.69	10.24	0.00	17.18	8.72	24.80	9.04	31.38	14.32	14.15	6.75	13.60	19.69
50	E10_Da	NovelBoundary	0	2.71	0.00	1.99	0.00	0.00	0.00	0.00	6.97	0.00	1.88	0.00	0.00	0.00	0.00	0.00	0.00	2.66	0.00	0.00	0.00	0.00	0.00	2.46	2.33	3.33	0.00	0.00	0.00	0.00
51	E10a_E11a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
52	I10_AR1	ActiveIntronRegion	0	0.00	1.26	0.00	0.00	0.00	0.00	0.00	1.35	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.77	0.00	5.62	1.43	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
53	I10_AR3	ActiveIntronRegion	0	0.00	1.91	0.81	0.00	0.00	0.00	0.75	0.51	0.00	0.00	0.00	1.01	0.00	0.25	2.74	0.00	0.00	1.14	0.00	0.00	0.00	0.00	0.80	4.93	0.00	0.00	0.00	0.00	0.00
54	ER11a	ExonRegion	0	40.63	17.23	3.11	1.48	6.21	12.89	43.29	47.23	39.11	14.27	7.09	40.17	7.55	18.19	64.12	40.64	36.88	15.82	2.36	15.89	15.28	32.50	10.25	61.67	40.10	14.05	14.23	21.95	8.87
55	E11_Da	NovelBoundary	0	2.83	0.00	2.69	0.00	0.00	0.00	0.00	0.00	4.75	0.00	0.00	4.70	0.00	2.06	0.00	17.90	4.84	4.62	0.00	0.00	1.68	0.00	0.00	5.32	1.63	0.00	0.00	0.00	0.00
56	E11a_E12a	KnownJunction	0	30.38	17.16	13.43	9.71	31.10	15.31	35.53	44.14	38.95	18.57	0.00	34.82	3.06	19.08	71.95	64.49	53.84	46.23	0.00	11.50	11.83	36.90	8.91	102.52	57.21	14.50	28.33	41.11	1.25
57	ER12a	ExonRegion	0	25.18	11.44	8.27	4.89	7.15	9.40	20.35	22.05	27.84	5.02	2.84	35.64	11.65	15.89	23.84	12.69	40.90	6.82	0.76	10.72	6.09	15.29	5.54	28.84	16.35	6.43	11.29	16.38	11.87