Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	TEAD4	Gene	0	9.24	17.38	12.91	0.95	1.81	4.32	5.86	16.60	17.31	10.08	4.37	5.26	6.39	13.18	2.09	5.51	9.16	18.13	10.98	4.13	10.71	5.81	12.53	32.98	18.29	6.02	10.07	6.77	8.51
2	358409	Transcript	0	2.95	3.88	0.00	0.00	0.00	0.00	2.86	0.00	0.00	0.00	2.91	0.00	0.00	0.95	0.00	3.82	0.00	0.00	0.00	4.13	2.05	0.00	0.00	2.39	1.74	0.00	0.00	0.00	0.00
3	359864	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
4	443986	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
5	397122	Transcript	0	0.71	0.00	0.21	0.00	0.03	0.00	0.34	2.45	0.86	0.48	0.02	0.23	0.00	0.02	0.00	0.00	0.04	0.01	0.00	1.65	0.65	0.57	0.54	0.44	0.42	0.03	0.01	0.15	0.19
6	ER1a	ExonRegion	0	1.70	1.71	0.00	0.00	0.00	0.73	0.00	1.98	0.00	1.19	0.00	0.66	0.51	0.16	0.00	0.16	0.44	5.15	0.80	0.00	0.00	1.63	3.15	2.91	1.73	0.97	0.00	2.65	1.12
7	E1_Ab	KnownBoundary	0	3.01	0.00	1.05	0.00	0.00	0.00	0.00	4.88	0.00	2.00	0.00	0.00	1.43	1.04	0.00	0.00	2.30	4.62	8.09	0.00	0.00	4.67	2.17	2.87	1.67	3.60	0.00	9.12	6.01
8	ER1b	ExonRegion	0	1.00	0.00	0.58	0.00	6.85	0.88	0.00	1.64	0.62	3.22	2.06	0.00	0.97	0.55	0.00	1.99	4.13	2.49	7.35	0.00	1.35	2.12	5.01	7.26	0.92	4.88	1.47	7.34	4.84
9	E1a_E2b	KnownJunction	0	0.00	0.00	2.34	0.00	12.53	1.76	0.00	0.00	3.05	0.00	6.20	0.00	1.62	0.00	0.00	0.00	5.09	4.62	0.00	0.00	4.01	0.00	4.73	5.50	0.00	8.58	1.84	0.00	5.12
10	E2_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.84	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.86	4.08	0.00	1.98	0.00
11	ER2a	ExonRegion	0	1.43	0.00	0.42	0.00	0.07	0.01	0.67	0.13	0.40	0.96	0.03	0.47	0.01	0.04	0.00	0.00	0.07	0.02	0.00	0.00	1.31	1.14	1.09	0.89	0.84	0.05	0.01	0.30	0.39
12	E2_Ab	KnownBoundary	0	0.00	0.00	1.22	0.00	0.00	0.00	0.00	2.04	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.17	1.80	2.17	2.45	1.67	0.00	0.00	3.95	1.35
13	ER2b	ExonRegion	0	6.97	1.79	4.82	0.00	1.14	1.52	1.84	4.44	5.10	1.30	1.99	2.65	1.00	4.03	0.00	3.22	2.94	11.95	0.25	2.78	4.14	1.65	4.62	9.68	3.68	6.12	0.10	2.29	1.93
14	E2_Da	NovelBoundary	0	3.01	0.00	0.00	0.00	0.00	0.00	2.69	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.08	0.00	0.00	0.00	2.05	0.00	0.00	0.00	1.63	1.76	0.00	0.00	0.00
15	E2a_E3a	KnownJunction	0	10.15	0.00	3.29	0.00	0.00	5.49	4.52	7.12	2.92	4.03	0.00	0.00	0.00	9.37	0.00	3.52	1.19	23.89	0.00	0.00	5.58	4.23	6.80	3.05	7.08	3.35	0.00	4.04	0.00
16	E2a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.78	1.31	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.31	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
17	ER3a	ExonRegion	0	6.82	7.87	7.87	2.67	0.00	4.27	7.11	19.40	11.68	7.22	2.36	6.20	4.77	13.40	2.77	4.79	9.16	15.44	6.02	3.89	7.83	5.62	10.43	22.17	16.45	4.89	3.80	6.21	4.84
18	E3a_E4a	KnownJunction	0	7.67	8.24	12.93	8.20	0.00	12.28	14.82	38.67	15.93	13.26	4.71	10.42	10.00	28.38	0.00	0.00	13.46	9.25	16.18	6.78	20.30	4.76	6.60	44.98	20.99	5.79	7.26	6.47	6.54
19	E3a_E5a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.37	2.19	0.00	0.00	0.00	0.00	0.00	0.00	0.00
20	E3a_E6a	NovelJunction	0	2.77	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
21	ER4a	ExonRegion	0	24.20	12.23	16.83	0.79	3.76	5.14	11.41	31.16	15.19	9.71	3.70	8.49	7.51	22.15	0.00	3.93	9.25	20.62	16.85	6.14	19.62	4.47	8.21	38.72	20.32	2.78	3.86	2.63	6.94
22	E4a_E5a	KnownJunction	0	21.53	22.40	15.80	0.00	0.00	0.00	8.01	21.40	21.41	12.18	0.00	7.92	8.25	15.42	0.00	7.65	7.09	23.12	8.09	16.21	11.75	6.61	10.59	34.09	16.10	2.19	4.82	0.00	11.75
23	ER5a	ExonRegion	0	14.09	20.60	14.69	0.00	3.80	3.99	4.70	13.56	17.26	10.38	2.46	7.40	5.42	15.53	1.78	11.49	11.42	27.94	11.71	7.58	13.18	9.96	16.22	25.71	19.94	5.16	11.11	9.99	6.41
24	E5a_E6a	KnownJunction	1	10.68	11.44	18.21	0.00	0.00	1.92	0.00	10.95	22.05	18.73	0.00	11.51	4.39	13.09	8.37	7.65	14.81	18.49	8.09	4.13	13.24	14.39	27.92	22.91	21.56	8.37	7.36	15.28	6.31
25	E5a_E7a	KnownJunction	0	2.95	3.88	0.00	0.00	0.00	0.00	2.86	0.00	0.00	0.00	2.91	0.00	0.00	0.95	0.00	3.82	0.00	0.00	0.00	4.13	2.05	0.00	0.00	2.39	1.74	0.00	0.00	0.00	0.00
26	I5_AR3	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.20	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.00	0.00	0.00	0.00	0.00	0.00	0.00	2.61	0.00	0.00	0.00	0.00	0.00
27	I5_SR3	SilentIntronRegion	0	0.00	0.00	0.00	0.00	0.00	1.21	0.00	1.62	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.00	0.00	0.00	0.00	0.00	0.00	0.00	2.26	0.00	0.00	0.00	0.00	0.00
28	I5_SR4	SilentIntronRegion	0	0.00	0.00	0.00	0.00	0.00	0.64	0.00	0.00	0.78	1.34	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.89	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
29	ER6a	ExonRegion	0	18.03	14.97	13.44	0.00	0.12	4.77	9.59	15.43	13.67	12.80	0.70	7.59	6.14	17.46	0.96	3.73	8.35	24.48	1.96	2.79	12.66	5.27	17.28	39.32	16.38	6.35	5.48	9.31	7.71
30	E6a_E7a	KnownJunction	0	5.31	16.48	9.87	0.00	0.00	3.15	5.84	9.01	12.03	10.79	2.72	1.45	6.85	11.12	0.00	6.88	7.56	37.76	8.09	0.00	16.37	11.43	22.80	29.43	9.17	3.91	0.00	8.54	12.08
31	ER7a	ExonRegion	0	11.40	16.87	17.24	0.00	4.08	5.50	9.12	14.52	9.65	7.68	4.92	1.74	6.79	20.04	0.00	9.78	8.95	34.49	13.78	8.18	11.80	6.68	16.23	35.05	20.17	12.36	11.20	7.04	11.93
32	E7a_E8a	KnownJunction	0	22.36	29.96	18.84	0.00	5.45	4.80	13.10	16.47	10.93	7.91	5.88	4.40	1.56	20.45	0.00	0.00	4.82	29.03	8.09	7.77	13.76	2.24	9.31	57.06	28.30	16.22	11.68	5.80	7.36
33	E8_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.51	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
34	ER8a	ExonRegion	0	19.52	27.63	20.64	0.00	4.00	4.42	8.53	9.07	10.73	19.18	4.29	4.35	5.78	20.10	4.60	6.06	12.11	31.48	16.00	7.13	17.17	3.54	18.50	37.03	18.86	10.05	7.20	8.91	6.04
35	E8a_E9a	KnownJunction	0	10.74	22.69	19.01	0.00	7.37	3.64	11.67	17.87	12.21	19.77	4.05	9.40	6.72	17.08	0.00	14.61	20.96	23.76	8.09	8.27	18.49	1.85	32.46	39.42	20.61	12.62	14.71	6.25	9.18
36	ER9a	ExonRegion	0	5.21	16.75	17.51	2.61	0.68	4.38	9.01	16.69	13.36	14.27	5.60	5.13	8.65	12.83	0.44	6.83	12.91	20.51	12.25	6.18	11.53	3.46	16.15	40.93	14.98	7.75	9.45	5.13	7.75
37	E9a_E10a	KnownJunction	0	5.90	40.82	31.72	0.00	0.00	6.68	10.64	4.13	29.08	19.13	2.82	4.13	10.13	18.52	7.57	5.81	14.18	13.87	24.28	6.62	24.35	4.52	21.62	58.74	26.41	4.33	39.66	1.84	7.96
38	E9a_E11a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.14	0.00	0.00	0.00	0.00	0.00	0.00	0.00
39	E10_Aa	NovelBoundary	0	3.01	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.02	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
40	ER10a	ExonRegion	0	10.64	30.90	29.70	2.10	6.99	7.25	8.67	22.81	38.32	20.34	9.49	9.94	8.38	25.30	2.99	11.40	18.28	28.14	22.34	6.96	24.10	8.05	21.83	66.48	43.71	14.53	24.01	12.24	13.75
41	E10_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.81	0.00	0.00	0.00	0.00	0.00
42	E10a_E11a	KnownJunction	0	25.66	79.11	23.99	0.00	5.45	12.97	5.09	30.41	57.43	25.76	10.28	11.72	5.60	28.65	0.00	9.94	28.56	19.26	40.46	4.13	20.30	5.59	25.51	102.34	68.08	24.89	20.38	8.00	19.31
43	ER11a	ExonRegion	0	14.67	44.66	20.40	0.00	0.21	8.93	9.36	34.60	38.50	17.10	8.40	10.53	8.33	21.56	5.64	9.03	18.66	27.12	19.77	6.92	17.26	14.09	22.39	66.70	40.32	7.87	23.24	8.57	18.94
44	E11a_E12a	KnownJunction	0	20.59	50.51	35.63	0.00	0.00	9.32	5.26	33.84	54.48	37.91	8.73	9.01	13.92	25.61	0.00	17.14	16.09	23.12	40.46	7.11	22.02	6.76	14.68	64.54	37.89	13.65	32.40	6.16	17.00
45	ER12a	ExonRegion	0	12.68	39.18	21.98	0.00	1.63	8.25	6.88	36.71	39.93	18.18	10.15	6.77	16.43	21.64	4.91	10.11	15.34	27.72	27.10	5.62	14.45	14.14	16.17	59.80	36.76	6.48	21.15	11.11	18.05
46	E12a_E13a	KnownJunction	0	11.27	21.23	5.83	0.00	0.00	3.49	5.72	14.63	25.67	11.14	15.44	11.02	2.93	14.16	0.00	7.19	12.74	27.74	8.09	0.00	11.47	11.67	13.64	43.61	15.38	7.34	8.10	14.56	15.35
47	ER13a	ExonRegion	0	6.64	15.90	9.23	1.19	1.63	2.96	3.03	11.58	16.04	6.40	4.63	2.95	7.55	7.73	2.31	3.23	4.37	12.85	9.84	2.63	7.64	3.45	10.15	24.79	9.01	4.22	12.35	6.47	9.61
48	ER13b	ExonRegion	0	0.00	0.00	0.56	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.84	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.66	0.00	0.89
49	IG28_SR1	SilentIntergenicRegion	0	1.36	1.26	1.20	0.00	0.00	1.76	0.22	0.20	1.02	1.66	0.00	0.72	0.96	0.82	0.00	1.25	0.80	2.20	0.34	0.59	2.06	0.38	3.71	2.71	0.98	1.91	3.90	1.04	0.72
50	IG28_AR1	ActiveIntergenicRegion	0	0.58	0.75	0.28	0.00	0.00	1.27	0.27	0.00	1.11	2.13	0.16	1.39	0.00	0.78	0.00	0.89	0.00	1.64	0.00	0.00	2.91	0.00	4.24	4.30	1.62	0.54	1.70	0.86	0.26
51	IG28_SR2	SilentIntergenicRegion	0	0.36	4.34	1.45	0.00	0.00	0.30	0.00	0.64	1.07	2.43	0.62	0.96	1.01	1.11	0.00	1.14	1.67	0.74	1.00	0.96	1.13	0.00	1.19	4.36	1.37	2.95	1.13	1.13	0.58
52	IG28_AR2	ActiveIntergenicRegion	0	0.92	2.13	1.11	0.00	1.85	0.96	0.10	0.17	1.17	2.55	0.68	2.04	0.58	1.09	0.00	1.10	1.94	3.49	1.84	0.00	1.99	0.17	3.78	7.05	2.40	1.58	1.69	0.85	0.63
53	IG28_AR4	ActiveIntergenicRegion	0	0.46	0.69	0.54	0.00	0.53	0.89	0.00	0.46	2.56	1.71	0.38	0.49	0.42	1.85	0.50	0.80	0.80	3.76	1.03	0.00	2.15	0.39	3.11	4.07	2.21	0.68	1.58	1.23	0.14
54	IG28_AR5	ActiveIntergenicRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.84	1.12	0.00	0.00	1.15	0.00	2.07	0.00	0.00	0.00	4.68	0.00	0.00	0.00	0.00	1.81	2.15	2.14	1.57	0.00	0.00	0.00
55	IG28_AR6	ActiveIntergenicRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.84	1.12	0.00	0.00	0.00	0.00	0.91	0.00	0.00	0.00	2.73	0.00	0.00	0.00	0.00	1.81	0.92	0.61	1.57	0.00	0.00	0.00
56	IG28_AR7	ActiveIntergenicRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.28	1.12	0.00	0.00	0.00	0.00	0.91	0.00	0.00	0.00	1.26	0.00	0.00	0.00	0.00	1.81	0.00	0.00	1.57	0.00	0.00	0.00
57	IG28_AR8	ActiveIntergenicRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.12	0.00	0.00	0.00	0.00	0.45	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.51	0.00	0.00	1.57	0.00	0.00	0.00
58	IG28_SR4	SilentIntergenicRegion	0	0.82	0.00	0.00	0.00	1.86	1.05	0.00	0.70	4.54	2.20	0.91	0.94	0.00	0.35	0.00	3.78	1.14	5.13	1.22	1.05	4.34	0.00	2.75	4.91	6.53	1.79	3.49	0.62	0.00
59	IG28_AR9	ActiveIntergenicRegion	0	1.44	2.13	4.49	0.00	0.00	1.66	0.27	0.99	4.83	3.62	0.47	1.91	2.53	2.37	1.48	1.67	2.01	1.56	2.15	0.00	3.26	0.00	5.09	15.11	4.71	2.54	2.63	1.32	2.97