Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	SPSB2	Gene	0	27.85	12.78	7.77	40.32	11.28	11.68	24.11	11.61	20.29	12.91	5.64	16.44	12.30	28.70	62.03	33.11	44.23	23.67	17.59	37.67	12.33	38.85	18.57	22.67	16.08	30.24	4.12	17.32	20.97
2	437851	Transcript	0	0.72	1.37	0.00	0.00	0.41	0.79	0.17	0.00	0.14	0.24	0.00	0.10	0.71	0.27	4.12	1.17	0.25	0.78	1.85	0.00	1.57	0.00	0.61	0.54	0.59	0.93	0.00	0.41	0.40
3	432205	Transcript	0	0.00	0.01	0.00	0.00	0.00	0.17	0.00	0.00	0.02	0.00	0.00	0.00	0.00	0.00	0.69	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.01	0.00
4	229274	Transcript	0	31.75	19.17	12.10	56.39	16.30	14.79	31.02	10.79	26.94	16.80	9.16	17.92	19.14	34.72	79.74	40.97	56.36	26.50	24.43	43.66	10.44	49.72	17.22	25.93	23.23	37.89	8.47	16.17	21.56
5	ER1a	ExonRegion	0	0.00	2.23	0.00	0.00	0.00	1.30	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.68	0.00	1.80	3.07	0.00	4.12	0.00	0.00	0.00	1.38	0.00	0.00	0.00	0.00
6	E1_Da	NovelBoundary	1	3.01	4.85	2.59	0.00	0.00	5.56	0.00	0.00	0.00	3.67	3.13	4.82	4.20	5.92	8.37	3.67	12.58	9.25	0.00	0.00	2.01	0.00	0.00	10.65	1.93	6.48	0.00	13.16	5.15
7	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
8	Ix	Intron	0	6.30	20.52	4.68	11.86	11.44	14.59	5.19	2.45	14.29	15.92	14.82	6.35	7.77	14.82	21.92	14.94	12.07	10.72	15.71	5.81	13.11	6.87	7.39	22.83	12.81	10.33	18.93	13.03	7.81
9	Ix_SR1	SilentIntronRegion	0	0.46	1.68	0.49	0.69	0.53	2.92	0.22	0.00	2.10	1.22	0.57	0.71	0.63	2.26	4.42	1.26	3.37	2.01	2.06	1.78	1.19	0.19	0.55	3.80	1.36	1.73	1.24	1.74	1.06
10	Ix_AR1	ActiveIntronRegion	0	10.67	34.61	7.82	20.21	19.61	23.32	8.90	4.29	23.42	26.91	25.48	10.56	13.11	24.22	35.01	25.17	18.58	17.25	25.91	8.83	22.02	11.87	12.51	37.07	21.37	16.76	32.17	21.48	12.86
11	E2_Aa	NovelBoundary	0	5.01	0.00	14.82	30.63	7.37	3.53	0.00	0.00	4.81	2.04	1.55	4.28	1.43	1.97	0.00	0.00	6.98	0.00	16.18	0.00	0.00	0.00	10.64	5.14	6.86	10.81	11.18	4.13	2.97
12	ER2a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.01	1.05	0.00	2.38	0.00	0.00	0.00	0.00	0.06	0.17	0.05	0.73	0.03	0.00	0.00	0.71	0.00	0.00	1.12	0.00	0.82	0.00	2.54	1.53
13	E2_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.82	0.00	4.62	0.00	0.00	3.81	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
14	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	7.66
15	E3_Aa	NovelBoundary	0	0.00	9.60	0.00	0.00	0.00	0.00	2.86	0.00	2.98	0.00	0.00	0.00	0.00	3.46	16.54	0.00	5.00	0.00	0.00	0.00	3.93	0.00	0.00	0.00	0.00	5.58	0.00	6.11	1.62
16	ER3a	ExonRegion	0	1.07	1.58	0.00	0.00	0.00	0.69	3.02	0.00	2.39	0.00	0.00	0.92	0.65	1.30	12.24	2.48	2.28	2.89	1.60	0.00	3.47	1.80	0.00	2.15	0.00	0.79	0.00	5.67	3.87
17	E3_Da	NovelBoundary	0	5.25	4.27	0.00	0.00	0.00	1.53	0.00	0.00	7.25	5.79	1.33	0.00	0.00	2.33	7.97	3.82	7.92	0.00	0.00	0.00	2.05	0.00	2.27	6.10	0.00	2.19	0.00	10.56	0.00
18	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.60	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
19	E3a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
20	E4_Aa	NovelBoundary	0	0.00	8.05	0.00	0.00	0.00	3.41	0.00	0.00	2.83	5.19	1.61	1.30	0.00	0.86	16.34	3.21	3.56	0.00	7.87	0.00	1.93	0.00	2.46	0.00	1.59	0.00	0.00	2.29	0.00
21	ER4a	ExonRegion	0	2.90	3.26	0.00	0.00	1.65	1.86	0.68	0.00	0.57	0.98	0.00	0.42	2.85	1.07	16.47	0.00	1.01	1.30	4.32	0.00	0.57	0.00	2.44	2.18	0.97	3.72	0.00	1.65	1.58
22	E4_Da	NovelBoundary	0	2.24	7.37	1.54	0.00	0.00	1.46	0.00	0.00	0.00	1.84	0.00	0.00	0.00	1.37	26.71	0.00	4.48	4.62	16.18	0.00	4.01	0.00	0.00	0.00	1.82	1.72	0.00	0.00	0.00
23	Ix	Intron	0	1.16	3.24	0.30	0.00	2.20	1.36	0.54	0.66	3.84	1.82	0.32	0.83	1.34	1.42	8.61	1.79	2.02	2.63	2.59	0.68	0.51	0.32	0.49	1.16	0.90	1.56	0.83	1.76	0.12
24	Ix_SR1	SilentIntronRegion	0	1.16	3.25	0.30	0.00	2.20	1.36	0.55	0.66	3.85	1.82	0.32	0.83	1.34	1.43	8.62	1.79	2.02	2.64	2.60	0.68	0.52	0.33	0.49	1.17	0.90	1.56	0.83	1.77	0.12
25	ER5a	ExonRegion	0	0.00	0.02	0.00	0.00	0.00	0.52	0.00	0.00	0.06	0.00	0.00	0.00	0.00	0.00	2.06	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.02	0.00
26	E5_Da	NovelBoundary	0	2.42	0.00	0.00	0.00	0.00	0.00	2.92	2.09	0.00	0.00	0.00	0.00	0.00	0.00	8.37	0.00	3.47	5.01	0.00	0.00	0.00	0.00	0.00	6.10	1.74	1.85	2.39	0.00	3.33
27	E5a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
28	I5	Intron	0	1.09	0.00	0.00	18.28	0.00	0.00	0.00	0.94	0.00	0.00	0.00	0.00	0.66	0.00	7.95	2.18	0.76	9.83	1.63	7.65	0.00	5.52	0.00	1.10	0.00	0.80	0.00	3.33	1.37
29	I5_SR1	SilentIntronRegion	0	0.00	0.00	0.00	2.44	0.00	0.00	0.00	1.70	0.00	0.00	0.00	0.00	0.87	0.00	0.00	0.94	0.93	1.01	0.00	0.00	0.00	2.87	0.00	1.27	0.00	0.00	0.00	3.26	0.00
30	I5_AR1	ActiveIntronRegion	0	1.54	0.00	0.00	24.82	0.00	0.00	0.00	0.67	0.00	0.00	0.00	0.00	0.60	0.00	11.20	2.71	0.72	13.45	2.29	10.77	0.00	6.68	0.00	1.06	0.00	1.13	0.00	3.40	1.93
31	E6_Aa	NovelBoundary	0	8.20	0.00	4.58	124.67	0.00	3.45	15.51	4.38	3.05	5.27	0.00	2.86	4.39	4.32	51.62	33.12	8.73	23.37	0.00	11.66	5.58	8.70	4.24	2.69	3.52	20.86	0.00	10.24	21.72
32	ER6a	ExonRegion	0	9.92	4.89	5.06	39.79	13.55	12.85	9.00	1.11	8.39	11.92	8.72	0.12	6.86	5.15	39.86	19.01	10.41	14.03	13.26	10.59	1.03	11.95	9.29	13.56	13.66	7.05	7.58	2.77	8.65
33	E6_Da	NovelBoundary	0	8.32	4.85	4.43	18.55	22.11	8.52	11.33	1.84	25.67	19.29	0.00	14.94	1.62	11.43	68.96	20.43	40.34	18.37	0.00	29.28	1.93	10.55	9.36	40.85	8.03	28.32	0.00	23.09	27.14
34	E6a_E7a	KnownJunction	0	18.99	8.82	9.69	72.90	18.27	18.19	14.25	2.54	11.54	21.77	11.01	0.00	14.78	10.30	26.51	27.00	30.91	0.00	8.09	19.10	2.05	19.11	15.96	29.13	21.25	15.62	18.79	4.18	14.33
35	I6	Intron	0	11.02	3.13	1.38	8.85	5.02	5.65	5.80	2.27	10.84	8.31	2.20	3.30	4.93	9.31	40.42	20.43	15.66	17.63	15.77	31.76	5.28	21.87	10.78	17.69	4.12	14.87	0.38	16.76	20.23
36	I6_AR1	ActiveIntronRegion	0	11.11	3.15	1.39	8.92	5.06	5.69	5.85	2.29	10.93	8.38	2.22	3.32	4.97	9.38	40.75	20.60	15.78	17.77	15.90	32.01	5.32	22.05	10.87	17.84	4.15	14.99	0.38	16.90	20.39
37	E7_Aa	NovelBoundary	0	19.70	4.46	1.30	21.57	7.07	7.02	18.65	4.93	13.58	10.95	4.30	8.13	1.43	24.93	26.31	9.33	39.57	9.25	32.37	38.79	11.31	15.27	17.58	49.41	11.90	25.06	2.44	20.40	24.56
38	ER7a	ExonRegion	0	33.93	12.15	11.35	74.28	16.83	17.08	28.03	15.16	20.46	21.67	7.42	16.45	13.00	34.41	79.09	47.94	50.30	31.92	23.16	56.86	14.65	46.11	29.94	40.70	23.55	37.32	6.55	19.84	27.75
39	E7_Da	KnownBoundary	0	44.77	13.57	16.47	147.32	7.22	14.89	31.35	29.81	25.61	18.61	7.28	16.75	6.78	31.93	68.77	58.22	49.70	33.13	16.18	35.48	20.34	67.68	32.46	30.51	23.87	42.14	17.79	17.61	17.73
40	ER7b	ExonRegion	0	56.43	17.68	14.50	55.54	19.62	20.68	48.13	22.17	35.82	18.83	8.62	34.84	23.48	48.60	101.56	61.65	83.94	40.35	25.98	59.75	21.64	69.82	33.09	33.14	27.57	58.20	6.60	33.55	36.66
41	E7_Db	NovelBoundary	0	11.03	4.85	0.00	0.00	0.00	1.88	2.52	0.00	4.99	3.52	1.39	2.83	7.52	13.07	51.82	7.27	10.65	9.12	0.00	7.69	9.27	0.00	23.00	8.79	3.49	14.25	0.00	14.15	2.97
42	E7b_E8a	KnownJunction	0	42.23	39.46	22.72	63.41	17.83	10.17	54.93	13.64	47.17	14.90	9.05	33.61	34.39	65.18	147.50	61.50	95.87	47.01	48.55	76.17	10.59	91.64	8.91	27.40	34.40	71.71	4.72	19.68	21.39
43	I7	Intron	0	9.29	8.70	1.86	1.19	2.98	6.50	2.80	1.94	6.60	4.89	2.18	4.35	2.88	9.52	33.40	11.94	16.34	22.65	11.54	7.92	9.27	3.41	12.86	9.08	6.99	14.49	3.97	16.30	5.23
44	I7_AR1	ActiveIntronRegion	0	9.33	10.51	2.11	1.00	3.98	6.72	3.01	1.40	5.78	4.59	2.35	4.14	2.85	9.88	33.66	11.58	16.98	24.00	13.33	8.14	10.78	2.78	14.14	10.26	8.43	17.89	4.90	18.71	5.71
45	I7_SR1	SilentIntronRegion	0	10.13	5.23	1.60	0.78	1.55	7.70	2.11	3.18	6.34	5.80	2.32	4.73	2.75	9.78	31.37	13.93	13.52	23.95	1.58	7.78	3.89	5.13	14.96	8.33	3.48	4.26	1.49	10.11	6.80
46	I7_AR2	ActiveIntronRegion	0	8.69	3.84	1.03	2.22	0.00	4.95	2.42	3.34	10.07	5.59	1.47	5.01	3.08	8.08	34.01	12.24	15.78	16.84	10.86	7.24	6.81	4.84	6.69	5.05	3.57	7.73	1.90	10.89	2.45
47	E8_Aa	NovelBoundary	0	7.79	13.48	1.54	0.00	0.00	1.92	0.00	1.99	7.40	5.99	0.00	4.04	0.00	9.79	9.37	10.56	12.11	27.61	0.00	0.00	5.33	9.72	9.70	13.46	1.44	0.00	2.53	5.89	1.39
48	ER8a	ExonRegion	0	31.18	24.98	8.50	50.32	12.22	12.09	28.81	14.49	31.77	16.56	8.42	21.05	16.18	44.36	83.27	35.70	60.65	31.11	26.26	52.70	16.89	56.07	18.85	26.42	19.27	36.87	4.67	20.67	26.78