Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	CD69	Gene	0	177.33	133.24	147.84	424.86	410.68	190.46	956.62	406.51	304.09	171.73	296.25	135.68	292.58	133.58	164.43	133.73	209.69	24.85	205.08	90.37	239.92	85.33	52.77	174.02	14.78	41.99	270.48	9.31	47.51
2	416624	Transcript	0	3.06	3.60	1.02	10.79	8.30	7.59	3.74	3.07	1.66	4.06	0.00	3.95	0.00	2.94	0.00	2.41	0.00	1.04	14.87	1.47	7.47	2.23	0.00	7.68	0.00	0.00	0.00	0.00	0.06
3	228434	Transcript	0	214.83	113.60	146.08	557.12	440.55	197.97	1093.02	566.19	238.61	156.01	382.64	133.28	316.51	149.77	139.37	110.27	203.21	23.74	195.68	90.07	254.64	100.99	51.10	194.06	14.23	52.04	351.38	9.70	43.24
4	ER1a	ExonRegion	1	197.16	130.85	371.51	820.48	904.96	131.24	869.29	520.67	224.08	230.27	321.71	142.34	259.11	131.92	99.11	152.00	312.41	20.44	144.76	58.50	196.08	111.33	110.23	91.52	24.49	84.93	308.64	19.13	66.78
5	E1_Da	NovelBoundary	0	6.02	0.00	1.54	0.00	0.00	0.00	2.63	0.00	0.00	3.64	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.80	0.00	0.00	3.05	0.00	0.00	0.00	0.00	0.00
6	E1a_E2a	KnownJunction	1	68.95	48.86	24.77	90.16	69.12	41.40	310.56	219.32	94.68	38.11	47.10	38.82	92.38	76.51	33.09	28.92	24.11	0.00	40.46	33.33	35.38	50.27	10.69	53.18	3.71	15.58	24.35	4.22	10.96
7	I1	Intron	0	9.22	8.07	2.19	11.47	14.20	6.86	2.05	2.22	3.96	9.07	3.42	6.53	1.45	3.95	1.88	4.12	2.62	0.98	5.22	1.38	8.32	0.99	0.65	4.92	0.22	1.65	2.81	0.81	0.44
8	I1_AR1	ActiveIntronRegion	0	6.74	4.92	1.58	13.93	15.58	4.07	1.78	1.85	4.11	6.73	4.51	6.92	1.91	5.55	2.92	1.78	3.71	1.02	5.37	2.95	7.40	0.52	1.05	3.64	0.13	1.30	3.23	0.42	0.90
9	I1_AR2	ActiveIntronRegion	0	5.61	1.41	1.12	0.70	4.98	3.27	0.00	1.84	2.25	11.28	4.48	8.60	2.60	4.41	0.00	2.77	2.10	0.00	0.00	0.27	11.61	1.80	1.81	2.15	0.00	1.57	7.33	0.16	1.15
10	I1_SR1	SilentIntronRegion	0	7.09	6.90	1.87	11.99	11.57	6.25	1.57	1.46	4.44	10.30	3.88	6.74	1.76	3.28	2.06	3.44	2.52	0.77	6.23	1.70	8.65	1.24	1.01	5.45	0.24	1.25	3.30	0.82	0.33
11	I1_AR3	ActiveIntronRegion	0	15.94	10.57	3.58	11.09	19.76	9.65	2.64	3.62	3.37	10.74	3.54	7.85	1.46	4.34	1.53	7.00	2.93	1.18	4.18	0.66	8.32	1.61	0.32	5.25	0.43	1.78	1.96	1.07	0.20
12	I1_AR4	ActiveIntronRegion	0	0.00	3.28	0.00	0.00	4.98	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.81	0.00	0.00	4.01	0.00	0.00	0.00	11.41	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
13	I1_SR2	SilentIntronRegion	0	5.36	9.61	1.30	9.28	9.26	6.64	2.26	1.75	4.02	6.98	1.44	3.89	0.45	2.89	1.19	3.34	1.28	1.00	5.24	0.48	8.60	0.16	0.16	5.01	0.00	2.44	2.69	0.84	0.46
14	E2_Aa	NovelBoundary	0	22.41	4.65	5.73	0.00	13.85	10.13	2.92	4.43	8.31	11.06	4.84	4.10	4.33	8.15	0.00	3.82	3.83	0.00	16.18	2.98	7.78	4.62	2.51	14.24	0.00	7.98	0.00	2.29	1.55
15	ER2a	ExonRegion	0	304.04	182.97	63.11	82.76	82.54	191.64	1291.98	911.74	322.31	305.45	423.34	163.72	359.33	200.29	147.62	202.11	291.86	30.78	215.40	113.30	287.16	175.22	108.03	163.40	28.55	94.83	194.14	16.31	70.36
16	E2_Da	NovelBoundary	0	13.92	12.22	1.99	39.26	34.93	9.36	2.92	4.98	2.71	23.05	0.00	7.62	0.00	5.76	0.00	6.04	4.10	0.00	8.09	3.89	5.37	4.57	0.00	14.24	0.00	6.18	0.00	1.98	0.00
17	E2a_E3a	KnownJunction	1	181.14	103.64	71.48	116.47	77.52	126.96	1167.93	611.32	270.02	405.65	641.11	253.88	391.46	188.46	165.83	107.71	465.45	13.87	194.22	67.32	118.61	124.41	230.05	145.17	19.47	183.72	584.00	59.08	142.55
18	I2	Intron	0	10.77	14.89	1.15	15.90	22.38	8.47	2.88	2.36	6.49	10.53	3.99	6.69	3.41	4.03	1.45	4.11	2.50	0.66	5.82	1.82	12.93	1.24	0.80	11.24	0.63	2.87	1.90	0.24	2.37
19	I2_AR1	ActiveIntronRegion	0	8.91	13.97	0.74	16.89	24.66	9.77	2.84	1.92	6.30	9.59	4.32	6.20	3.57	3.13	1.94	4.51	1.91	0.96	5.04	1.66	11.58	1.07	1.17	8.66	0.23	3.03	0.44	0.01	1.48
20	I2_SR1	SilentIntronRegion	0	13.89	20.19	0.99	5.95	13.32	9.69	3.85	3.89	9.26	13.69	6.04	7.18	3.82	4.65	0.00	2.30	3.76	0.67	7.32	0.00	18.06	1.32	0.00	13.96	0.59	2.22	0.04	0.65	5.06
21	I2_AR2	ActiveIntronRegion	0	13.66	14.74	2.17	18.15	21.39	5.05	2.57	2.68	5.73	11.33	2.35	7.62	2.89	5.81	1.00	4.02	3.30	0.00	6.98	3.01	13.81	1.61	0.33	15.93	1.56	2.80	5.99	0.59	3.19
22	E3_Aa	NovelBoundary	0	16.75	28.31	2.69	18.33	30.06	7.94	4.81	12.54	7.49	13.58	8.64	8.04	10.86	6.45	7.97	7.04	4.43	4.62	8.09	0.00	7.54	7.00	2.51	11.48	1.63	6.18	26.84	2.29	0.00
23	ER3a	ExonRegion	0	265.64	117.62	376.25	654.96	652.68	130.48	881.73	804.93	215.54	173.82	322.85	143.58	294.66	172.24	107.08	100.71	247.34	20.88	137.70	94.78	168.83	154.86	76.88	175.43	17.62	69.78	267.52	12.02	43.95
24	E3_Da	NovelBoundary	0	11.74	27.05	7.13	49.61	92.99	21.10	16.13	6.92	17.60	8.95	4.68	17.29	16.85	9.75	8.37	7.57	4.16	4.62	32.37	7.61	21.82	10.74	2.41	24.23	0.00	2.19	0.00	0.00	0.00
25	E3a_E4a	KnownJunction	0	235.17	139.22	138.60	971.48	776.50	149.06	1194.02	742.61	230.53	156.19	415.77	107.35	309.30	175.46	64.18	69.69	203.89	13.87	234.68	83.53	221.85	148.62	54.27	193.08	19.47	55.62	257.78	8.27	39.15
26	E3_Db	NovelBoundary	0	31.85	76.30	3.39	58.02	34.78	12.32	34.16	2.19	24.48	16.74	7.88	25.48	0.00	5.49	0.00	11.25	6.98	0.00	56.65	0.00	23.79	0.00	0.00	24.70	3.86	0.00	4.47	0.00	0.00
27	ER3b	ExonRegion	0	3.06	3.60	1.02	10.79	8.30	7.59	3.74	3.07	1.66	4.06	0.00	3.95	0.00	2.94	0.00	2.41	0.00	1.04	14.87	1.47	7.47	2.23	0.00	7.68	0.00	0.00	0.00	0.00	0.06
28	I3	Intron	0	17.94	22.62	2.59	33.34	47.70	7.03	14.37	3.14	22.78	10.52	8.12	15.96	4.71	11.57	4.29	11.05	4.17	1.49	15.85	0.85	16.15	1.12	1.96	16.34	0.66	2.68	4.26	1.52	0.73
29	I3_AR1	ActiveIntronRegion	0	18.05	22.75	2.61	33.54	47.93	7.07	14.46	3.16	22.92	10.58	8.16	16.06	4.74	11.64	4.32	11.11	4.19	1.50	15.93	0.86	16.25	1.12	1.97	16.43	0.67	2.70	4.28	1.53	0.73
30	E4_Aa	NovelBoundary	0	41.17	25.69	4.24	59.32	102.87	27.20	18.42	15.43	18.33	12.54	7.31	25.15	4.68	22.53	8.37	15.68	8.89	0.00	64.74	0.00	41.03	6.47	0.00	36.73	3.30	3.95	0.00	0.00	0.00
31	ER4a	ExonRegion	0	260.12	74.32	187.52	453.24	345.12	205.63	1062.77	640.66	198.75	165.95	464.61	146.57	336.26	167.26	147.66	127.68	216.90	26.82	171.81	95.27	250.73	115.24	59.46	191.00	18.91	74.32	385.70	13.68	44.76
32	E4_Da	NovelBoundary	0	18.64	16.87	2.59	59.32	44.95	30.20	23.80	7.46	33.22	25.25	0.00	7.53	3.15	13.60	0.00	19.05	13.73	0.00	8.09	0.00	33.81	1.90	2.02	28.05	1.48	4.16	0.00	5.66	0.00
33	E4a_E5a	KnownJunction	0	223.91	101.99	172.61	429.23	288.26	226.18	1162.89	632.82	180.89	149.40	386.48	147.47	329.88	137.68	155.67	110.92	208.53	28.51	145.44	89.07	289.28	82.02	55.60	204.81	7.20	55.06	493.25	10.33	44.80
34	I4	Intron	0	17.66	16.02	1.27	29.14	47.91	9.61	15.62	3.29	17.71	9.23	5.61	15.41	4.20	8.65	5.77	12.32	5.50	1.43	17.66	3.01	18.17	2.05	0.78	20.63	1.63	2.13	2.97	0.97	0.98
35	I4_AR1	ActiveIntronRegion	0	18.08	17.68	1.32	30.23	50.20	9.87	17.40	3.64	18.31	8.66	5.65	15.92	4.60	8.43	5.69	12.45	5.80	1.35	17.68	3.30	20.11	2.14	0.83	18.99	1.70	2.17	2.77	0.64	1.19
36	I4_AR2	ActiveIntronRegion	0	15.89	8.38	1.03	24.33	37.74	8.50	7.48	1.71	15.08	12.05	5.52	13.16	2.40	9.78	6.25	11.84	4.15	1.79	17.77	1.70	9.26	1.66	0.56	28.55	1.33	1.94	3.96	2.52	0.00
37	E5_Aa	NovelBoundary	0	12.98	21.72	2.09	18.98	63.07	12.39	21.80	1.99	16.51	5.23	9.40	18.89	2.93	9.82	17.54	7.34	9.45	0.00	0.00	0.00	13.96	4.91	0.00	32.60	0.00	0.00	27.78	1.80	1.68
38	ER5a	ExonRegion	0	140.13	138.87	85.58	374.54	352.31	211.02	952.43	248.67	344.28	152.51	263.71	131.72	290.61	118.67	189.98	132.77	183.53	25.75	230.81	92.43	256.70	58.06	35.07	187.35	11.34	23.18	268.80	6.51	44.25
39	IG9_AR3	ActiveIntergenicRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.89	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
40	IG9_SR2	SilentIntergenicRegion	0	0.43	0.29	0.45	0.00	0.44	1.57	0.18	0.00	0.25	1.06	0.00	1.61	0.75	0.08	3.50	0.00	0.27	0.00	0.11	0.00	0.26	0.33	0.00	1.26	0.06	0.00	0.00	0.15	0.12
41	IG9_AR2	ActiveIntergenicRegion	0	5.17	1.09	0.32	0.00	0.48	1.36	0.20	0.72	2.39	1.70	0.00	5.46	0.29	0.31	10.18	0.24	0.15	0.38	1.45	0.00	0.23	0.60	0.00	0.94	1.06	0.15	4.32	0.77	0.00
42	IG9_AR1	ActiveIntergenicRegion	0	7.38	0.58	0.00	40.86	6.89	11.52	1.78	4.55	8.03	2.97	9.10	1.93	2.87	2.13	0.00	3.28	1.27	0.00	20.50	9.84	2.31	1.11	0.00	1.64	0.00	1.16	7.11	5.18	0.00