Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	LAG3	Gene	0	86.05	215.02	359.40	48.60	37.80	351.87	184.09	133.35	1714.35	399.41	92.85	144.97	329.28	210.78	109.75	123.85	67.56	110.15	53.02	7.17	160.43	342.82	145.84	247.39	75.39	80.04	92.02	14.19	142.93
2	441671	Transcript	0	1.24	1.64	1.77	0.00	0.00	2.91	0.00	6.02	12.06	10.38	0.00	1.43	2.90	3.84	0.00	2.04	0.46	0.21	1.39	0.00	0.82	5.82	0.97	2.15	0.00	0.00	0.00	0.00	0.00
3	203629	Transcript	0	104.69	371.50	554.05	63.29	41.39	459.01	278.74	201.71	2662.31	516.48	139.83	201.93	492.01	299.84	206.56	111.46	99.89	121.10	90.14	10.24	196.63	479.87	161.42	379.85	101.77	91.92	130.66	14.87	177.25
4	IG27_AR2	ActiveIntergenicRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.32	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.00	0.00	0.00	0.00	0.00	0.00	0.00	2.15	1.43	0.00	0.00	0.00	1.02
5	IG27_SR1	SilentIntergenicRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.00	0.00	0.00	0.00	0.00	0.00	0.00	2.15	0.18	0.00	0.00	0.00	0.00
6	IG27_AR3	ActiveIntergenicRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.91	0.00	0.00	0.88	0.00	7.45	0.00	0.00	0.00	0.00	2.15	1.35	0.00	0.00	0.00	0.00
7	ER1a	ExonRegion	0	68.65	127.54	106.13	55.88	39.56	456.08	174.48	69.44	1612.39	419.86	79.74	86.76	225.68	124.95	47.82	237.15	49.54	87.68	32.98	5.68	231.16	254.81	145.38	115.37	50.90	98.34	90.58	15.39	180.20
8	E1_Da	NovelBoundary	0	8.26	14.54	19.13	0.00	6.78	26.97	2.92	0.00	59.05	10.51	10.85	4.55	9.78	30.02	7.77	0.00	0.95	0.00	0.00	0.00	5.70	20.66	2.31	14.89	0.00	3.69	5.07	0.00	14.06
9	E1a_E2a	KnownJunction	1	61.11	102.19	140.97	55.43	7.22	106.59	41.08	51.16	712.80	128.98	11.01	46.78	113.43	105.27	43.85	45.59	12.02	69.99	16.18	0.00	65.70	171.23	52.06	115.92	19.51	15.02	9.34	5.44	21.85
10	E1a_E5a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.75	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.05	3.64	0.00	0.00	0.00	0.00
11	I1	Intron	0	10.50	10.78	19.11	0.00	3.55	49.40	10.63	6.68	77.51	15.50	7.56	6.50	12.69	21.76	12.68	9.78	7.04	8.92	6.38	0.00	5.96	22.90	7.55	13.27	2.85	4.56	2.99	0.59	8.62
12	I1_AR1	ActiveIntronRegion	0	10.58	10.86	19.24	0.00	3.57	49.75	10.71	6.73	78.06	15.61	7.61	6.54	12.78	21.91	12.77	9.85	7.09	8.98	6.42	0.00	6.01	23.07	7.60	13.37	2.87	4.60	3.01	0.60	8.68
13	E2_Aa	NovelBoundary	0	21.65	4.85	19.26	0.00	0.00	52.49	2.75	0.00	52.62	27.72	2.97	4.16	1.37	8.84	0.00	14.84	6.98	18.49	0.00	0.00	7.78	20.37	2.12	5.98	5.11	4.03	7.60	0.00	3.04
14	ER2a	ExonRegion	0	71.14	106.98	78.75	39.53	16.39	167.10	61.70	50.31	656.16	190.85	37.24	41.74	133.75	126.91	47.42	70.57	21.26	92.33	28.23	3.80	60.80	173.50	77.72	133.08	41.89	26.56	21.35	7.31	36.23
15	E2_Da	NovelBoundary	0	5.43	0.00	17.61	0.00	13.26	21.41	2.63	0.00	16.78	3.60	0.00	0.00	0.00	9.95	17.74	7.19	9.90	0.00	0.00	0.00	7.14	0.00	0.00	8.85	0.00	1.89	0.00	0.00	0.00
16	E2a_E3a	KnownJunction	0	54.38	58.66	60.99	18.77	6.63	200.93	105.90	35.38	1029.84	205.52	38.78	61.38	161.58	88.52	29.30	44.52	23.54	47.13	24.28	0.00	97.91	185.91	83.03	78.54	35.12	40.81	20.53	4.18	54.97
17	E2a_E4a	NovelJunction	0	3.01	0.00	0.00	0.00	0.00	3.45	0.00	0.00	7.06	1.96	0.00	2.59	9.27	2.13	0.00	0.00	0.00	0.00	0.00	0.00	1.72	2.38	0.00	0.00	0.00	4.38	0.00	0.00	0.00
18	E2a_E5a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.83	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
19	I2	Intron	0	3.74	1.40	4.37	0.00	0.71	12.58	2.93	1.61	13.29	4.62	0.52	2.42	0.75	7.50	10.28	2.88	3.04	2.61	0.93	0.80	1.04	2.36	0.79	2.81	0.62	0.69	0.00	0.47	1.17
20	I2_AR1	ActiveIntronRegion	0	3.86	1.52	4.56	0.00	0.75	13.14	3.12	1.63	13.99	4.79	0.56	2.61	0.79	7.74	10.65	2.93	3.23	2.66	0.77	0.86	1.05	2.55	0.85	3.04	0.61	0.74	0.00	0.51	1.26
21	E3_Aa	NovelBoundary	0	5.19	0.00	0.00	0.00	0.00	3.15	0.00	0.00	2.80	3.95	0.00	1.23	2.83	3.10	0.00	3.06	2.25	0.00	0.00	0.00	0.00	4.42	0.00	3.05	0.00	0.00	0.00	0.00	0.00
22	I2_SR1	SilentIntronRegion	0	2.31	0.00	2.06	0.00	0.00	5.83	0.56	1.40	4.58	2.54	0.00	0.00	0.36	4.57	5.82	2.43	0.68	2.07	3.08	0.00	0.91	0.00	0.00	0.00	0.86	0.00	0.00	0.00	0.00
23	ER3a	ExonRegion	0	64.68	68.29	167.12	15.94	18.46	143.70	70.70	44.48	523.23	195.29	19.18	62.25	125.88	98.98	62.34	51.19	27.25	92.18	26.95	3.58	59.34	171.02	85.22	96.81	32.22	42.38	22.52	7.33	57.41
24	E3a_E4a	KnownJunction	0	102.58	141.06	212.90	38.39	62.49	245.63	145.61	116.90	1180.77	271.99	47.55	124.43	194.51	157.95	103.65	65.33	59.33	108.01	40.24	10.83	89.33	333.42	130.31	246.62	66.26	81.24	48.11	8.94	93.46
25	I3	Intron	0	0.58	0.00	0.91	0.00	0.00	2.37	0.55	0.50	1.83	2.23	0.00	0.34	0.12	1.11	1.26	0.45	0.54	0.17	0.29	0.00	0.91	0.82	0.00	0.39	0.26	0.00	0.00	0.00	0.00
26	I3_SR1	SilentIntronRegion	0	0.59	0.00	0.91	0.00	0.00	2.38	0.55	0.50	1.84	2.24	0.00	0.34	0.12	1.11	1.26	0.45	0.54	0.18	0.29	0.00	0.91	0.82	0.00	0.39	0.26	0.00	0.00	0.00	0.00
27	E4_Aa	NovelBoundary	0	0.00	0.00	2.37	10.78	0.00	3.68	2.52	0.00	0.00	3.16	0.00	0.00	1.59	2.39	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.93	0.00	0.00	0.00	0.00	0.00
28	ER4a	ExonRegion	0	115.28	227.23	557.45	43.90	52.42	354.53	191.09	151.25	1799.42	474.68	92.62	183.31	408.10	265.00	111.91	104.32	78.45	146.84	59.31	6.59	157.12	386.04	183.16	325.31	100.87	89.75	87.49	19.95	153.53
29	E4_Da	NovelBoundary	0	0.00	8.82	12.51	0.00	0.00	38.06	8.07	2.54	21.50	11.06	0.00	5.48	2.90	14.45	25.71	5.89	5.18	5.27	0.00	0.00	3.17	0.00	0.00	16.27	0.00	3.78	0.00	0.00	1.29
30	E4a_E5a	KnownJunction	0	143.98	336.90	688.65	121.43	91.37	567.19	278.52	207.37	3655.00	722.02	189.46	264.30	616.95	334.90	158.86	157.89	99.24	135.37	56.65	3.64	306.60	488.80	222.90	514.83	172.87	154.19	114.16	33.79	216.04
31	I4	Intron	0	10.44	4.90	4.81	4.48	0.00	20.27	9.57	3.91	22.15	12.81	0.74	3.46	2.59	9.68	14.00	3.94	6.72	5.34	8.39	0.00	2.50	5.41	0.90	9.14	0.36	1.18	0.46	0.20	2.60
32	I4_SR1	SilentIntronRegion	0	10.49	4.92	4.83	4.50	0.00	20.37	9.62	3.93	22.26	12.88	0.75	3.48	2.60	9.73	14.07	3.96	6.75	5.36	8.42	0.00	2.51	5.43	0.91	9.19	0.36	1.18	0.46	0.20	2.61
33	E5_Aa	NovelBoundary	0	17.16	4.85	8.65	0.00	0.00	22.79	7.67	0.00	32.22	25.09	6.01	4.88	1.53	16.60	36.48	13.77	5.92	0.00	16.18	0.00	2.05	9.48	0.00	22.79	0.00	2.19	0.00	2.29	8.35
34	ER5a	ExonRegion	0	101.43	335.58	638.23	63.48	55.00	421.47	264.23	255.06	2882.26	536.27	148.68	282.06	546.45	343.81	146.63	132.68	114.84	161.68	78.99	5.68	193.71	497.56	216.06	376.44	119.23	114.38	132.69	19.23	212.84
35	E5_Da	NovelBoundary	0	2.71	0.00	12.91	0.00	0.00	13.39	2.23	17.32	74.24	28.88	0.00	6.99	11.66	13.49	0.00	6.35	1.91	0.00	8.09	0.00	3.01	24.36	2.02	8.97	0.00	0.00	0.00	0.00	1.22
36	E5a_E6a	KnownJunction	0	89.48	477.87	589.86	86.71	95.05	435.24	214.73	319.80	3663.10	514.70	158.20	326.44	624.91	396.09	127.17	93.40	127.63	148.72	80.92	15.63	200.07	502.56	189.22	445.21	136.80	124.84	160.77	16.58	248.62
37	E5a_E7a	NovelJunction	0	3.01	37.91	45.64	0.00	0.00	22.10	15.85	28.81	211.52	39.95	12.75	8.49	26.53	22.47	24.52	10.17	8.44	9.25	16.18	0.00	11.23	40.30	4.48	15.85	7.39	0.00	8.90	0.00	7.56
38	E5a_E8a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.52	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
39	E5_Db	NovelBoundary	0	3.01	12.12	2.32	0.00	0.00	9.21	7.27	2.29	21.80	5.79	3.23	1.27	5.22	7.89	27.31	0.00	2.25	0.00	0.00	0.00	1.80	6.56	0.00	3.05	0.00	0.00	0.00	0.00	0.00
40	ER5b	ExonRegion	0	1.24	1.64	1.77	0.00	0.00	2.91	0.00	6.02	12.06	10.38	0.00	1.43	2.90	3.84	0.00	2.04	0.46	0.21	1.39	0.00	0.82	5.82	0.97	2.15	0.00	0.00	0.00	0.00	0.00
41	I5	Intron	0	1.44	4.48	6.10	1.52	0.69	15.09	2.50	2.15	17.14	8.90	1.64	1.94	3.07	5.17	7.16	2.29	3.38	1.36	2.15	0.10	2.37	2.87	0.58	4.27	0.61	0.61	0.45	0.52	2.23
42	I5_AR1	ActiveIntronRegion	0	1.82	8.28	16.41	11.87	0.00	14.42	8.09	7.93	43.20	13.29	2.94	6.95	14.47	8.61	14.91	3.83	4.94	2.55	3.85	0.00	4.00	20.05	2.40	5.20	0.47	0.52	3.64	0.00	2.88
43	I5_SR1	SilentIntronRegion	0	1.40	4.04	4.87	0.28	0.78	15.20	1.83	1.46	14.04	8.38	1.49	1.35	1.71	4.77	6.25	2.10	3.20	1.22	1.95	0.11	2.18	0.82	0.36	4.16	0.63	0.62	0.07	0.58	2.15
44	E6_Aa	NovelBoundary	0	0.00	3.49	0.00	0.00	0.00	3.91	0.00	2.19	13.83	3.99	0.00	0.00	1.66	4.50	0.00	3.29	5.22	0.00	8.09	3.39	3.01	1.99	0.00	2.99	0.00	0.00	0.00	0.00	0.00
45	ER6a	ExonRegion	0	128.95	458.71	667.36	88.23	64.72	589.34	317.84	290.44	3250.85	629.94	203.36	280.86	600.66	394.56	203.60	151.76	134.70	137.68	106.46	14.84	252.93	566.98	219.32	469.80	138.62	122.85	192.60	22.23	240.30
46	E6_Da	NovelBoundary	0	5.66	9.21	6.95	0.00	6.34	29.77	8.07	4.98	20.74	10.07	0.00	2.83	1.34	10.30	26.31	7.65	8.51	13.87	0.00	0.00	8.70	0.00	0.00	14.83	0.00	0.00	4.57	0.00	4.75
47	E6a_E7a	KnownJunction	0	135.19	366.08	922.60	59.32	28.88	555.49	343.86	198.62	3055.54	613.92	165.48	205.45	542.66	341.19	176.60	151.31	113.65	113.66	137.57	2.98	183.38	513.74	176.22	415.36	105.55	96.60	115.50	18.33	211.75
48	E6a_E8a	NovelJunction	0	0.00	4.27	4.04	0.00	0.00	0.00	2.12	0.00	10.57	2.04	0.00	1.87	1.43	0.91	0.00	0.00	0.00	4.62	0.00	0.00	0.00	9.09	0.00	2.99	0.00	0.00	4.27	0.00	0.00
49	I6	Intron	0	4.49	5.62	0.00	0.00	1.71	18.24	4.22	1.29	26.25	8.07	0.42	1.73	2.26	5.22	6.75	1.73	3.13	0.67	6.70	0.00	6.99	1.89	0.00	6.76	2.00	1.10	1.28	0.00	2.11
50	I6_AR1	ActiveIntronRegion	0	3.84	6.16	0.00	0.00	0.00	17.24	6.64	1.19	26.47	9.23	0.42	0.80	1.33	4.48	5.72	2.11	4.49	0.00	1.13	0.00	6.72	0.79	0.00	12.37	1.88	1.90	0.00	0.00	3.27
51	I6_AR2	ActiveIntronRegion	0	4.87	5.43	0.00	0.00	2.62	18.98	3.03	1.36	26.35	7.60	0.41	2.24	2.75	5.67	7.37	1.57	2.48	1.03	9.58	0.00	7.18	2.49	0.00	3.99	2.08	0.69	1.97	0.00	1.54
52	E7_Aa	NovelBoundary	0	5.43	4.75	7.30	0.00	0.00	27.43	2.29	0.00	18.27	21.17	2.85	1.54	3.34	10.30	0.00	6.88	7.74	0.00	0.00	0.00	7.54	2.09	0.00	11.66	1.70	0.00	0.00	0.00	6.67
53	ER7a	ExonRegion	0	106.54	361.82	500.11	30.87	21.56	490.23	298.73	179.40	2174.68	559.39	151.10	179.93	475.65	296.06	228.86	125.15	88.60	118.98	74.66	12.53	215.11	434.23	169.78	395.78	98.68	87.78	165.02	10.40	154.04
54	E7_Da	NovelBoundary	0	2.48	33.25	48.66	21.57	22.11	74.59	37.25	18.76	273.71	87.76	6.45	21.14	57.83	33.15	54.02	13.62	26.00	18.88	16.18	0.00	48.01	65.24	32.16	49.29	12.46	16.52	12.62	0.00	24.43
55	E7a_E8a	KnownJunction	0	116.32	411.94	338.05	68.59	18.27	514.09	361.48	154.92	2940.71	572.70	122.17	159.00	496.52	257.33	381.10	104.34	99.78	153.86	105.20	6.45	248.76	513.11	153.51	339.75	90.55	84.58	102.72	14.24	146.15
56	I7	Intron	0	4.75	8.91	4.72	0.00	0.00	12.48	6.10	1.11	19.34	9.60	0.96	3.11	3.28	5.84	4.07	2.86	3.02	1.94	5.15	0.00	2.31	4.72	1.82	9.97	0.29	0.95	0.37	0.00	1.21
57	I7_AR1	ActiveIntronRegion	0	4.79	8.98	4.76	0.00	0.00	12.58	6.14	1.12	19.49	9.68	0.97	3.14	3.30	5.89	4.11	2.88	3.04	1.96	5.19	0.00	2.32	4.76	1.84	10.05	0.29	0.95	0.37	0.00	1.22
58	E8_Aa	NovelBoundary	0	5.19	21.62	4.14	0.00	7.22	14.50	5.09	0.00	11.21	11.70	0.00	3.10	0.00	2.26	8.37	3.75	5.87	13.87	0.00	0.00	0.00	0.00	0.00	19.80	0.00	0.00	0.00	0.00	0.00
59	ER8a	ExonRegion	0	51.63	152.56	306.33	46.03	19.86	169.69	135.81	67.10	889.00	208.22	38.66	59.91	211.64	113.82	122.01	42.82	35.01	53.69	36.01	8.99	79.52	348.60	60.47	213.19	40.44	34.86	47.37	7.41	62.63