Order SeqName SeqType IsAE ABC_RG012 ABC_RG016 ABC_RG015 ABC_RG046 ABC_RG047 ABC_RG048 ABC_RG049 ABC_RG058 ABC_RG059 ABC_RG061 ABC_RG073 ABC_RG074 ABC_RG086 GCB_RG003 GCB_RG005 GCB_RG006 GCB_RG007 GCB_RG010 GCB_RG014 GCB_RG045 GCB_RG050 GCB_RG055 GCB_RG062 GCB_RG063 GCB_RG064 GCB_RG071 GCB_RG072 GCB_RG069 GCB_RG085 1 CSDA Gene 0 156.45 608.01 570.52 1193.78 322.64 247.01 414.44 497.07 567.78 448.43 451.41 494.24 1164.45 141.35 160.05 104.23 120.21 310.81 621.02 369.40 156.07 399.49 418.79 465.85 165.74 90.79 327.56 58.16 258.19 2 228251 Transcript 0 128.58 248.98 614.67 1107.91 260.34 123.25 240.48 398.48 170.84 314.77 227.97 299.77 719.89 92.65 77.79 69.32 87.75 254.06 285.15 316.96 101.09 287.91 317.62 373.67 116.56 70.07 181.18 51.17 123.43 3 279550 Transcript 1 84.00 148.63 416.80 880.02 265.56 91.62 248.48 261.22 208.57 209.04 259.21 261.08 309.85 63.12 91.09 45.13 60.57 197.91 291.33 123.39 28.32 159.61 211.58 151.09 91.53 39.52 151.48 6.25 107.59 4 IG33_AR2 ActiveIntergenicRegion 0 0.00 0.00 4.49 7.31 9.96 0.00 0.00 1.10 2.25 1.16 0.00 1.24 2.60 0.91 0.00 0.00 0.00 2.73 0.00 0.28 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 IG33_SR1 SilentIntergenicRegion 0 0.00 0.00 1.88 6.20 10.12 0.00 3.14 2.78 0.87 1.02 0.00 0.10 1.22 0.39 0.00 0.00 0.00 1.19 0.00 0.00 0.49 0.00 0.00 0.84 0.00 0.00 1.20 0.00 0.00 6 IG33_AR1 ActiveIntergenicRegion 0 0.00 0.00 0.41 3.77 0.00 0.00 1.11 3.03 1.23 0.14 0.00 0.68 2.43 0.32 2.53 0.00 0.00 4.40 1.75 0.00 0.09 0.00 0.00 0.00 0.00 0.00 1.32 0.00 0.00 7 ER1a ExonRegion 0 42.73 82.66 79.49 210.18 69.87 74.13 116.27 113.22 82.66 61.03 48.32 87.92 120.52 28.43 22.67 42.58 25.29 70.65 130.78 55.14 43.99 116.82 86.00 49.72 22.84 35.56 23.97 12.16 55.09 8 E1_Da NovelBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.49 0.00 0.00 0.00 1.21 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 E1a_E2a KnownJunction 0 171.94 453.05 534.13 1034.03 279.12 264.08 313.99 427.79 379.29 380.88 565.06 477.55 1077.14 166.15 71.16 107.33 111.67 339.70 614.80 359.74 173.96 321.85 527.51 355.96 176.32 56.26 183.93 39.58 183.62 10 E1a_E4a NovelJunction 0 3.01 0.00 1.54 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.06 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.93 0.00 0.00 0.00 0.00 11 I1_SR2 SilentIntronRegion 0 4.29 0.00 2.24 0.00 0.00 0.00 2.02 0.00 0.00 0.00 0.00 1.24 0.00 0.00 0.00 0.00 0.00 0.00 4.18 2.16 1.10 0.00 0.00 0.00 1.43 0.00 0.00 0.00 0.00 12 I1_SR3 SilentIntronRegion 0 4.25 0.00 0.77 0.00 2.03 1.14 0.84 2.38 0.00 0.00 0.03 0.61 0.00 0.19 0.00 0.00 0.45 0.75 1.32 3.08 0.59 0.00 0.75 0.00 0.59 0.00 0.00 0.00 0.00 13 E2_Aa NovelBoundary 0 2.42 0.00 1.45 0.00 0.00 1.84 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.62 0.00 0.00 1.93 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14 ER2a ExonRegion 0 189.40 517.53 563.33 1217.33 325.51 321.93 479.75 574.07 486.01 468.12 564.20 717.35 1280.44 190.61 81.91 106.96 122.02 324.09 596.07 423.27 222.00 418.18 553.47 519.20 234.05 92.78 311.90 41.21 256.63 15 E2_Da NovelBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.54 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.47 0.00 0.00 0.00 2.45 0.00 0.00 0.00 0.00 0.00 16 E2a_E3a KnownJunction 0 177.25 552.81 366.87 1205.72 240.95 382.72 492.85 627.30 596.81 516.62 479.42 678.06 1080.45 183.55 149.89 125.84 113.09 415.86 695.95 521.83 277.08 450.97 491.41 619.57 246.10 93.68 280.34 38.06 262.79 17 E2a_E4a NovelJunction 0 0.00 8.92 1.20 29.12 0.00 0.00 5.38 0.00 0.00 2.04 0.00 1.39 1.46 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.51 6.10 0.00 0.00 0.00 0.00 0.00 18 I2_AR1 ActiveIntronRegion 0 0.00 2.28 0.00 0.00 0.00 0.69 2.72 0.00 0.00 0.00 1.19 1.63 0.00 0.00 0.00 0.00 0.88 0.00 4.71 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.30 0.00 0.00 19 I2_AR2 ActiveIntronRegion 0 0.00 0.00 0.00 0.00 0.00 0.81 0.21 0.00 0.00 0.00 1.15 2.39 0.00 0.00 0.00 0.00 0.41 0.00 6.09 0.29 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20 ER3a ExonRegion 0 230.99 653.21 585.56 1407.04 349.59 418.47 538.38 889.62 665.45 665.20 644.44 825.26 1413.10 242.10 147.26 142.02 186.85 509.39 668.09 651.00 274.50 571.26 634.70 804.15 330.47 114.45 368.03 36.00 309.09 21 E3_Da NovelBoundary 0 0.00 4.85 1.47 0.00 0.00 5.37 0.00 7.37 6.00 1.76 0.00 2.83 0.00 1.35 0.00 0.00 0.00 9.25 32.37 3.72 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.71 22 E3a_E4a KnownJunction 0 235.06 697.66 558.34 1628.26 470.41 387.24 562.88 904.64 658.84 724.93 647.78 737.73 1238.71 236.03 136.93 167.38 173.64 617.75 679.54 678.63 233.32 581.12 670.34 870.61 317.71 102.74 376.71 41.02 268.14 23 I3 Intron 0 3.30 4.77 3.39 16.22 4.33 4.42 2.77 2.58 3.16 3.87 3.14 3.42 0.79 1.83 1.70 1.43 1.95 5.62 13.04 3.60 2.89 0.29 1.56 4.01 0.37 0.88 1.23 0.19 0.06 24 I3_AR1 ActiveIntronRegion 0 3.65 3.88 3.43 16.82 4.30 4.88 2.96 2.59 2.68 4.11 3.14 3.45 0.65 1.46 2.00 1.22 2.10 5.90 13.02 3.88 2.93 0.32 1.64 3.72 0.38 1.11 1.29 0.14 0.08 25 I3_SR1 SilentIntronRegion 0 1.83 7.77 1.61 2.68 11.42 0.97 1.25 1.15 4.52 1.20 2.24 0.00 2.88 2.78 0.00 2.28 0.70 8.52 8.50 3.43 4.05 0.00 1.12 2.20 0.89 0.00 0.00 1.01 0.00 26 I3_AR2 ActiveIntronRegion 0 1.99 8.37 3.62 16.47 2.90 3.06 2.26 2.84 5.18 3.37 3.33 4.05 0.98 3.36 0.65 2.27 1.52 3.61 14.20 2.32 2.48 0.25 1.27 5.83 0.20 0.00 1.26 0.23 0.00 27 E4_Aa NovelBoundary 0 11.33 12.80 1.10 28.90 7.37 0.00 2.80 0.00 3.29 2.04 1.27 7.95 0.00 5.07 0.00 10.56 0.95 13.87 24.28 0.00 2.05 4.96 2.51 5.50 1.63 0.00 0.00 0.00 3.04 28 ER4a ExonRegion 0 265.22 641.32 677.83 1149.96 342.29 351.15 561.48 860.38 599.34 641.45 657.01 812.19 1587.48 268.45 120.29 165.90 194.07 519.66 695.02 632.90 213.72 531.55 639.04 740.50 295.89 116.91 365.90 49.35 267.54 29 E4a_E5a KnownJunction 0 227.74 604.00 639.81 1007.28 485.74 334.14 687.21 780.48 607.50 643.20 610.33 880.65 1928.24 244.59 160.65 169.29 195.29 463.25 686.74 489.50 222.53 509.56 702.94 576.02 210.94 99.65 296.59 71.44 308.08 30 E5_Aa NovelBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.40 0.00 0.00 0.00 0.00 0.00 0.00 3.82 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 31 ER5a ExonRegion 0 225.10 554.00 876.10 1293.27 311.65 300.14 593.83 704.01 480.80 575.09 552.67 748.92 1477.76 202.38 128.72 133.84 166.59 496.58 614.37 532.34 204.81 539.53 700.83 580.93 228.82 110.64 287.52 55.65 297.23 32 E5_Da NovelBoundary 0 11.33 4.75 11.14 69.45 7.37 3.84 13.90 4.38 7.37 11.30 4.11 5.93 1.40 0.00 0.00 10.25 5.49 27.74 0.00 0.00 2.05 0.00 4.14 2.93 0.00 4.33 0.00 1.75 0.00 33 E5a_E6a KnownJunction 0 141.45 215.81 576.11 702.72 132.78 88.32 179.88 315.07 88.13 341.61 268.74 237.44 535.27 77.06 57.20 54.08 69.13 266.49 356.07 357.84 84.51 239.29 346.72 323.18 122.14 49.87 216.88 33.02 99.80 34 E5a_E7a KnownJunction 1 84.00 148.63 416.80 880.02 265.56 91.62 248.48 261.22 208.57 209.04 259.21 261.08 309.85 63.12 91.09 45.13 60.57 197.91 291.33 123.39 28.32 159.61 211.58 151.09 91.53 39.52 151.48 6.25 107.59 35 I5 Intron 0 7.79 19.62 5.47 71.57 19.81 14.19 16.31 10.60 15.73 12.51 11.48 8.08 5.45 5.45 5.99 7.23 5.71 12.05 27.96 10.31 6.70 1.11 1.38 12.34 3.22 0.63 4.59 1.18 1.77 36 I5_AR1 ActiveIntronRegion 0 7.79 19.64 5.47 71.63 19.83 14.20 16.33 10.61 15.74 12.52 11.49 8.08 5.45 5.46 5.99 7.24 5.71 12.06 27.98 10.31 6.70 1.11 1.38 12.35 3.22 0.63 4.60 1.18 1.78 37 E6_Aa NovelBoundary 0 10.68 9.40 21.58 38.82 22.11 15.92 22.94 20.90 24.42 10.91 11.99 10.21 4.68 5.36 7.57 6.66 7.68 5.39 32.37 18.52 7.46 1.90 4.28 33.68 5.72 1.67 1.94 0.00 0.00 38 ER6a ExonRegion 0 114.00 236.88 516.63 903.45 219.24 125.66 243.42 361.95 178.04 268.56 210.84 315.87 762.94 92.29 92.04 75.60 85.24 271.69 264.71 260.01 88.01 294.13 302.41 301.71 99.99 76.74 157.90 54.33 127.68 39 E6_Da NovelBoundary 0 3.01 0.00 1.40 0.00 42.89 0.00 0.00 1.89 0.00 1.72 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.09 0.00 0.00 0.00 2.07 3.05 0.00 0.00 0.00 0.00 0.00 40 E6a_E7a KnownJunction 1 130.30 294.24 751.28 1717.56 429.00 155.77 298.15 518.41 246.36 334.14 204.33 346.02 861.45 108.59 84.11 78.26 108.88 223.98 234.68 333.03 130.76 330.31 303.72 496.11 127.56 83.60 168.77 66.14 142.82 41 E6a_E8a NovelJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 42 I6_AR3 ActiveIntronRegion 0 0.00 0.00 0.38 3.84 0.00 0.00 1.20 0.00 2.34 0.98 1.82 0.42 0.00 0.00 4.75 0.00 0.00 0.00 0.15 0.00 1.76 0.00 0.00 0.00 2.47 0.00 0.00 0.00 0.00 43 I6_SR2 SilentIntronRegion 0 0.00 0.00 0.00 9.26 0.00 0.00 3.67 0.00 1.51 0.20 2.30 0.81 0.00 0.00 0.00 0.00 0.00 0.00 7.68 1.78 1.44 0.00 1.17 0.87 0.00 0.00 0.00 0.00 0.00 44 I6_AR4 ActiveIntronRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 2.95 0.00 0.00 0.00 3.94 2.47 0.00 0.00 1.29 0.00 0.00 0.00 2.79 0.00 0.00 0.00 0.00 2.15 0.00 0.00 0.00 0.00 0.00 45 I6_AR5 ActiveIntronRegion 0 0.00 0.00 1.12 0.00 0.00 0.00 2.02 0.00 0.00 0.00 1.79 2.47 0.00 0.00 5.60 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 46 I6_AR6 ActiveIntronRegion 0 1.08 1.33 0.00 6.51 0.89 0.00 0.69 0.67 1.91 0.00 0.00 1.12 0.73 0.00 0.00 0.45 0.27 1.05 4.82 0.00 0.48 0.33 0.83 3.01 0.00 0.00 0.00 0.30 0.24 47 E7_Aa NovelBoundary 0 2.65 4.56 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.95 0.00 48 ER7a ExonRegion 0 239.06 468.54 1932.01 2388.63 825.31 248.58 634.14 886.29 635.66 650.67 544.17 844.84 1656.68 208.61 220.42 130.90 224.99 427.17 489.71 519.60 171.37 655.85 655.94 506.18 236.26 180.10 385.03 90.60 341.72 49 E7_Da NovelBoundary 0 0.00 0.00 3.06 0.00 7.37 0.00 0.00 6.72 1.16 2.04 4.81 3.19 1.97 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.04 2.51 2.99 0.00 0.00 0.00 0.00 1.78 50 E7a_E8a KnownJunction 0 262.78 434.43 2135.13 1921.60 752.92 336.64 984.61 755.60 998.96 834.82 506.75 951.19 2131.63 236.94 239.18 128.21 304.62 488.68 509.38 445.50 211.02 595.85 750.96 563.52 277.43 243.71 320.15 119.61 435.58 51 E7a_E10a NovelJunction 0 0.00 0.00 0.95 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.52 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 52 I7 Intron 0 1.46 4.94 0.50 10.95 2.69 1.81 3.59 1.95 4.69 2.14 0.86 1.20 0.96 0.58 2.61 1.23 1.01 1.80 6.91 2.69 1.15 0.46 0.61 3.19 0.79 0.07 0.08 0.14 0.57 53 I7_AR1 ActiveIntronRegion 0 1.46 4.95 0.50 10.97 2.70 1.81 3.60 1.96 4.70 2.15 0.86 1.20 0.96 0.58 2.61 1.24 1.02 1.80 6.92 2.69 1.15 0.46 0.61 3.20 0.79 0.07 0.08 0.14 0.57 54 E8_Aa NovelBoundary 0 0.00 4.36 2.69 19.84 0.00 0.00 4.92 7.46 6.73 0.00 0.00 1.17 1.97 1.09 9.97 0.00 2.48 4.62 0.00 0.00 0.00 0.00 0.00 0.00 1.93 0.00 0.00 0.00 0.00 55 ER8a ExonRegion 0 293.91 651.29 1025.80 1503.52 442.87 372.80 778.46 1065.03 921.83 763.99 643.85 954.30 2319.21 251.66 256.12 160.04 244.11 546.68 686.68 601.60 233.65 852.77 818.29 732.36 312.35 196.14 501.93 140.73 549.55 56 E8_Da NovelBoundary 0 3.01 0.00 0.00 0.00 0.00 0.00 2.35 0.00 1.83 0.00 0.00 3.34 0.00 1.13 0.00 0.00 0.00 0.00 0.00 0.00 1.60 0.00 0.00 2.99 0.00 0.00 0.00 0.00 0.00 57 E8a_E9a KnownJunction 0 468.76 910.07 1047.42 2139.45 777.38 454.00 795.69 1342.34 1192.64 984.90 821.39 1074.14 2477.43 304.14 226.83 130.35 311.55 312.73 776.43 762.32 292.81 1525.22 799.32 1406.86 411.32 280.27 573.91 160.00 542.15 58 I8_AR1 ActiveIntronRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.12 0.00 3.57 0.25 0.26 0.00 0.00 0.00 0.00 0.00 0.91 2.81 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 59 E9_Aa NovelBoundary 0 0.00 0.00 0.00 300.24 0.00 0.00 10.76 11.55 5.57 5.75 1.27 0.00 0.00 0.00 8.37 0.00 0.00 4.62 0.00 0.00 0.00 0.00 0.00 3.05 0.00 0.00 0.00 8.81 2.05 60 ER9a ExonRegion 0 285.96 887.06 1296.73 2285.35 595.79 337.11 654.15 1043.29 907.35 705.17 695.62 951.10 2228.35 254.55 232.87 135.60 240.28 424.25 858.73 492.01 203.46 832.90 680.48 746.43 291.93 157.71 494.53 112.80 500.76 61 E9_Da NovelBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 2.92 0.00 0.00 0.00 1.39 0.00 0.00 2.75 0.00 0.00 0.00 0.00 0.00 0.00 3.69 0.00 0.00 3.05 0.00 0.00 0.00 0.00 0.00 62 E9a_E10a KnownJunction 0 186.75 867.71 2524.30 3270.76 367.10 260.86 466.93 710.86 1064.31 620.00 636.52 971.37 2584.55 235.61 201.71 157.97 296.60 444.24 978.74 397.70 209.42 436.53 532.68 616.22 206.51 90.08 387.79 102.85 639.27 63 I9 Intron 0 1.15 4.70 0.28 6.22 1.01 1.42 3.25 1.06 3.33 0.72 0.98 0.72 0.67 0.37 1.14 0.89 0.49 1.33 5.28 2.28 1.06 0.07 0.37 2.58 0.41 0.19 0.45 0.07 0.19 64 I9_SR1 SilentIntronRegion 0 0.00 0.00 0.00 3.88 0.00 0.00 0.00 0.75 0.00 1.08 0.00 0.00 1.26 0.00 0.00 0.00 0.00 2.30 3.11 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 65 I9_AR2 ActiveIntronRegion 0 0.90 5.15 0.10 5.17 1.17 1.74 3.03 0.89 3.10 0.35 0.79 0.86 0.78 0.22 1.66 1.00 0.45 0.81 4.23 2.16 1.37 0.00 0.22 2.72 0.09 0.28 0.66 0.10 0.08 66 E10_Aa NovelBoundary 0 3.01 17.16 2.37 0.00 0.00 0.00 5.15 0.00 4.51 3.83 1.58 2.92 1.72 1.02 0.00 0.00 1.22 4.62 0.00 0.00 1.85 0.00 4.68 2.45 0.00 0.00 0.00 0.00 1.78 67 ER10a ExonRegion 0 153.39 1175.86 442.68 1642.40 409.02 341.68 471.67 416.16 970.66 605.13 696.09 487.45 1443.19 149.03 274.78 123.06 114.13 338.68 1128.07 467.92 210.47 365.97 422.85 659.07 185.00 75.57 564.04 64.86 325.46