Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	NRIP2	Gene	0	7.68	11.75	15.18	6.79	4.44	20.59	5.28	7.41	16.54	35.68	9.54	12.33	5.88	28.80	10.91	22.37	30.11	19.94	20.04	14.40	9.74	15.76	15.10	71.29	12.36	39.08	6.63	25.08	12.78
2	337508	Transcript	0	5.10	7.27	13.54	6.59	2.37	15.99	2.49	2.63	5.68	22.76	7.34	7.90	4.40	26.27	4.21	20.16	19.92	15.93	16.77	15.83	4.70	15.16	18.07	51.17	8.06	32.82	5.11	12.94	9.27
3	IG23	Intergenic	0	1.22	1.16	0.69	0.74	0.76	0.99	0.21	1.14	1.56	2.76	0.80	0.51	0.54	0.63	2.56	3.01	1.93	0.50	0.83	1.24	1.77	0.19	0.19	2.33	1.03	0.32	1.14	5.14	0.97
4	IG23_SR2	SilentIntergenicRegion	0	1.44	2.17	0.80	0.94	1.41	1.58	0.19	1.95	2.22	3.88	0.68	0.46	0.35	0.72	3.00	3.77	2.89	0.74	1.23	1.27	2.27	0.35	0.17	3.65	0.89	0.30	1.76	6.47	1.80
5	IG23_AR2	ActiveIntergenicRegion	0	0.00	0.00	0.57	4.11	0.00	0.00	0.00	0.00	3.17	0.58	2.19	0.11	1.73	0.53	0.00	10.39	2.43	0.00	2.86	7.15	2.65	0.00	0.67	3.32	3.56	0.00	3.02	10.12	0.00
6	IG23_SR1	SilentIntergenicRegion	0	0.88	0.00	0.67	0.00	0.00	0.03	0.50	0.00	0.90	1.96	1.18	1.01	0.86	0.34	2.29	1.20	0.00	0.48	0.00	0.71	1.54	0.00	0.26	0.85	1.69	0.39	0.07	4.37	0.00
7	ER1a	ExonRegion	0	1.44	3.32	6.59	3.67	3.90	6.58	1.34	0.98	0.89	10.49	3.76	4.27	0.84	13.49	3.30	8.12	9.53	11.76	7.29	6.21	2.69	7.75	10.32	17.52	1.44	18.26	2.44	7.72	4.55
8	E1_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.29	1.76	0.00	1.54	0.00	1.15	8.37	0.00	0.92	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.40	5.38
9	E1a_E2a	KnownJunction	0	0.00	8.63	14.15	21.57	0.00	17.61	0.00	0.00	2.95	15.14	5.66	7.98	1.53	19.56	0.00	10.79	9.48	14.00	0.00	7.28	1.76	11.96	21.97	30.21	3.37	34.59	0.00	3.95	10.20
10	I1	Intron	0	2.02	1.75	0.62	0.99	0.86	1.32	0.36	1.12	1.85	3.15	0.65	1.37	0.75	1.67	2.42	2.00	2.64	1.42	2.38	1.11	2.41	0.53	0.82	1.90	1.07	0.68	0.65	4.93	0.87
11	I1_SR1	SilentIntronRegion	0	1.46	1.48	0.58	0.83	0.94	0.88	0.23	0.92	1.35	2.44	0.28	1.74	0.33	1.13	1.32	1.43	2.54	0.75	1.11	1.27	2.00	0.21	0.56	1.08	0.47	0.55	0.21	4.42	0.65
12	I1_AR1	ActiveIntronRegion	0	3.95	0.00	0.00	0.00	0.00	1.37	0.00	0.48	4.26	0.91	0.00	1.24	0.00	2.01	0.00	2.53	0.84	0.14	0.00	0.00	2.85	0.00	0.00	0.00	1.43	0.00	0.00	3.00	0.00
13	I1_AR2	ActiveIntronRegion	0	4.43	0.00	0.00	0.00	0.00	0.27	0.00	0.00	2.25	0.00	0.00	0.33	0.00	1.45	0.00	2.19	2.00	2.73	0.00	0.00	4.28	0.00	0.00	0.00	0.86	0.00	0.00	7.61	0.00
14	I1_AR3	ActiveIntronRegion	0	3.02	1.54	0.00	0.00	0.86	0.24	0.00	0.97	1.02	1.78	0.84	0.54	1.14	1.71	0.81	0.87	1.40	1.19	1.12	0.48	1.00	0.00	1.59	1.89	1.51	0.00	0.00	5.40	0.00
15	I1_SR2	SilentIntronRegion	0	2.47	2.30	0.90	1.58	0.81	2.31	0.66	1.48	2.74	4.68	1.18	1.13	1.27	2.45	4.50	3.14	3.24	2.39	4.74	1.17	3.44	1.19	0.95	3.19	1.81	1.12	1.51	5.41	1.51
16	E2_Aa	NovelBoundary	0	7.96	3.78	9.99	0.00	0.00	10.47	8.07	13.14	24.33	17.02	0.00	7.77	4.30	21.60	8.37	31.44	37.39	13.74	48.33	9.43	12.19	4.62	4.68	19.38	13.90	12.49	0.00	66.45	6.97
17	I1_AR4	ActiveIntronRegion	0	0.18	1.23	0.56	0.00	0.00	1.37	0.00	1.46	2.39	3.13	0.00	0.93	0.38	0.60	5.60	2.32	1.75	3.64	0.00	0.00	0.24	0.00	1.81	0.00	0.00	0.00	0.00	8.90	0.00
18	ER2a	ExonRegion	0	16.95	11.06	16.86	7.55	3.81	20.61	7.31	8.59	7.12	23.28	7.55	7.57	5.90	26.04	7.98	19.10	24.67	22.99	14.91	23.05	8.49	12.15	14.18	45.74	9.05	20.49	3.05	12.99	4.91
19	E2_Da	NovelBoundary	0	4.66	8.05	4.76	10.78	0.00	8.21	5.15	8.86	22.90	13.22	0.00	4.70	8.98	16.06	25.91	13.39	38.92	4.62	0.00	0.00	5.70	0.00	0.00	3.05	1.44	1.89	3.98	23.90	4.32
20	E2a_E3a	KnownJunction	0	2.48	8.14	14.65	0.00	7.07	18.80	2.17	0.00	1.67	12.54	8.86	10.21	4.78	25.04	0.00	23.87	19.20	18.75	48.55	13.89	0.00	11.77	27.48	56.71	9.55	23.00	8.40	12.72	4.89
21	I2	Intron	0	4.54	7.18	1.69	6.21	2.35	3.44	2.04	4.34	10.01	6.74	2.06	2.94	1.47	6.75	6.74	5.98	11.86	6.09	7.38	4.23	3.98	0.69	0.96	5.39	3.03	2.19	1.94	13.03	3.35
22	I2_SR1	SilentIntronRegion	0	7.78	6.34	2.72	3.58	2.39	3.50	5.18	7.36	12.62	3.84	3.26	3.89	0.78	10.03	8.35	10.17	11.10	8.11	1.82	4.60	3.41	2.70	1.08	4.77	2.49	1.46	0.00	15.13	5.34
23	I2_AR1	ActiveIntronRegion	0	7.56	12.85	3.70	14.84	4.61	5.92	3.36	9.70	14.86	10.78	4.15	4.91	3.49	15.19	12.44	10.66	26.45	10.06	9.54	2.94	7.04	1.02	1.63	8.33	4.71	4.48	1.38	24.67	6.30
24	I2_SR2	SilentIntronRegion	0	2.88	5.08	0.75	3.21	1.46	2.46	1.05	1.78	7.73	5.60	1.06	2.02	0.77	2.94	4.26	3.51	6.23	4.24	7.38	4.70	2.87	0.27	0.67	4.33	2.45	1.41	2.46	8.15	1.89
25	E3_Aa	NovelBoundary	0	3.01	0.00	1.27	0.00	0.00	1.84	2.75	8.36	0.00	13.30	5.06	0.00	0.00	4.87	0.00	0.00	8.96	9.25	16.18	7.69	3.81	0.00	0.00	17.47	0.00	0.00	0.00	14.87	0.00
26	ER3a	ExonRegion	0	2.04	8.59	11.91	9.07	1.98	20.37	1.99	1.13	4.26	21.13	5.92	9.12	3.94	33.78	2.83	21.47	15.41	14.47	16.69	22.55	6.29	11.60	21.42	57.90	6.06	25.90	3.71	9.11	8.68
27	E3_Da	NovelBoundary	0	5.72	0.00	2.67	0.00	7.37	5.29	0.00	2.39	4.54	12.22	0.00	7.86	1.34	2.50	7.57	14.00	13.80	0.00	24.28	7.53	2.05	4.76	0.00	13.34	5.27	4.21	2.09	12.81	0.00
28	E3a_E4a	KnownJunction	0	5.84	4.85	9.24	0.00	0.00	21.22	2.92	0.00	4.14	20.65	6.74	3.22	7.32	23.09	0.00	23.64	13.78	4.62	16.18	11.08	6.14	24.31	27.43	61.43	7.16	29.10	6.41	11.28	8.29
29	I3	Intron	0	2.51	4.52	0.78	3.35	2.29	5.15	1.41	3.45	13.64	5.40	0.56	2.01	2.12	4.24	5.81	6.97	10.83	9.92	6.73	6.45	2.67	1.69	0.85	13.59	5.68	0.37	1.29	4.96	2.19
30	I3_AR1	ActiveIntronRegion	0	2.88	5.19	0.90	3.85	2.62	5.90	1.62	3.95	15.65	6.20	0.64	2.31	2.43	4.86	6.66	7.99	12.42	11.38	7.72	7.38	3.06	1.94	0.97	15.59	6.51	0.42	1.47	5.69	2.51
31	E4_Aa	NovelBoundary	0	5.72	9.70	2.69	0.00	6.34	7.29	8.64	4.38	4.42	17.18	0.00	9.79	0.00	3.26	16.94	10.71	19.13	22.99	0.00	0.00	14.20	6.90	8.57	32.00	7.16	1.93	0.00	21.48	10.07
32	ER4a	ExonRegion	0	6.87	4.98	14.24	10.43	4.08	23.62	1.29	3.83	6.29	29.49	7.81	8.63	7.99	31.78	10.47	19.69	28.57	15.77	12.72	24.40	4.89	15.97	17.89	60.21	12.81	49.17	13.93	6.53	12.21
33	E4_Da	NovelBoundary	1	8.67	0.00	4.39	0.00	0.00	5.18	0.00	9.06	20.25	12.02	5.79	3.58	3.06	5.21	15.55	24.71	16.93	18.49	16.18	7.11	2.01	4.57	0.00	22.37	7.92	0.00	0.00	21.12	9.84
34	E4a_E5a	KnownJunction	0	0.00	8.43	18.04	9.92	0.00	6.79	0.00	0.00	2.44	18.18	3.13	2.98	3.25	27.36	0.00	23.26	25.12	14.38	32.37	11.58	4.97	14.97	11.38	48.63	7.50	48.02	4.57	8.13	14.20
35	I4	Intron	0	10.14	3.31	3.09	8.85	6.03	3.68	2.49	7.19	8.64	9.81	1.47	3.94	0.80	7.07	15.49	9.69	13.51	10.04	3.28	7.05	2.05	2.22	2.97	18.14	6.17	5.49	1.51	14.41	3.44
36	I4_AR1	ActiveIntronRegion	0	10.21	3.34	3.11	8.92	6.08	3.70	2.51	7.25	8.71	9.89	1.48	3.96	0.80	7.12	15.62	9.77	13.61	10.12	3.31	7.11	2.07	2.24	3.00	18.28	6.22	5.54	1.52	14.53	3.47
37	E5_Aa	NovelBoundary	0	8.38	4.36	7.30	0.00	7.37	5.29	0.00	11.25	16.26	8.83	6.74	9.28	0.00	5.85	0.00	17.21	11.30	4.62	16.18	18.94	3.89	7.20	0.00	10.53	6.78	1.93	2.39	16.53	9.97
38	ER5a	ExonRegion	0	9.06	7.81	14.78	3.17	0.38	10.84	1.94	2.64	7.95	26.91	8.06	8.03	3.01	31.76	8.67	21.11	22.11	18.13	11.96	23.12	1.37	20.00	20.50	52.97	8.71	37.84	3.73	19.81	10.66
39	E5_Da	NovelBoundary	0	6.02	3.97	0.00	10.78	0.00	3.53	5.49	12.54	12.85	10.63	0.00	3.07	0.00	13.54	0.00	16.45	16.43	9.25	0.00	4.13	2.05	2.29	4.53	45.28	5.15	2.10	5.07	18.38	1.68
40	E5a_E6a	KnownJunction	0	3.01	0.00	11.54	0.00	0.00	6.02	2.12	2.54	3.08	29.72	12.12	10.09	2.99	25.48	0.00	25.09	15.76	18.49	0.00	16.79	3.25	18.57	10.69	46.00	7.92	30.08	2.48	18.74	8.09
41	I5	Intron	0	7.74	3.90	4.72	3.38	6.13	6.26	4.43	6.93	13.08	13.14	4.67	4.06	1.02	7.81	2.31	9.80	11.48	11.64	11.03	5.26	2.46	3.39	3.41	16.20	6.28	5.18	1.15	16.11	2.00
42	I5_AR1	ActiveIntronRegion	0	7.78	3.93	4.75	3.40	6.17	6.29	4.46	6.98	13.16	13.22	4.70	4.09	1.02	7.86	2.32	9.86	11.54	11.71	11.10	5.28	2.47	3.42	3.43	16.30	6.32	5.21	1.16	16.21	2.01
43	E6_Aa	NovelBoundary	0	5.31	0.00	6.68	25.24	0.00	3.15	0.00	10.05	19.79	4.67	0.00	8.64	0.00	15.64	16.54	13.23	11.61	18.49	0.00	0.00	1.60	6.47	2.41	8.13	5.04	4.03	7.31	20.44	1.35
44	ER6a	ExonRegion	0	8.42	14.12	16.94	7.11	4.83	23.41	6.37	9.20	21.74	42.84	11.13	14.77	6.89	31.53	13.06	25.65	35.51	21.85	23.76	14.12	11.90	17.66	15.52	85.58	15.10	44.58	7.48	31.40	15.27
45	IG22	Intergenic	0	8.02	2.98	3.41	2.44	3.32	5.14	2.06	8.14	7.25	11.29	3.65	2.09	0.88	8.16	20.98	13.02	12.69	11.14	9.78	6.56	4.85	3.06	2.46	33.64	7.78	7.49	8.10	8.31	6.14
46	IG22_AR1	ActiveIntergenicRegion	0	8.06	3.00	3.43	2.45	3.34	5.18	2.07	8.18	7.28	11.37	3.67	2.11	0.89	8.21	21.12	13.11	12.77	11.21	9.84	6.60	4.88	3.09	2.48	33.87	7.83	7.54	8.15	8.37	6.18