Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	AP002004.1	Gene	0	16.78	22.77	8.11	85.51	7.33	28.39	46.63	7.18	26.92	58.00	5.19	8.08	7.25	9.63	49.54	28.87	128.50	7.74	7.10	5.82	20.76	52.32	5.22	32.62	10.28	8.90	3.33	17.28	8.86
2	412702	Transcript	0	45.18	41.06	23.77	379.66	31.68	70.53	163.06	16.33	76.61	117.42	11.44	19.40	20.58	14.65	123.16	64.07	191.69	17.40	12.49	18.11	40.64	160.57	15.23	68.01	27.82	26.50	8.61	53.25	25.13
3	IG42_AR2	ActiveIntergenicRegion	0	0.00	0.00	0.00	15.34	1.74	0.00	0.00	0.00	0.00	0.51	1.27	0.00	0.00	0.00	0.00	0.00	8.05	6.18	0.00	0.00	3.73	1.29	2.58	0.00	0.00	0.56	0.00	8.14	4.62
4	ER1a	ExonRegion	0	30.20	51.77	29.88	670.54	63.68	121.48	312.62	18.25	80.84	149.43	15.68	34.71	30.84	11.93	180.56	127.36	253.37	30.61	34.83	18.02	67.94	152.17	23.39	49.10	13.27	51.90	5.49	79.23	34.98
5	E1_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.97	0.00	0.00	0.00	3.77	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
6	E1a_E2a	KnownJunction	0	82.34	118.96	78.28	1576.93	129.10	296.47	763.19	33.09	206.07	403.81	35.05	70.24	65.89	26.19	336.65	276.16	583.71	62.29	32.37	53.09	168.78	351.75	52.35	119.27	30.19	137.15	29.67	224.12	80.92
7	E1a_E4a	NovelJunction	1	5.66	36.16	2.52	0.00	6.04	13.54	30.61	0.00	22.50	20.53	2.97	3.67	3.50	0.00	0.00	10.40	22.73	4.62	0.00	0.00	3.73	31.02	0.00	3.05	1.93	2.19	7.16	2.20	0.00
8	ER2a	ExonRegion	0	36.57	41.42	21.49	257.71	21.82	85.90	130.34	24.31	62.65	100.03	8.41	19.54	21.62	12.60	105.93	62.08	186.50	16.27	18.83	15.78	53.08	159.94	10.25	60.86	21.19	31.85	8.21	48.81	23.09
9	E2_Da	NovelBoundary	0	5.66	4.85	3.09	0.00	0.00	58.20	5.72	0.00	11.69	49.81	7.97	3.04	0.00	4.45	0.00	71.99	110.52	13.87	0.00	0.00	13.04	2.43	0.00	6.04	1.86	16.56	0.00	4.54	1.58
10	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	5.15	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
11	E2a_E4a	NovelJunction	1	20.47	87.16	1.45	50.47	0.00	175.88	612.88	14.43	197.33	287.05	7.12	37.47	28.12	12.87	348.01	133.26	286.99	47.90	32.37	27.62	110.91	126.55	35.71	50.66	29.10	54.33	9.00	86.54	50.38
12	I2	Intron	0	2.60	6.77	2.25	4.04	0.42	7.15	2.71	0.48	7.27	18.03	1.08	1.47	1.35	3.63	5.54	14.49	61.63	4.07	2.49	1.55	9.96	2.50	0.31	6.25	1.36	2.59	0.00	0.92	2.35
13	I2_AR1	ActiveIntronRegion	0	2.16	3.68	1.04	2.77	0.82	8.02	0.52	0.00	3.79	12.29	1.16	1.14	0.65	1.15	3.24	7.97	43.18	1.94	4.29	0.00	5.93	0.00	0.00	4.63	1.92	1.58	0.00	0.55	1.01
14	I2_SR1	SilentIntronRegion	0	2.76	7.86	2.67	4.50	0.29	6.87	3.48	0.65	8.50	20.09	1.06	1.59	1.59	4.50	6.36	16.80	68.22	4.82	1.87	2.10	11.39	3.38	0.42	6.83	1.17	2.95	0.00	1.05	2.82
15	E3_Aa	NovelBoundary	0	6.02	22.49	2.54	31.06	0.00	10.67	0.00	0.00	8.89	22.33	1.61	4.31	1.40	2.22	7.97	6.58	69.44	4.62	8.09	0.00	11.67	0.00	0.00	0.00	0.00	3.39	0.00	0.00	3.43
16	ER3a	ExonRegion	0	2.66	9.50	1.91	6.57	0.00	11.88	8.58	0.62	6.28	29.03	2.54	2.46	0.85	6.23	12.85	16.22	99.29	4.02	2.93	0.82	13.25	2.14	0.88	14.56	2.40	2.61	0.00	1.64	2.16
17	E3_Da	NovelBoundary	0	2.77	4.85	2.84	0.00	0.00	10.36	5.03	0.00	22.78	40.58	0.00	4.97	0.00	4.56	16.74	17.59	67.21	4.62	0.00	0.00	10.87	0.00	0.00	22.43	5.76	0.00	0.00	0.00	1.39
18	E3a_E4a	KnownJunction	0	5.43	0.00	1.15	0.00	0.00	0.00	11.33	2.34	0.00	5.71	3.20	0.00	0.00	3.50	15.95	7.65	75.77	0.00	0.00	0.00	11.07	2.29	0.00	0.00	1.93	0.00	0.00	2.11	0.00
19	I3	Intron	0	0.58	4.37	0.23	8.75	0.66	13.79	1.91	0.00	5.25	14.10	0.65	0.50	0.00	1.54	7.36	8.90	30.18	3.70	4.33	0.75	5.22	0.98	0.00	15.46	1.16	1.49	0.00	0.66	0.54
20	I3_AR1	ActiveIntronRegion	0	1.44	6.48	0.00	9.62	0.00	5.50	0.00	0.00	3.39	2.91	0.00	0.00	0.00	0.61	3.10	4.99	5.01	3.88	10.72	1.85	2.87	0.00	0.00	7.22	0.00	0.00	0.00	0.00	0.00
21	I3_AR2	ActiveIntronRegion	0	0.42	4.37	0.32	9.73	0.95	18.12	2.74	0.00	6.52	19.32	0.92	0.72	0.00	2.02	9.63	11.28	41.70	3.80	3.10	0.53	6.64	1.40	0.00	20.02	1.66	2.13	0.00	0.95	0.78
22	E4_Aa	NovelBoundary	0	2.24	0.00	1.27	0.00	0.00	15.08	0.00	0.00	6.91	29.48	2.91	0.00	0.00	1.13	8.37	10.56	57.02	4.62	0.00	4.13	2.05	6.86	0.00	28.41	0.00	2.19	0.00	0.00	0.00
23	ER4a	ExonRegion	0	44.41	46.14	17.92	39.36	6.02	41.83	154.39	20.77	74.27	163.09	18.22	23.25	26.97	19.83	164.15	42.13	250.34	14.14	12.92	11.78	25.07	133.42	23.66	68.17	39.42	20.69	26.31	85.24	28.37
24	E4_Da	NovelBoundary	0	6.02	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.99	0.00	0.00	0.00	0.93	0.00	0.00	15.96	0.00	0.00	0.00	0.00	0.00	2.36	0.00	0.00	0.00	0.00	0.00	1.98
25	E4a_E5a	KnownJunction	0	118.03	54.20	54.31	91.24	7.37	83.68	101.44	29.11	187.95	149.32	23.28	19.25	29.62	31.88	161.25	61.50	230.20	13.87	0.00	39.03	43.72	401.92	8.37	190.27	77.06	14.81	12.03	44.21	38.10
26	I4	Intron	0	0.63	2.85	0.31	4.76	0.36	2.69	0.22	0.00	2.36	2.77	0.61	0.43	0.00	1.24	0.88	3.30	13.38	1.00	1.77	0.31	2.16	0.67	0.00	4.37	0.42	0.75	0.00	0.66	0.32
27	I4_SR1	SilentIntronRegion	0	0.63	2.95	0.35	5.09	0.41	2.61	0.20	0.00	2.25	2.48	0.70	0.41	0.00	1.15	0.81	3.31	13.30	1.05	1.87	0.35	1.81	0.53	0.00	3.80	0.42	0.52	0.00	0.62	0.28
28	I4_AR1	ActiveIntronRegion	0	0.69	2.14	0.00	2.31	0.00	3.32	0.38	0.00	3.21	5.04	0.00	0.62	0.00	1.92	1.49	3.20	14.23	0.62	1.03	0.00	4.90	1.75	0.00	8.81	0.46	2.54	0.00	1.00	0.65
29	E5_Aa	NovelBoundary	0	0.00	3.68	0.00	0.00	0.00	0.00	0.00	0.00	8.10	6.03	0.00	1.54	0.00	0.86	0.00	0.00	21.50	0.00	0.00	0.00	6.90	9.24	0.00	13.04	1.40	0.00	0.00	0.00	2.05
30	ER5a	ExonRegion	0	75.51	76.14	26.48	307.90	29.05	59.39	93.40	23.73	91.21	135.37	10.45	20.93	17.47	24.02	130.55	55.08	204.96	16.07	14.00	22.63	32.66	222.25	12.40	110.43	34.32	12.65	6.12	33.45	22.37
31	E5_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	1.96	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	7.27	0.00	0.00	0.00	0.00	0.00	0.00	5.68	0.00	0.00	0.00	0.00	0.00
32	E5a_E6a	KnownJunction	0	85.65	32.87	23.05	1096.36	83.12	60.66	182.69	20.11	107.74	113.57	6.01	18.64	25.13	16.20	184.17	39.01	165.83	28.51	16.18	30.35	23.95	296.86	29.21	112.27	75.09	15.92	3.88	50.91	39.09
33	ER6a	ExonRegion	0	16.20	20.67	6.98	129.63	8.37	14.56	30.52	7.31	25.67	42.22	3.03	4.41	8.03	8.74	62.66	17.62	58.67	5.61	5.29	7.69	7.48	43.54	6.98	23.18	11.19	3.93	3.06	16.02	7.37