Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	C11orf54	Gene	0	151.20	139.63	74.26	208.63	355.61	190.34	191.89	103.61	73.04	121.28	121.78	122.36	102.05	136.00	193.11	127.38	95.13	122.90	125.59	368.00	107.86	123.26	95.07	111.99	110.22	83.95	92.12	74.26	114.14
2	331239	Transcript	0	47.55	47.52	23.57	62.68	138.88	58.60	67.20	38.48	36.25	42.60	30.73	50.76	38.43	42.72	106.74	44.39	30.56	45.45	41.56	115.65	33.32	48.56	33.35	38.41	33.43	26.79	29.24	25.91	39.26
3	354421	Transcript	0	260.27	178.46	119.68	255.30	465.50	230.91	225.73	154.41	69.75	185.68	188.74	168.78	141.89	210.18	157.32	138.98	152.94	142.95	140.98	472.63	123.61	210.95	136.05	174.29	184.75	141.88	134.74	136.51	176.83
4	IG24_SR1	SilentIntergenicRegion	0	5.36	0.00	0.00	0.00	10.59	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.14	0.00	0.00	0.00	0.00	2.00	1.13	0.85	1.10	0.00	3.23	0.00	0.00	0.00	0.00	0.61	0.00
5	IG24_AR2	ActiveIntergenicRegion	0	4.29	0.00	0.00	0.00	12.45	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.58	3.11	2.81	0.36	0.00	1.81	0.00	0.00	0.00	0.00	1.53	0.00
6	ER1a	ExonRegion	0	27.02	5.81	28.65	36.73	151.53	17.87	16.69	24.19	8.60	24.54	14.06	32.94	10.66	18.52	16.28	16.48	9.55	32.75	19.58	56.93	11.21	31.40	22.71	11.56	19.78	22.00	17.38	20.55	23.16
7	E1_Ab	KnownBoundary	0	47.13	12.31	74.20	92.53	230.78	34.99	35.07	45.09	16.32	40.27	22.81	76.90	29.01	40.86	8.17	32.74	38.47	14.51	8.09	69.38	18.97	57.17	49.00	20.94	22.47	52.27	23.81	44.66	46.02
8	ER1b	ExonRegion	0	168.24	85.57	127.04	644.63	864.17	229.66	185.62	164.48	45.59	112.30	149.67	115.99	98.64	139.07	54.49	169.90	56.98	167.68	100.95	351.24	150.06	165.06	156.64	55.78	137.29	243.28	118.24	165.44	135.79
9	E1_Da	NovelBoundary	0	30.55	4.36	11.16	18.98	21.52	9.40	2.12	4.93	3.84	12.66	1.61	2.86	6.24	11.59	0.00	3.75	31.29	14.64	0.00	11.66	25.51	0.00	0.00	11.42	8.90	10.26	0.00	6.56	2.91
10	E1a_E2a	KnownJunction	0	180.20	98.21	217.56	440.44	620.73	274.87	235.32	100.13	72.17	124.87	140.58	131.14	125.69	156.29	69.76	139.23	135.03	125.60	64.74	379.26	170.11	162.33	167.60	102.52	140.29	213.80	127.23	120.64	157.90
11	E1a_E3a	NovelJunction	0	19.88	4.85	13.93	48.96	22.11	6.75	15.39	10.15	0.00	3.91	6.33	8.04	15.41	1.82	7.77	7.65	2.27	4.62	8.09	24.81	9.95	4.28	6.60	2.87	5.23	11.11	9.44	11.14	8.52
12	E1a_E8a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	3.95	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.32	0.00
13	I1	Intron	0	14.98	5.67	3.30	9.99	6.64	9.27	4.73	5.23	7.63	8.03	3.55	5.91	2.56	6.15	9.19	9.86	18.83	14.68	6.31	16.07	10.39	0.57	1.18	3.30	3.56	3.08	1.97	6.79	3.57
14	I1_AR1	ActiveIntronRegion	0	17.47	2.19	3.22	5.25	8.05	7.30	4.98	4.21	5.18	9.12	2.40	4.68	2.61	5.92	4.46	8.41	19.14	15.02	2.34	12.67	7.70	0.83	1.82	3.15	3.80	4.03	2.52	11.05	3.37
15	I1_AR3	ActiveIntronRegion	0	8.51	4.94	2.95	3.16	10.05	4.44	5.63	2.44	2.39	4.88	1.57	2.08	1.71	7.11	5.55	6.88	5.48	12.60	3.29	10.71	6.50	0.00	2.66	3.16	2.31	0.46	1.88	4.07	1.18
16	I1_SR3	SilentIntronRegion	0	58.26	8.30	4.81	8.20	7.75	15.40	11.57	32.06	17.37	13.87	7.95	14.41	4.62	11.70	5.49	17.97	41.95	32.34	10.38	33.90	14.41	3.71	3.69	7.21	16.72	16.13	1.50	18.08	5.37
17	I1_AR4	ActiveIntronRegion	0	23.94	12.67	7.77	28.00	8.61	11.80	6.55	9.51	14.40	13.59	6.14	12.98	5.13	7.95	13.10	12.59	34.50	19.97	12.27	25.22	19.06	0.55	1.54	4.55	5.35	5.21	4.28	10.59	8.04
18	I1_AR5	ActiveIntronRegion	0	11.15	4.73	0.88	6.02	4.61	9.63	2.33	3.67	8.34	5.91	4.00	2.58	1.19	5.43	15.04	9.72	13.82	12.52	7.19	12.95	8.16	0.38	0.00	4.11	2.25	2.14	0.77	4.92	2.39
19	I1_AR6	ActiveIntronRegion	0	5.38	2.95	1.05	3.93	3.44	10.82	3.46	1.01	4.56	4.81	2.42	3.75	1.37	4.44	8.57	10.05	12.39	10.66	4.61	13.64	8.27	0.41	0.14	1.46	1.57	0.61	0.43	1.27	1.55
20	E2_Aa	NovelBoundary	0	17.22	9.02	3.64	10.57	0.00	1.69	4.86	0.00	4.26	16.26	6.33	2.89	0.00	4.59	8.17	14.31	16.03	23.89	16.18	37.96	7.94	4.76	0.00	0.00	1.63	0.00	0.00	4.27	6.83
21	ER2a	ExonRegion	0	190.74	75.21	73.01	140.86	226.40	195.19	140.77	133.13	53.27	104.74	112.93	103.13	90.86	134.76	57.30	120.38	80.70	123.41	69.94	365.20	107.90	173.24	84.69	86.07	119.03	116.45	70.10	63.84	102.38
22	E2_Da	NovelBoundary	0	8.67	9.70	0.00	0.00	0.00	7.06	2.35	0.00	6.58	7.39	8.73	3.46	0.00	3.12	0.00	11.09	7.16	4.62	0.00	11.25	1.68	0.00	0.00	3.05	10.57	0.00	4.47	2.29	3.47
23	E2a_E3a	KnownJunction	0	277.47	149.69	46.77	153.14	139.86	470.50	324.12	196.28	96.14	204.52	187.91	154.45	154.13	217.73	122.98	305.69	116.80	314.78	194.22	687.23	277.68	226.02	166.71	191.35	234.40	221.18	103.77	131.02	211.29
24	E2a_E4a	NovelJunction	0	4.84	4.36	1.30	0.00	0.00	8.56	2.35	2.54	0.00	3.99	0.00	5.63	3.76	2.46	0.00	0.00	0.95	10.02	0.00	8.10	3.85	2.04	0.00	0.00	3.49	7.68	0.00	8.49	2.97
25	I2	Intron	0	1.39	3.28	0.70	2.73	1.86	4.97	2.99	1.19	5.16	3.52	2.31	2.23	1.06	2.19	7.31	6.22	6.71	5.71	4.99	5.99	5.05	0.14	0.34	3.44	1.14	0.24	0.14	1.74	1.93
26	I2_AR1	ActiveIntronRegion	0	0.83	3.51	0.65	2.79	7.61	3.83	3.14	0.72	1.59	3.16	5.10	0.67	0.00	1.67	0.68	5.31	2.67	5.98	8.40	6.76	3.48	0.00	0.00	0.00	2.31	0.61	0.71	0.00	2.12
27	I2_SR1	SilentIntronRegion	0	0.61	6.77	0.47	2.03	0.00	2.25	1.83	0.52	2.50	3.92	0.87	1.37	0.37	2.09	4.70	2.24	3.66	1.64	3.85	5.62	3.08	0.00	0.00	2.44	0.34	0.00	0.00	0.67	3.24
28	I2_AR2	ActiveIntronRegion	0	1.47	5.43	0.43	1.24	3.37	7.13	5.18	0.32	6.89	4.91	1.52	3.41	0.56	3.06	13.91	10.15	6.03	9.85	6.91	7.94	7.59	0.00	0.44	5.68	1.48	0.00	0.00	1.28	0.52
29	I2_SR2	SilentIntronRegion	0	1.56	0.58	1.06	3.89	0.88	3.47	1.78	1.66	2.81	3.14	0.65	1.48	0.00	1.30	7.01	2.58	4.40	4.18	1.41	6.95	4.70	0.65	1.17	4.16	1.03	0.85	0.33	3.54	2.66
30	I2_AR3	ActiveIntronRegion	0	1.70	2.09	0.76	3.26	0.55	5.93	2.74	1.88	7.64	2.79	3.64	2.74	2.65	2.37	6.16	7.81	11.02	5.51	5.44	4.07	4.86	0.00	0.00	2.93	0.97	0.00	0.00	1.85	1.82
31	E3_Aa	NovelBoundary	0	8.91	0.00	1.30	31.49	0.00	7.14	4.81	0.00	10.38	5.39	1.61	0.00	0.00	5.05	0.00	11.40	11.88	9.25	0.00	18.69	10.35	0.00	0.00	5.38	0.00	0.00	0.00	0.00	5.45
32	ER3a	ExonRegion	0	171.30	114.97	88.86	153.86	323.50	243.25	281.13	101.56	53.83	199.27	239.84	177.56	127.04	167.16	90.68	165.83	135.17	162.84	126.59	426.31	132.38	109.46	193.17	125.44	156.39	211.95	179.82	186.22	189.22
33	E3_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	3.76	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.13	0.00	0.00	2.18	0.00	0.00	0.00	3.81	0.00	0.00	0.00	0.00	0.00	5.07	0.00	0.00
34	E3a_E4a	KnownJunction	0	166.87	102.38	166.56	173.85	675.55	158.53	146.18	102.97	33.10	153.55	150.42	84.46	81.14	119.29	89.89	114.90	112.84	131.13	137.57	341.22	90.13	115.08	84.22	117.66	96.19	52.27	143.38	75.40	111.75
35	E4_Aa	NovelBoundary	0	2.65	0.00	3.11	0.00	0.00	0.00	0.00	0.00	1.28	0.00	0.00	1.33	1.40	2.06	0.00	11.32	5.49	14.64	8.09	0.00	0.00	1.85	0.00	5.38	1.93	0.00	0.00	0.00	1.22
36	ER4a	ExonRegion	0	239.06	99.52	231.06	350.41	712.63	205.87	195.72	144.77	44.09	161.33	158.85	103.25	98.81	156.64	98.31	176.26	101.09	147.45	92.66	444.24	113.24	154.06	105.25	125.87	138.39	87.74	78.38	87.76	100.70
37	E4_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	17.74	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	5.02	0.00	0.00	0.00	0.00	0.00
38	E4a_E5a	KnownJunction	0	278.82	170.83	217.91	615.37	981.05	268.57	209.86	123.12	45.77	153.35	161.53	97.56	141.61	168.26	141.32	211.14	82.38	129.97	89.02	473.95	138.90	139.29	139.28	188.60	142.41	93.21	93.08	80.38	111.75
39	E5_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.23	1.33	0.00	0.00	0.00	0.00	2.41	0.00	0.00	0.00	1.52	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
40	ER5a	ExonRegion	0	261.80	143.18	164.00	490.52	744.40	286.43	254.95	154.89	41.54	211.14	214.42	142.36	118.36	214.33	134.58	173.11	112.71	147.16	111.86	535.85	147.24	182.77	164.36	146.97	176.90	133.10	114.69	111.88	145.88
41	E5_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	4.91	0.00	0.00	4.75	3.28	0.00	1.81	0.00	0.86	0.00	0.00	1.40	0.00	0.00	4.13	0.00	0.00	0.00	2.39	0.00	2.19	0.00	0.00	0.00
42	E5a_E6a	KnownJunction	0	273.87	79.69	119.57	389.32	484.85	287.53	238.30	150.04	54.33	281.58	194.14	128.97	113.46	191.59	167.83	248.09	135.69	155.27	104.98	475.60	142.99	159.22	143.42	123.88	174.61	136.90	87.91	157.98	208.84
43	E5a_E7a	NovelJunction	0	11.33	4.17	6.63	10.14	35.52	3.41	5.44	14.03	0.00	3.83	5.92	2.83	10.06	9.64	16.94	10.25	12.06	4.62	8.09	32.91	11.59	10.70	10.64	5.74	13.22	0.00	24.60	1.75	5.94
44	I5_AR1	ActiveIntronRegion	0	0.00	0.95	0.49	0.00	0.00	0.41	0.00	0.00	0.49	0.00	0.70	0.00	0.00	0.00	3.24	0.00	1.32	0.66	1.88	0.00	0.84	1.06	1.07	0.00	0.00	0.00	2.70	1.92	0.00
45	E6_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	3.76	0.00	0.00	1.13	0.00	0.00	1.42	0.00	2.28	7.97	0.00	1.01	0.00	0.00	3.06	0.00	2.14	0.00	0.00	0.00	2.06	0.00	0.00	0.00
46	ER6a	ExonRegion	0	263.19	130.90	120.27	227.11	345.30	275.64	249.70	176.09	52.53	204.36	220.84	164.30	140.96	228.16	120.62	176.36	145.29	151.29	130.00	477.19	144.83	204.38	147.64	156.27	187.47	137.48	109.24	133.40	165.75
47	E6_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	3.49	4.98	0.00	0.00	1.52	0.00	1.17	0.00	0.00	0.00	3.67	2.34	0.00	0.00	0.00	0.00	0.00	2.02	0.00	0.00	0.00	0.00	0.00	3.53
48	E6a_E7a	KnownJunction	0	302.83	148.53	168.97	224.54	379.63	226.64	216.39	187.32	75.86	193.54	142.64	162.47	147.89	220.41	170.02	165.08	154.59	115.59	105.20	485.86	119.69	257.48	102.69	185.67	179.50	139.60	105.71	119.43	200.66
49	E6a_E8a	KnownJunction	0	18.93	8.34	4.76	21.57	48.93	18.45	24.32	6.52	4.66	11.70	5.92	10.93	8.95	10.97	8.17	17.37	6.89	13.87	8.09	10.59	7.30	23.92	11.77	5.68	15.53	12.70	0.00	12.22	1.65
50	E7_Aa	NovelBoundary	0	2.71	3.88	0.00	0.00	0.00	0.00	0.00	0.00	11.88	0.00	1.33	0.00	0.00	0.00	0.00	0.00	10.76	4.62	0.00	0.00	0.00	0.00	0.00	2.51	0.00	0.00	0.00	0.00	0.00
51	ER7a	ExonRegion	0	225.77	171.63	114.23	268.08	450.83	238.11	223.83	133.67	55.04	176.40	209.71	179.96	143.11	202.29	142.48	152.79	142.58	170.59	147.78	491.34	130.96	163.80	134.70	160.03	181.31	128.72	119.84	127.05	159.62
52	E7_Da	NovelBoundary	0	8.32	4.07	0.00	8.41	0.00	1.46	0.00	0.00	22.50	5.51	2.85	8.13	0.00	1.11	0.00	3.67	13.01	9.25	0.00	0.00	2.05	0.00	0.00	0.00	1.93	0.00	0.00	4.04	2.51
53	E7a_E8a	KnownJunction	0	252.22	215.23	75.84	273.28	566.05	227.98	236.98	142.23	78.35	187.11	213.88	163.91	134.67	207.83	159.46	99.07	161.66	142.69	169.94	440.70	120.17	211.58	170.75	177.17	193.44	157.32	178.66	163.06	170.22
54	I7	Intron	0	2.21	0.00	0.28	6.16	1.68	0.71	1.04	0.32	3.37	1.24	0.00	0.64	0.00	0.39	2.53	1.58	1.03	1.65	1.65	0.95	1.22	0.62	0.00	1.11	0.25	0.27	0.00	0.84	0.00
55	I7_SR1	SilentIntronRegion	0	2.22	0.00	0.29	6.20	1.69	0.71	1.05	0.32	3.39	1.25	0.00	0.64	0.00	0.39	2.54	1.60	1.03	1.67	1.66	0.95	1.23	0.62	0.00	1.12	0.25	0.27	0.00	0.85	0.00
56	E8_Aa	NovelBoundary	0	2.48	4.85	0.00	9.27	0.00	1.46	0.00	0.00	11.57	5.59	0.00	3.89	0.00	0.93	9.77	13.69	5.76	0.00	0.00	0.00	2.05	0.00	0.00	13.28	1.63	0.00	0.00	0.00	1.68
57	ER8a	ExonRegion	0	242.93	231.32	108.54	235.51	479.97	246.50	242.10	105.78	66.26	159.88	203.95	174.02	166.75	211.18	166.06	176.87	142.11	188.48	207.72	463.28	135.03	188.84	134.91	180.00	198.31	108.99	168.31	108.32	157.95
58	E8_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	5.49	0.00	0.00	0.00	2.04	0.00	1.87	0.00	0.97	0.00	3.14	2.68	0.00	0.00	4.13	4.93	0.00	0.00	0.00	0.00	8.63	0.00	1.84	0.00
59	E8a_E9a	KnownJunction	0	220.31	222.21	135.19	214.40	349.57	196.48	197.79	137.25	79.51	156.47	113.69	174.45	124.61	192.83	196.33	116.74	105.30	176.08	153.76	543.17	119.65	220.92	70.13	190.81	170.98	104.15	108.79	72.79	126.31
60	E9_Aa	NovelBoundary	0	0.00	0.00	1.17	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.61	6.05	0.00	1.22	0.00	3.52	4.70	0.00	8.09	3.72	4.09	0.00	0.00	2.93	1.89	0.00	0.00	0.00	0.00
61	ER9a	ExonRegion	0	123.60	163.51	57.52	213.17	376.01	188.35	196.16	83.11	78.88	98.87	93.55	108.95	84.17	118.00	198.56	120.30	89.60	121.06	159.90	375.00	110.39	102.63	77.31	103.44	94.19	58.89	86.51	51.88	101.09
62	E9_Da	KnownBoundary	1	89.83	202.43	29.80	216.12	341.90	257.18	282.64	62.56	118.46	93.47	60.14	107.77	60.12	86.81	376.32	151.09	76.37	120.98	226.59	397.45	116.04	43.22	41.96	91.28	51.90	24.12	36.48	23.09	78.84
63	ER9b	ExonRegion	0	96.70	128.43	37.30	129.73	216.20	139.46	160.60	84.74	95.51	91.55	72.21	108.42	95.67	98.67	295.75	99.33	75.23	89.72	97.01	279.43	81.45	90.35	65.56	98.00	64.98	45.67	70.35	44.96	92.97
64	IG25_AR1	ActiveIntergenicRegion	0	1.84	4.85	1.12	3.48	1.90	5.30	0.00	0.88	1.71	1.79	4.42	1.12	0.00	2.59	0.00	3.25	3.91	8.19	12.50	6.16	1.90	1.03	4.56	7.79	5.24	0.00	9.77	0.54	1.02
65	IG25_SR1	SilentIntergenicRegion	0	1.18	9.25	1.03	10.97	7.64	5.16	0.00	1.26	3.22	1.83	3.51	0.66	0.00	3.73	0.00	9.41	3.71	10.83	14.63	6.56	9.03	1.17	7.62	10.07	6.67	2.67	9.04	1.20	2.48
66	IG25_SR3	SilentIntergenicRegion	0	1.61	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.10	1.42	0.00	1.14	0.00	0.00	0.00	0.58	0.83	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.21	1.54	0.00	0.00	0.00
67	IG25_AR4	ActiveIntergenicRegion	0	2.14	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.91	0.00	0.00	0.00	0.00