Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	KBTBD3	Gene	0	27.46	11.43	10.88	50.20	33.01	18.34	53.20	28.91	9.71	9.08	9.71	8.61	11.76	9.73	55.78	19.24	19.43	7.44	60.87	43.49	24.65	6.65	5.75	12.42	12.63	8.90	14.99	4.40	11.12
2	402992	Transcript	0	103.17	12.18	45.35	357.91	230.96	25.54	130.27	218.82	22.14	13.10	15.11	14.23	35.16	14.72	90.16	40.47	30.12	24.92	137.57	75.40	33.15	26.36	20.97	19.68	35.59	52.04	21.85	24.63	17.89
3	332166	Transcript	0	25.72	6.57	23.28	179.16	73.48	12.03	61.98	89.21	12.64	2.53	2.38	9.28	21.11	5.22	42.00	21.51	20.28	15.01	80.33	33.03	13.55	9.92	9.49	5.92	6.79	14.14	4.12	9.37	9.06
4	393121	Transcript	0	136.55	31.41	42.41	194.12	300.79	120.93	274.57	100.43	31.12	33.63	41.41	25.87	36.84	26.68	441.49	192.32	67.80	51.50	582.66	160.02	100.36	9.09	52.60	11.48	65.73	61.88	97.85	15.37	63.22
5	ER1a	ExonRegion	0	0.00	0.00	0.30	1.31	1.57	0.00	0.37	0.34	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.00	0.26	0.66	0.66	0.78	0.00	0.00	0.21	0.30	0.00
6	E1_Ab	KnownBoundary	0	0.00	0.00	0.00	0.00	20.48	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.53	0.00	0.00
7	ER1b	ExonRegion	0	33.92	8.40	23.29	132.97	85.57	20.14	84.26	68.40	13.78	9.06	8.51	7.12	19.22	6.68	88.62	33.71	21.57	17.32	108.93	42.20	24.26	8.67	13.90	8.14	15.69	23.36	15.10	11.04	19.65
8	E1_Da	NovelBoundary	0	0.00	0.00	0.95	0.00	0.00	3.41	0.00	0.00	0.00	0.00	0.00	0.00	1.40	0.00	0.00	3.82	0.92	0.00	8.09	0.00	0.00	0.00	0.00	0.00	0.00	3.69	0.00	0.00	0.00
9	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.59	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
10	E1a_E2b	KnownJunction	1	309.50	36.55	135.74	1072.42	691.32	76.62	390.43	656.11	66.42	39.31	45.33	42.68	105.47	44.16	270.48	121.40	90.37	74.75	412.72	225.19	99.19	78.42	62.25	58.26	106.76	156.12	65.35	73.60	53.68
11	E1a_E3a	KnownJunction	0	136.55	31.41	42.41	194.12	300.79	120.93	274.57	100.43	31.12	33.63	41.41	25.87	36.84	26.68	441.49	192.32	67.80	51.50	582.66	160.02	100.36	9.09	52.60	11.48	65.73	61.88	97.85	15.37	63.22
12	E1a_E4a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	1.96	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.15	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.38	0.00	2.29	0.00
13	I1	Intron	0	1.27	0.27	2.83	4.85	2.48	1.16	2.22	3.11	0.85	0.61	2.82	3.49	2.19	0.08	10.12	2.52	1.14	0.52	3.51	2.43	3.14	1.22	2.14	0.18	1.33	3.06	1.70	1.38	0.79
14	I1_AR1	ActiveIntronRegion	0	1.33	0.15	3.79	5.34	2.59	1.05	1.81	3.20	0.90	0.72	2.87	3.36	1.86	0.11	9.99	2.77	1.38	0.76	2.90	2.57	2.95	1.38	2.02	0.27	0.97	3.39	2.50	1.49	0.50
15	I1_SR1	SilentIntronRegion	0	1.15	0.54	0.78	3.85	2.25	1.41	3.11	2.97	0.77	0.39	2.74	3.81	2.93	0.00	10.52	2.00	0.62	0.00	4.88	2.16	3.57	0.88	2.43	0.00	2.13	2.37	0.00	1.15	1.44
16	E2_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	1.88	0.00	0.00	0.00	0.00	0.00	1.36	0.00	0.00	0.00	0.00	1.19	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
17	ER2a	ExonRegion	0	51.44	13.14	46.57	358.32	146.96	24.06	123.97	175.82	25.28	5.05	4.76	18.55	42.22	10.43	84.01	43.02	40.57	30.02	160.67	66.05	27.10	19.83	18.99	11.83	13.58	28.29	8.24	18.75	18.12
18	ER2b	ExonRegion	0	167.09	23.90	31.79	149.40	64.88	29.59	156.07	276.26	32.18	21.87	12.57	18.73	48.61	25.77	145.48	45.41	42.40	24.96	128.76	110.77	42.77	45.16	18.17	31.59	54.59	44.08	13.31	13.35	22.23
19	E2_Da	NovelBoundary	0	3.01	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.85	0.00	0.00	2.99	8.37	0.00	3.40	4.62	8.09	3.23	0.00	0.00	0.00	0.00	1.67	0.00	0.00	0.00	0.00
20	E2a_E3a	KnownJunction	0	82.82	60.69	9.59	41.20	6.78	38.14	340.94	67.93	37.18	67.15	37.93	42.95	77.80	30.35	311.54	93.02	68.34	32.36	315.38	56.15	45.45	11.86	45.46	16.87	59.18	36.95	27.23	25.66	33.81
21	E2a_E4a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	2.84	2.92	2.39	0.00	1.52	4.52	0.00	0.00	1.13	8.37	0.00	0.00	4.62	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
22	I2_SR1	SilentIntronRegion	0	3.01	0.33	0.31	1.35	0.92	2.12	1.10	0.00	0.52	1.99	0.76	1.16	1.04	2.14	1.74	0.80	4.69	2.83	2.71	3.43	3.58	0.00	0.14	0.20	1.25	0.77	1.79	0.61	0.88
23	I2_AR2	ActiveIntronRegion	0	3.07	0.78	0.00	4.81	0.07	1.83	0.29	0.00	0.52	2.30	0.00	0.85	0.00	0.54	0.00	2.20	3.78	6.50	4.59	1.66	4.11	0.00	0.19	0.00	0.96	1.86	0.72	0.36	0.00
24	I2_AR5	ActiveIntronRegion	0	2.18	0.11	0.00	0.00	2.21	0.70	0.11	0.00	2.44	1.31	0.00	1.39	0.51	1.06	1.66	1.68	2.16	0.91	1.08	0.00	2.82	0.00	0.00	2.01	1.45	0.36	0.01	0.55	0.00
25	I2_AR6	ActiveIntronRegion	0	10.00	0.00	0.00	0.00	0.00	1.37	0.67	0.00	0.19	0.00	0.00	3.71	0.00	0.91	0.00	0.00	4.01	0.00	0.00	0.00	4.28	0.00	0.00	2.15	0.00	0.00	1.83	0.00	0.00
26	I2_SR5	SilentIntronRegion	0	3.32	1.58	0.28	2.37	0.81	1.22	0.65	0.00	2.87	1.20	0.20	1.91	0.00	0.47	0.91	2.76	2.28	0.64	2.12	1.37	2.26	0.00	0.00	1.28	0.24	0.26	0.55	0.54	0.00
27	E3_Aa	NovelBoundary	0	0.00	0.00	1.00	0.00	0.00	1.96	0.00	0.00	4.99	3.28	0.00	0.00	0.00	0.00	6.98	0.00	2.30	0.00	0.00	4.05	0.00	0.00	0.00	0.00	1.93	0.00	0.00	0.00	0.00
28	ER3a	ExonRegion	0	155.85	60.86	57.56	262.54	193.28	102.28	343.25	116.14	47.60	55.72	61.55	51.04	73.17	46.56	375.01	118.79	96.95	34.20	353.42	219.21	102.53	26.22	40.57	61.64	68.11	42.44	70.92	20.66	52.23
29	E3_Da	NovelBoundary	0	5.66	4.65	1.02	0.00	0.00	0.00	5.84	4.63	4.57	0.00	2.85	1.36	3.95	2.22	0.00	0.00	2.43	0.00	8.09	3.64	2.05	0.00	0.00	2.63	1.89	0.00	11.68	0.00	1.58
30	E3a_E4a	KnownJunction	0	149.17	38.88	26.66	231.22	69.56	69.06	337.97	88.19	49.58	41.30	50.74	43.88	66.65	48.30	304.96	79.48	131.95	14.26	210.40	164.24	70.83	10.79	30.58	59.58	46.67	37.85	57.80	16.80	33.34
31	I3_AR1	ActiveIntronRegion	0	2.01	0.00	1.56	3.35	0.00	1.93	9.43	0.86	0.53	1.35	0.00	0.58	0.00	0.63	0.00	0.00	4.18	0.00	2.99	0.00	5.33	0.00	0.00	3.00	1.34	0.74	0.00	0.00	0.00
32	E4_Aa	NovelBoundary	0	16.10	7.85	0.00	50.47	17.24	16.46	71.40	11.65	4.75	9.35	7.40	3.04	6.21	5.18	62.19	23.87	0.00	5.01	0.00	32.91	34.41	1.90	5.76	11.66	2.96	5.02	1.94	10.51	1.29
33	ER4a	ExonRegion	0	11.77	8.17	6.55	29.08	19.68	12.99	28.92	8.38	6.24	5.68	6.62	5.69	5.72	7.03	30.36	11.38	13.92	4.63	38.40	30.26	19.94	3.33	2.53	8.85	7.00	4.46	12.24	2.72	8.02
34	ER4b	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
35	IG49_AR4	ActiveIntergenicRegion	0	0.00	1.17	1.36	0.00	0.88	1.60	0.37	1.05	0.61	1.57	0.45	2.00	0.87	1.59	0.84	0.00	1.62	0.00	1.74	0.75	3.39	0.59	0.82	1.13	0.39	1.23	0.63	0.44	0.47
36	IG49_SR3	SilentIntergenicRegion	0	0.05	1.99	1.03	1.47	2.68	2.23	0.69	1.09	1.60	2.53	0.73	2.02	1.36	1.20	2.10	1.22	2.69	0.84	1.65	1.24	4.62	0.37	0.21	2.11	1.35	1.18	1.94	1.33	0.41
37	IG49_AR3	ActiveIntergenicRegion	0	0.00	2.82	0.00	0.84	0.57	2.42	2.13	0.87	1.77	2.39	1.68	1.62	0.04	2.33	10.89	3.21	1.79	0.68	4.42	1.20	3.51	0.42	0.42	5.56	1.12	1.01	2.52	0.08	1.08