Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	CHCHD8	Gene	0	1177.11	309.75	583.87	754.64	1034.25	375.61	879.40	865.61	490.15	278.72	323.92	405.79	826.66	214.32	791.79	290.70	269.83	307.08	433.35	736.23	312.97	589.95	438.80	274.55	370.49	305.46	267.38	416.08	395.03
2	355693	Transcript	0	859.01	171.55	852.67	1016.26	1416.26	221.16	593.83	553.64	280.39	191.49	245.65	372.72	715.07	156.04	577.87	231.50	283.18	224.95	262.49	491.87	190.85	433.37	374.29	170.44	246.65	270.45	245.19	436.31	437.00
3	IG21	Intergenic	0	2.31	1.16	1.80	2.57	45.61	4.44	6.52	5.29	0.40	0.00	1.28	1.11	1.63	0.00	0.00	0.64	0.54	2.08	2.29	0.99	4.10	5.18	1.95	0.00	0.00	2.82	0.66	1.76	3.85
4	IG21_AR1	ActiveIntergenicRegion	0	2.34	1.17	1.83	2.61	46.26	4.51	6.61	5.37	0.41	0.00	1.30	1.12	1.65	0.00	0.00	0.65	0.54	2.11	2.33	1.00	4.16	5.25	1.98	0.00	0.00	2.86	0.67	1.78	3.90
5	ER1a	ExonRegion	0	1233.53	160.15	1085.33	2093.06	3084.36	215.38	733.08	591.13	243.19	267.18	335.21	514.78	860.79	184.96	703.35	380.46	355.99	323.54	278.47	587.56	241.64	629.50	604.26	186.84	329.31	385.53	372.60	655.42	525.84
6	E1_Da	NovelBoundary	0	15.81	0.00	24.84	9.49	33.75	7.29	16.25	6.37	7.64	2.04	0.00	9.61	16.88	1.26	18.34	3.14	29.33	0.00	8.09	0.00	0.00	6.03	18.71	0.00	0.00	19.10	4.17	16.09	15.55
7	E1a_E2a	KnownJunction	1	173.30	26.37	950.38	365.38	381.84	52.83	151.05	170.50	77.50	27.16	79.21	210.96	461.93	65.23	227.62	34.35	234.30	46.23	56.65	133.56	9.19	85.52	100.12	39.18	35.08	130.20	108.49	266.80	406.20
8	I1	Intron	0	21.90	10.63	9.71	6.13	26.82	17.51	7.62	6.30	10.90	9.94	7.39	8.16	7.40	12.16	12.99	11.89	23.99	17.82	13.66	10.24	10.72	3.57	4.31	11.04	10.55	8.56	4.45	9.25	6.69
9	I1_AR1	ActiveIntronRegion	0	28.60	9.68	14.31	9.01	52.28	19.19	11.68	9.97	6.71	9.45	6.59	9.31	8.96	9.12	17.23	12.77	20.49	17.39	14.48	14.14	10.23	6.58	6.60	6.50	8.28	13.06	7.15	13.76	10.70
10	I1_AR2	ActiveIntronRegion	0	30.64	14.06	14.94	6.99	19.04	21.89	9.49	6.58	19.56	17.12	12.18	13.12	11.88	24.24	16.59	13.36	48.01	25.34	17.64	11.58	12.97	3.22	5.58	22.71	18.34	8.68	4.76	9.00	7.60
11	I1_SR2	SilentIntronRegion	0	6.53	7.35	0.00	0.00	11.15	11.51	0.00	1.40	1.71	6.59	2.72	0.00	0.00	4.14	7.69	7.55	0.00	11.98	12.16	5.71	3.26	1.37	0.00	3.27	5.44	1.20	2.79	1.24	0.00
12	I1_SR3	SilentIntronRegion	0	15.02	17.75	1.95	2.79	5.70	21.41	0.78	4.30	19.86	7.87	6.49	5.77	6.05	11.63	11.46	15.18	24.41	19.75	16.17	9.35	18.88	1.40	2.11	9.21	11.69	6.73	3.57	8.25	4.95
13	I1_AR4	ActiveIntronRegion	0	6.43	3.83	3.00	0.00	2.93	10.72	4.84	4.42	8.41	4.33	2.14	4.07	1.93	5.16	6.06	17.42	7.17	11.75	5.75	5.69	5.99	0.00	1.08	7.74	3.43	3.77	0.00	7.79	0.81
14	E2_Aa	NovelBoundary	0	27.66	13.19	13.65	16.61	27.41	13.66	4.92	2.49	22.44	8.11	21.32	10.99	11.43	25.48	25.91	26.01	36.06	0.00	8.09	3.14	7.38	1.94	2.17	23.81	19.02	7.42	16.35	7.50	9.90
15	ER2a	ExonRegion	0	1170.19	328.12	522.31	590.34	782.58	395.29	897.36	899.30	520.47	280.14	322.54	392.41	822.47	217.92	802.65	279.69	259.25	305.06	452.36	754.48	321.73	585.10	418.48	285.31	375.55	295.63	254.46	386.70	378.97
16	IG20	Intergenic	0	1.89	2.75	2.20	2.69	3.07	3.62	3.92	3.03	5.03	4.62	3.15	5.34	1.69	2.60	4.54	4.21	5.40	2.60	3.10	4.95	3.50	2.24	1.65	5.14	2.76	2.54	3.72	4.97	5.01
17	IG20_SR5	SilentIntergenicRegion	0	3.96	6.30	1.15	10.56	6.92	9.66	15.20	4.04	7.88	22.60	24.43	9.81	5.12	3.07	19.06	9.46	16.93	9.89	4.09	13.94	21.83	1.18	6.20	13.36	10.56	9.74	29.51	25.79	23.06
18	IG20_AR11	ActiveIntergenicRegion	0	3.57	8.76	0.19	20.72	0.00	4.70	9.24	4.30	10.39	14.44	23.11	9.59	3.68	4.16	22.87	6.12	15.19	4.78	2.64	13.58	14.98	0.60	1.21	8.25	7.98	8.38	15.26	21.60	20.47
19	IG20_SR4	SilentIntergenicRegion	0	0.00	0.66	0.00	8.78	0.00	1.92	2.82	3.31	5.28	4.04	8.81	6.06	1.69	2.90	8.96	6.07	12.12	1.64	0.00	5.90	6.70	0.00	0.00	3.66	2.00	0.00	2.75	4.56	10.33
20	IG20_SR3	SilentIntergenicRegion	0	6.06	7.20	7.72	4.76	5.06	12.57	9.31	8.50	9.20	11.02	4.71	11.73	4.15	7.12	9.63	8.06	10.27	7.93	6.32	11.89	4.84	5.10	4.09	13.79	7.68	6.37	8.11	11.37	15.77
21	IG20_AR9	ActiveIntergenicRegion	0	4.29	7.50	5.36	10.53	5.87	6.06	8.61	4.67	16.91	8.67	9.06	12.85	4.49	6.28	10.22	13.45	18.54	7.12	8.10	15.77	8.19	8.18	3.86	16.08	6.68	6.08	9.54	8.05	12.77
22	IG20_AR8	ActiveIntergenicRegion	0	0.56	0.00	1.17	1.15	2.19	2.12	1.58	1.26	3.33	1.51	1.87	3.38	0.96	0.78	1.68	1.74	2.61	0.34	0.00	0.89	3.25	0.44	0.95	1.13	0.82	1.64	1.28	3.51	0.70
23	IG20_AR7	ActiveIntergenicRegion	0	1.02	1.12	0.00	1.35	9.83	1.63	4.46	1.41	3.19	1.90	0.09	4.13	0.00	0.74	0.00	3.26	2.11	0.00	0.00	2.96	1.43	0.38	0.00	0.00	0.75	0.00	0.00	2.53	0.00
24	IG20_AR6	ActiveIntergenicRegion	0	2.14	6.57	1.12	0.00	5.54	1.37	6.05	1.84	0.75	4.49	1.19	5.22	0.00	0.91	0.00	2.53	3.01	0.00	0.00	5.62	0.63	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
25	IG20_AR5	ActiveIntergenicRegion	0	1.15	5.39	1.12	0.00	3.70	1.09	3.57	0.66	2.74	4.70	1.43	5.52	0.53	0.63	0.00	2.08	3.13	0.00	0.00	2.59	0.11	0.00	0.09	0.00	0.95	2.82	0.00	0.67	0.00
26	IG20_AR4	ActiveIntergenicRegion	0	0.00	0.00	1.12	0.00	8.78	1.37	1.06	2.28	4.49	1.86	1.19	6.48	2.29	0.91	0.00	2.53	1.72	0.00	0.00	1.47	2.24	1.03	1.81	0.72	2.38	6.14	0.00	3.80	0.00
27	IG20_AR3	ActiveIntergenicRegion	0	0.00	0.00	0.14	0.00	4.98	1.20	0.00	3.68	5.48	3.25	1.19	6.03	4.22	0.91	0.00	0.00	3.01	0.00	0.00	2.81	2.85	3.61	1.81	4.30	4.11	4.71	0.00	4.89	0.00
28	IG20_AR1	ActiveIntergenicRegion	0	0.00	0.00	0.00	0.00	8.03	0.00	8.29	0.00	0.00	3.56	0.98	1.02	1.07	2.24	0.00	0.00	0.00	1.58	5.26	2.27	1.17	2.97	1.49	5.31	1.18	2.59	0.00	0.00	2.21