Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	RAB30	Gene	0	712.92	227.60	485.90	669.84	200.06	476.33	530.70	209.20	85.11	490.71	677.21	223.52	341.09	300.16	88.53	215.96	162.72	518.50	361.48	686.64	134.64	111.12	183.93	90.73	184.17	206.87	243.18	205.41	122.03
2	457539	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
3	260056	Transcript	0	941.74	292.45	569.37	556.58	232.13	408.72	523.01	387.75	61.60	457.30	861.31	274.49	439.43	391.43	76.16	265.88	176.77	708.36	426.35	758.20	99.88	151.57	216.41	116.58	290.29	257.22	261.47	230.76	116.10
4	IG4_AR1	ActiveIntergenicRegion	0	2.73	6.16	0.00	22.85	43.21	5.98	5.14	0.00	0.00	2.65	5.31	0.79	2.27	2.31	0.00	1.58	0.00	34.80	37.45	11.31	3.64	0.00	3.23	0.00	0.91	3.01	8.54	1.02	0.00
5	ER1a	ExonRegion	0	136.93	44.28	138.01	298.18	216.30	138.77	140.40	43.08	15.48	156.83	234.01	51.09	77.92	73.51	18.39	111.25	60.22	139.69	63.06	165.68	51.57	45.58	58.07	9.38	40.95	101.88	103.88	100.49	31.76
6	E1_Da	NovelBoundary	0	4.84	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.86	0.00	0.00	1.69	0.00	1.15	0.00	0.00	1.37	0.00	8.09	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.25	0.00
7	E1a_E2a	KnownJunction	1	13.68	4.07	13.25	0.00	0.00	5.06	5.03	2.44	2.95	1.72	6.99	7.23	7.83	2.28	0.00	10.48	0.00	13.87	0.00	44.66	5.17	4.18	4.33	0.00	9.24	7.90	0.00	19.37	0.00
8	E1a_E3a	NovelJunction	0	266.14	31.02	60.14	92.10	59.98	168.51	119.18	64.70	16.38	91.79	122.65	55.81	68.66	98.15	8.17	61.28	58.16	243.38	64.51	410.60	47.53	79.39	41.07	39.96	63.65	56.86	45.77	40.30	13.77
9	I1	Intron	0	2.24	1.95	0.61	0.90	0.77	1.66	0.92	0.22	2.39	3.69	3.11	2.19	2.20	1.14	3.15	1.05	4.29	2.02	2.89	1.19	2.95	0.38	0.58	1.08	1.27	1.84	1.97	3.78	0.87
10	I1_SR1	SilentIntronRegion	0	4.53	0.00	0.92	0.00	0.00	1.47	0.00	0.00	0.38	0.56	0.00	0.03	0.86	0.29	0.00	1.09	0.61	2.11	0.00	0.00	0.58	0.00	0.33	0.00	0.00	1.54	0.50	1.19	0.00
11	I1_AR1	ActiveIntronRegion	0	6.43	0.00	1.12	0.00	0.00	8.25	0.00	0.00	3.37	1.44	0.00	1.86	1.30	0.91	0.00	2.53	1.00	0.91	0.00	0.00	4.28	1.20	3.62	0.00	0.00	11.00	1.83	8.15	0.00
12	I1_SR2	SilentIntronRegion	0	2.28	1.52	0.22	0.00	2.36	2.13	0.66	0.53	1.10	2.31	1.99	1.69	1.57	0.94	0.00	0.36	2.54	3.39	0.00	1.13	2.18	0.70	2.47	0.33	0.00	2.42	1.70	5.34	0.79
13	I1_AR2	ActiveIntronRegion	0	4.29	0.40	0.69	0.00	2.51	0.92	2.25	0.00	0.41	3.23	3.15	1.11	0.78	1.09	0.00	0.00	3.67	6.67	1.24	1.95	1.49	1.06	2.03	1.23	0.56	3.31	3.16	4.08	0.84
14	I1_SR3	SilentIntronRegion	0	3.51	2.27	1.10	1.78	1.30	2.76	1.65	0.33	3.70	5.01	4.91	3.73	3.80	2.02	5.68	2.12	8.51	3.06	4.45	2.23	3.74	0.59	1.14	2.11	2.10	3.47	3.32	6.00	1.87
15	I1_AR4	ActiveIntronRegion	0	3.38	2.54	0.61	0.00	0.30	2.00	0.61	0.56	3.16	3.41	1.88	2.13	1.92	0.79	2.62	0.30	2.63	1.64	2.71	1.24	3.11	0.22	0.00	1.17	1.47	1.52	2.55	3.95	0.33
16	I1_SR5	SilentIntronRegion	0	1.24	1.90	0.34	0.58	0.57	0.77	0.50	0.08	1.46	2.96	1.96	1.32	1.33	0.65	1.94	0.44	1.69	1.30	1.71	0.43	2.51	0.21	0.24	0.42	0.85	0.83	0.88	2.60	0.37
17	I1_AR5	ActiveIntronRegion	0	0.69	2.42	0.36	0.00	0.00	0.59	0.43	0.20	1.93	1.09	4.22	1.06	0.90	1.16	1.58	0.53	1.60	1.69	2.74	1.02	2.14	0.39	0.00	0.46	0.46	0.34	0.59	1.58	0.14
18	I1_SR6	SilentIntronRegion	0	1.38	0.91	0.10	0.21	0.00	1.41	0.29	0.16	1.65	3.25	2.05	0.99	1.00	0.33	0.72	0.49	1.92	1.07	2.61	0.54	2.54	0.32	0.16	0.31	0.46	0.64	1.55	1.48	0.00
19	I1	Intron	0	2.13	2.64	0.75	0.59	0.32	1.23	0.73	0.43	2.97	2.85	2.17	2.37	2.69	1.71	2.75	0.81	2.77	3.11	2.38	0.37	2.48	0.45	0.48	0.75	1.40	1.56	1.18	4.94	3.86
20	I1_SR1	SilentIntronRegion	0	2.16	3.17	0.73	0.66	0.34	1.42	0.56	0.08	3.46	3.04	2.00	2.15	3.14	0.65	3.19	0.50	3.05	1.69	2.65	0.22	2.46	0.33	0.32	0.52	0.86	1.09	1.05	4.41	0.81
21	I1_AR1	ActiveIntronRegion	0	2.28	2.52	1.63	1.40	0.00	0.92	2.76	1.08	1.74	3.16	2.34	4.98	1.86	12.68	3.05	3.88	2.89	14.10	3.35	1.62	4.31	1.73	2.60	2.31	4.14	4.57	3.94	13.38	36.28
22	I1_SR2	SilentIntronRegion	0	1.64	0.65	0.00	0.00	0.00	0.60	0.00	0.00	1.69	2.97	3.32	2.46	1.32	0.71	3.37	0.69	1.32	1.52	1.46	0.00	2.24	1.05	0.50	0.60	2.46	2.15	0.00	3.87	0.78
23	I1_SR3	SilentIntronRegion	0	0.00	0.00	1.00	0.00	0.00	0.97	0.00	5.22	2.40	2.65	2.38	0.53	1.05	0.60	0.00	0.00	0.96	7.51	2.26	0.00	0.81	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
24	I1_AR3	ActiveIntronRegion	0	2.53	0.95	0.53	0.00	0.72	0.61	0.89	1.38	1.57	1.37	2.49	2.17	1.50	1.01	0.00	0.73	2.01	3.84	0.47	0.70	1.73	0.00	0.00	1.27	2.54	2.32	0.81	3.61	1.38
25	E2_Aa	NovelBoundary	0	0.00	0.00	2.59	0.00	0.00	0.00	2.92	0.00	11.57	0.00	1.52	1.84	4.30	2.30	0.00	0.00	2.41	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.45	0.00	0.00	13.34	1.68
26	ER2a	ExonRegion	0	25.76	28.95	19.72	28.60	4.34	28.04	47.48	10.03	5.33	55.86	57.29	17.37	26.10	25.60	5.38	17.92	15.99	63.18	28.90	61.39	17.79	11.82	19.84	5.96	14.45	15.51	17.64	36.17	37.10
27	E2_Da	NovelBoundary	0	0.00	0.00	4.58	0.00	0.00	1.96	0.00	2.29	4.05	3.99	4.21	0.00	3.57	2.08	0.00	0.00	2.57	0.00	0.00	3.80	1.48	0.00	2.36	2.63	6.97	5.88	0.00	3.59	1.91
28	E2a_E3a	KnownJunction	0	6.96	39.85	17.84	111.51	19.31	35.22	43.31	1.84	3.38	62.36	95.69	16.78	12.23	25.13	0.00	10.25	19.04	73.98	72.83	67.23	24.39	0.00	21.28	8.97	21.78	1.85	27.33	51.49	17.10
29	I2_AR1	ActiveIntronRegion	0	1.91	0.00	0.42	1.58	0.69	0.72	0.29	1.04	5.09	1.63	2.68	1.79	2.75	1.54	7.86	0.00	3.65	1.44	2.26	1.94	1.41	0.51	0.26	0.91	1.70	1.45	0.52	4.27	1.04
30	I2_AR2	ActiveIntronRegion	0	3.72	2.06	0.72	0.00	3.00	0.00	0.75	0.49	0.00	2.31	0.20	0.00	0.00	0.00	0.00	0.24	0.00	2.56	1.96	2.17	3.18	0.17	2.51	0.00	0.00	0.00	0.00	4.14	0.39
31	I2_AR4	ActiveIntronRegion	0	9.25	3.24	13.49	65.49	5.81	15.17	26.22	14.55	6.55	14.31	18.39	5.25	7.29	0.70	0.00	6.25	0.64	5.77	9.11	0.90	3.73	0.61	4.14	5.63	0.47	0.51	0.60	0.08	0.00
32	E3_Aa	NovelBoundary	1	37.87	11.92	39.32	275.44	0.00	40.78	62.25	24.53	3.84	13.74	22.14	15.81	24.90	0.00	0.00	27.62	2.45	9.25	0.00	0.00	7.02	1.85	0.00	3.05	0.00	0.00	0.00	3.82	2.05
33	ER3a	ExonRegion	0	474.32	149.90	245.04	583.93	98.40	479.73	513.18	139.98	65.43	469.21	650.85	168.67	260.36	228.06	38.71	273.69	153.35	478.14	261.65	594.19	143.12	90.03	152.36	56.50	162.93	212.61	213.96	197.94	121.30
34	E3_Da	NovelBoundary	0	5.19	0.00	1.02	0.00	0.00	3.49	0.00	0.00	3.11	0.00	1.30	0.00	0.00	0.00	0.00	0.00	0.00	9.25	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
35	E3a_E4a	KnownJunction	0	762.74	158.42	606.30	1761.13	199.10	661.15	764.50	241.56	72.02	621.95	1028.28	327.40	401.33	278.69	40.26	195.91	228.18	387.99	258.73	533.00	118.97	94.12	223.94	84.28	146.12	307.52	369.80	306.39	156.32
36	E3a_E5a	NovelJunction	0	19.23	0.00	12.78	62.12	19.31	3.68	12.02	4.98	1.31	11.10	17.53	3.07	5.80	12.41	0.00	6.73	0.00	19.26	0.00	19.68	4.09	0.00	4.97	4.73	3.37	0.00	11.43	0.00	1.65
37	I3	Intron	0	4.69	0.83	0.58	0.73	0.89	2.01	1.14	0.00	0.67	2.23	2.34	0.90	1.12	0.80	0.50	1.11	0.85	2.88	4.41	0.67	2.05	0.07	0.22	0.26	0.52	0.22	0.82	0.86	0.62
38	I3_AR1	ActiveIntronRegion	0	6.58	0.00	1.28	0.00	0.83	1.14	0.68	0.00	0.78	1.92	1.66	0.62	1.18	0.25	2.64	0.00	1.12	2.28	2.63	0.00	3.42	0.00	0.00	0.00	0.24	0.00	2.17	2.19	0.53
39	I3_SR1	SilentIntronRegion	0	4.44	0.94	0.48	0.83	0.90	2.13	1.21	0.00	0.66	2.27	2.43	0.94	1.11	0.87	0.21	1.26	0.81	2.97	4.65	0.76	1.87	0.08	0.25	0.30	0.56	0.25	0.63	0.68	0.64
40	E4_Aa	NovelBoundary	0	8.20	0.00	1.10	0.00	0.00	0.00	10.24	0.00	0.00	1.96	4.40	1.42	4.59	0.00	0.00	0.00	1.35	0.00	8.09	0.00	4.09	0.00	0.00	2.39	0.00	2.19	0.00	0.00	1.55
41	ER4a	ExonRegion	0	603.21	219.70	661.96	939.85	199.80	642.53	618.55	196.25	51.91	612.76	893.80	248.19	336.29	301.44	47.94	212.64	175.72	523.25	328.82	718.60	133.59	92.65	179.75	97.85	176.95	218.98	272.88	234.38	118.02
42	E4_Da	NovelBoundary	0	7.79	0.00	0.95	0.00	0.00	0.00	0.00	2.39	1.22	5.63	0.00	2.83	1.53	2.24	0.00	3.82	0.95	4.62	0.00	3.64	0.00	0.00	0.00	0.00	0.00	2.06	0.00	0.00	1.49
43	E4a_E5a	KnownJunction	0	563.49	156.57	659.20	711.14	309.63	456.73	474.37	164.23	64.50	381.68	544.18	191.77	275.61	299.96	69.76	199.28	147.48	541.20	283.01	844.44	80.30	81.92	125.83	94.21	180.94	174.62	183.04	144.36	107.39
44	I4	Intron	0	3.98	1.28	0.84	1.02	0.63	2.93	0.73	0.14	1.84	2.39	1.51	1.16	1.37	0.85	1.09	0.32	1.75	3.11	3.75	1.20	1.57	0.02	0.14	0.69	0.68	0.95	0.71	1.24	0.47
45	I4_SR1	SilentIntronRegion	0	6.32	0.73	0.00	0.00	2.22	4.42	2.20	0.00	1.19	3.42	0.76	0.70	1.03	0.68	0.00	0.00	1.19	3.29	2.18	1.71	2.27	0.00	0.00	0.00	0.65	0.00	0.00	0.00	0.46
46	I4_AR1	ActiveIntronRegion	0	4.16	0.48	0.50	2.13	0.73	3.24	0.06	0.00	0.64	2.70	1.63	0.83	1.06	1.03	0.00	0.74	1.22	3.39	0.95	3.16	0.64	0.00	0.00	1.28	0.64	0.00	0.27	0.24	0.00
47	I4_SR2	SilentIntronRegion	0	7.31	1.18	1.08	1.60	0.89	2.97	1.10	0.17	1.80	2.45	1.55	2.25	1.59	1.37	0.50	0.09	3.97	4.62	4.93	2.68	1.15	0.00	0.33	0.20	0.65	1.29	2.52	1.20	1.40
48	I4_AR2	ActiveIntronRegion	0	5.81	0.00	2.24	2.97	0.00	2.31	0.00	1.33	3.70	3.62	1.35	0.97	3.24	1.25	0.00	1.10	4.40	2.10	2.56	3.54	2.91	0.00	0.00	0.00	0.00	0.00	5.34	2.32	0.00
49	I4_SR3	SilentIntronRegion	0	3.06	1.48	0.87	0.80	0.45	2.78	0.63	0.14	2.00	2.22	1.55	1.03	1.35	0.73	1.46	0.32	1.35	2.79	4.02	0.55	1.68	0.03	0.13	0.80	0.71	1.11	0.34	1.45	0.36
50	E5_Aa	NovelBoundary	0	2.95	4.07	0.00	0.00	0.00	6.52	0.00	0.00	0.00	1.56	0.00	3.22	3.34	3.32	0.00	3.37	2.21	9.12	16.18	0.00	0.00	0.00	0.00	0.00	0.00	3.95	1.99	0.00	0.00
51	ER5a	ExonRegion	0	811.54	269.86	461.15	715.50	305.29	547.33	631.50	265.39	69.12	614.37	858.13	296.54	425.76	386.18	78.41	236.33	210.07	630.56	402.30	807.72	132.41	134.69	221.56	93.26	229.88	266.60	277.62	248.35	152.66
52	E5_Da	NovelBoundary	0	23.36	0.00	2.84	0.00	0.00	5.72	2.92	0.00	0.00	9.63	5.92	0.00	3.53	3.28	0.00	2.83	0.00	4.62	0.00	3.06	2.97	1.80	0.00	0.00	4.66	0.00	0.00	1.84	2.44
53	E5a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
54	E5_Db	NovelBoundary	0	22.18	0.00	1.12	0.00	0.00	8.40	0.00	7.61	0.00	1.92	0.00	3.34	0.00	1.31	0.00	0.00	0.97	0.00	0.00	4.13	0.00	0.00	0.00	0.00	0.00	2.06	0.00	6.07	0.00
55	E5b_E6a	KnownJunction	0	934.45	302.39	572.10	572.02	231.37	401.59	517.39	377.82	65.63	447.91	873.78	273.16	434.93	386.70	85.11	271.72	177.73	752.86	436.32	733.62	97.07	144.49	222.17	119.69	292.21	255.90	260.12	240.65	108.05
56	ER5b	ExonRegion	0	949.02	282.50	566.65	541.14	232.89	415.84	528.63	397.67	57.58	466.70	848.84	275.83	443.94	396.15	67.21	260.03	175.80	663.87	416.38	782.77	102.70	158.64	210.66	113.47	288.37	258.53	262.83	220.87	124.15
57	I5	Intron	0	27.49	4.26	2.68	2.09	1.96	10.67	4.19	0.87	2.80	7.52	6.29	3.40	1.65	4.50	5.09	5.76	2.28	18.46	12.92	7.38	3.22	0.46	0.99	1.25	1.61	1.43	1.20	4.04	0.59
58	I5_AR1	ActiveIntronRegion	0	21.52	4.14	1.85	3.93	1.53	10.76	4.66	0.43	2.45	5.25	6.66	3.26	1.14	4.83	4.96	5.73	2.42	17.06	13.31	7.29	3.80	0.00	0.71	1.01	1.57	1.35	1.55	1.59	0.16
59	I5_SR1	SilentIntronRegion	0	33.22	4.37	3.45	0.50	2.38	10.73	3.83	1.25	3.12	9.65	6.06	3.58	2.12	4.25	5.30	5.91	2.21	19.93	12.82	7.56	2.77	0.88	1.21	1.46	1.69	1.52	0.91	6.26	0.98
60	E6_Aa	NovelBoundary	0	53.97	3.49	12.03	0.00	0.00	9.94	2.92	0.00	12.00	8.39	16.29	14.19	4.97	15.07	0.00	7.04	8.49	66.14	16.18	11.25	1.76	0.00	2.51	5.20	3.52	0.00	5.96	4.54	1.32
61	I5_AR2	ActiveIntronRegion	0	7.42	4.55	1.73	0.00	0.00	4.02	1.55	1.84	2.94	2.44	1.10	0.00	1.10	2.37	0.00	0.00	0.00	8.19	0.70	3.03	0.00	0.00	2.64	1.82	0.00	0.48	0.00	1.63	0.00
62	ER6a	ExonRegion	0	888.17	277.26	601.96	771.53	208.76	547.57	616.90	252.69	112.08	556.52	760.15	261.46	407.20	354.79	118.57	243.05	184.86	606.85	447.49	816.17	159.34	130.78	216.98	114.47	217.91	230.09	282.13	229.49	139.59
63	IG3	Intergenic	0	72.09	107.50	44.95	158.31	89.62	153.86	128.19	17.54	79.47	187.05	291.94	85.54	118.73	63.69	63.97	55.78	51.40	129.96	156.60	141.40	58.54	12.07	46.40	46.67	46.69	32.63	91.08	55.94	36.47
64	IG3_AR8	ActiveIntergenicRegion	0	170.82	192.54	94.00	307.33	154.53	350.57	267.90	37.21	113.18	367.88	563.30	131.13	204.91	144.44	71.43	114.76	92.57	276.18	316.17	320.03	113.83	25.15	83.52	72.78	94.25	68.13	196.80	104.37	66.88
65	IG3_SR6	SilentIntergenicRegion	0	24.92	3.49	15.71	16.00	48.88	19.42	17.51	2.99	8.99	43.67	90.97	13.22	21.27	10.94	10.50	11.23	11.83	58.51	29.14	19.50	12.39	8.56	27.69	8.20	22.78	16.50	19.23	38.00	5.96
66	IG3_AR7	ActiveIntergenicRegion	0	67.25	89.55	96.96	187.91	117.12	112.53	104.70	21.36	22.66	249.49	474.74	95.87	106.99	58.77	32.15	50.41	55.13	130.66	134.90	104.80	64.41	14.33	80.47	45.68	63.34	50.22	85.00	91.90	31.28
67	IG3_SR5	SilentIntergenicRegion	0	46.06	52.10	32.88	130.54	95.87	81.37	73.06	16.12	17.85	173.51	361.73	73.35	79.34	31.30	40.28	27.65	30.67	104.40	107.65	89.73	43.27	10.66	42.47	33.83	43.49	41.26	79.26	63.09	21.85
68	IG3_AR5	ActiveIntergenicRegion	0	44.67	123.24	21.78	169.66	129.46	122.10	119.23	13.96	112.51	191.50	290.13	126.14	139.22	51.54	106.86	55.43	65.23	127.85	156.57	117.18	64.62	9.38	52.96	74.12	42.26	25.15	79.26	56.14	41.12
69	IG3_SR4	SilentIntergenicRegion	0	60.31	110.34	23.05	169.52	160.99	269.87	228.51	27.53	255.29	266.97	427.84	164.28	199.22	67.45	256.86	72.82	87.20	152.09	186.79	171.32	125.72	25.57	78.08	109.81	51.91	48.65	90.99	58.76	62.04
70	IG3_AR4	ActiveIntergenicRegion	0	59.41	185.50	52.83	277.45	171.84	210.97	213.04	17.14	251.60	262.26	380.66	230.02	265.50	67.95	216.60	79.55	107.84	170.08	226.83	176.54	112.00	15.58	79.19	104.85	62.70	36.36	132.41	84.36	78.36
71	IG3_AR3	ActiveIntergenicRegion	0	46.04	237.16	8.20	152.26	106.00	102.07	132.32	14.37	251.54	174.06	239.61	142.35	224.14	46.40	251.32	68.09	67.72	98.48	221.14	105.95	49.11	12.04	38.26	96.58	43.25	19.72	68.97	54.59	59.63
72	IG3_SR1	SilentIntergenicRegion	0	0.06	2.32	0.14	0.52	0.15	0.06	1.01	0.87	2.72	2.74	1.02	2.04	2.60	0.02	0.66	0.36	0.10	0.98	2.02	1.23	0.42	0.09	0.08	0.37	0.00	0.03	0.00	0.00	0.01
73	IG3_AR1	ActiveIntergenicRegion	0	2.14	0.00	0.00	9.51	0.42	5.18	2.18	0.00	1.39	1.35	0.54	2.27	1.17	0.39	0.00	3.63	0.00	8.19	2.72	0.00	5.92	0.00	0.30	1.00	0.00	0.00	0.00	0.00	1.16