Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	POLD3	Gene	0	226.95	150.24	112.22	191.57	100.07	175.76	107.17	172.34	92.13	143.62	205.34	199.62	256.88	90.01	69.21	81.18	66.70	129.35	160.98	61.74	193.97	91.11	149.57	84.47	99.12	102.44	158.06	88.44	86.54
2	263681	Transcript	0	304.85	134.89	135.53	197.22	106.79	195.23	110.47	186.43	58.23	156.31	220.72	182.08	230.78	101.20	45.43	80.60	67.26	138.23	154.68	59.31	208.03	109.90	182.16	70.86	104.74	121.20	148.76	108.47	83.96
3	ER1a	ExonRegion	0	71.61	57.57	89.66	327.17	141.99	77.04	73.42	58.37	13.96	45.72	68.63	55.72	71.32	31.54	12.78	61.49	21.04	99.30	61.89	20.80	59.44	57.41	105.80	15.42	23.29	55.57	43.24	44.17	21.81
4	E1_Da	NovelBoundary	0	0.00	3.68	16.12	0.00	12.08	0.00	0.00	0.00	0.00	1.68	0.00	0.00	0.00	2.22	0.00	0.00	0.95	4.62	0.00	0.00	4.09	0.00	2.17	0.00	0.00	3.82	2.04	0.00	1.39
5	E1a_E2a	KnownJunction	0	56.45	57.59	119.54	150.34	37.28	35.41	30.32	52.10	18.12	37.03	76.21	79.06	57.07	38.04	0.00	13.23	24.69	67.04	40.46	18.52	31.41	31.94	34.87	19.08	47.05	63.81	49.35	46.05	25.65
6	I1_AR1	ActiveIntronRegion	0	4.48	0.00	4.69	0.00	0.16	1.61	0.32	1.00	0.33	0.69	0.38	1.13	0.94	1.20	0.88	2.63	0.35	4.36	3.07	2.54	0.54	1.73	1.16	0.69	0.46	0.76	0.59	1.57	1.39
7	E2_Aa	NovelBoundary	0	0.00	0.00	2.54	0.00	0.00	3.30	0.00	0.00	4.69	2.04	1.52	0.00	0.00	0.00	0.00	3.82	0.00	4.62	0.00	10.42	0.00	0.00	0.00	5.26	1.82	2.19	0.00	0.00	1.45
8	ER2a	ExonRegion	0	156.55	63.35	69.45	65.42	50.71	68.88	17.85	110.63	28.05	42.18	58.80	81.63	79.26	59.02	9.40	34.21	32.22	54.78	31.36	45.82	69.21	78.90	29.77	33.11	46.45	61.41	37.61	28.87	36.00
9	E2_Da	NovelBoundary	0	0.00	3.49	0.00	0.00	0.00	1.57	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.22	0.00	7.34	1.40	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
10	E2a_E3a	KnownJunction	0	300.71	87.93	37.87	28.90	7.22	137.09	15.68	190.75	43.64	66.75	74.63	98.07	126.52	80.81	0.00	94.02	36.04	80.65	64.51	79.89	176.00	144.10	55.85	48.87	66.34	65.62	25.54	20.22	47.57
11	E3_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.83	0.00	0.00	0.00	0.00	0.00	0.00	0.95	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
12	ER3a	ExonRegion	0	338.52	157.84	55.78	65.32	37.87	294.62	125.84	236.09	54.32	170.83	224.77	192.55	232.38	122.84	15.50	155.46	72.85	189.48	156.65	60.47	284.17	146.23	233.74	65.89	127.31	160.57	95.31	110.86	93.53
13	E3_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.89	0.00	0.00	1.54	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
14	E3a_E4a	KnownJunction	1	208.04	125.36	40.74	28.90	41.41	100.64	102.13	84.20	26.37	124.95	213.22	195.09	227.15	85.99	34.68	59.44	72.55	125.48	113.29	52.68	86.28	68.99	278.26	51.14	87.82	124.24	161.37	163.19	48.17
15	ER4a	ExonRegion	1	306.84	98.38	75.68	63.80	101.75	111.07	73.37	141.16	28.79	121.67	208.89	212.31	200.54	100.48	30.10	55.17	82.17	131.41	119.93	46.24	79.70	103.97	245.79	39.85	77.86	133.00	162.78	153.67	49.73
16	E4a_E5a	KnownJunction	1	356.33	88.03	100.48	127.91	103.01	113.41	42.45	175.92	32.07	114.44	196.89	175.12	132.57	99.75	51.62	66.02	68.99	108.52	121.39	52.10	69.35	119.74	209.51	30.86	68.65	116.25	153.71	129.04	52.99
17	E5_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.25	0.00
18	ER5a	ExonRegion	0	364.71	149.50	253.28	326.82	187.69	155.22	84.93	229.48	35.37	143.30	192.23	198.58	232.20	132.72	29.14	72.78	76.67	126.14	142.78	53.53	126.44	128.40	178.28	57.97	104.75	113.59	93.52	98.70	68.07
19	E5_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.55	0.00	0.00	0.00	1.62	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
20	E5a_E6a	KnownJunction	0	500.37	150.37	175.87	468.48	188.49	176.91	136.57	242.86	49.33	168.49	239.32	180.36	282.84	129.46	34.88	78.18	74.39	172.35	202.31	54.91	159.24	126.79	200.89	62.75	117.60	133.81	154.31	128.14	64.54
21	ER6a	ExonRegion	0	409.47	142.31	173.17	216.65	98.39	255.86	165.22	211.25	49.67	199.63	303.02	224.15	259.02	129.71	43.70	92.60	85.72	156.84	179.50	72.37	246.75	125.30	234.67	71.50	121.63	165.94	156.41	121.82	83.29
22	E6_Da	NovelBoundary	0	8.61	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.04	0.00	3.07	0.00	0.00	0.00	0.00	0.00	9.25	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
23	E6a_E7a	KnownJunction	0	358.45	189.05	223.59	274.79	176.26	393.77	212.50	213.94	66.17	261.08	357.38	270.99	344.59	139.37	98.46	106.64	112.70	221.29	242.32	93.78	429.26	119.06	267.72	59.58	132.07	198.31	196.16	160.72	134.70
24	E7_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	5.89	0.00	0.00	0.00	0.00	2.00	0.00	0.00	0.00	0.00	0.00	3.67	1.40	4.62	8.09	3.97	4.93	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
25	ER7a	ExonRegion	0	338.43	146.43	175.15	244.12	122.49	279.17	166.70	163.91	47.80	217.97	341.38	203.68	269.57	125.63	64.29	99.11	75.14	151.26	152.45	81.16	327.23	109.67	226.65	85.75	108.36	132.36	223.32	124.22	91.62
26	E7_Da	NovelBoundary	0	2.71	0.00	0.00	0.00	0.00	1.92	0.00	0.00	0.00	0.00	1.52	0.00	1.59	0.00	0.00	0.00	0.00	0.00	8.09	4.13	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
27	E7a_E8a	KnownJunction	0	290.62	189.34	152.58	251.07	113.48	269.76	110.37	114.71	54.81	229.57	359.46	148.64	203.07	101.63	32.89	90.35	49.63	161.31	153.76	49.21	240.02	103.21	173.26	118.14	122.18	98.57	240.34	101.64	90.56
28	I7_SR1	SilentIntronRegion	0	0.57	0.89	0.17	0.00	0.00	0.14	0.49	0.00	0.32	0.73	1.69	1.00	0.00	0.82	0.00	0.75	0.15	0.78	1.62	0.28	3.17	0.00	0.42	0.22	0.00	0.32	0.93	0.33	0.20
29	E8_Aa	NovelBoundary	0	0.00	0.00	1.47	0.00	0.00	0.00	0.00	0.00	7.67	0.00	0.00	0.00	0.00	1.04	0.00	0.00	2.79	0.00	0.00	0.00	0.00	0.00	1.82	0.00	0.00	0.00	0.00	3.50	0.00
30	I7_AR4	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.00	1.37	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
31	I7_SR4	SilentIntronRegion	0	0.00	0.00	0.00	0.00	0.00	1.03	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
32	ER8a	ExonRegion	0	328.65	154.21	207.28	189.69	118.57	267.78	136.48	170.61	60.47	191.60	260.30	155.65	240.25	95.83	41.23	91.23	61.74	148.03	172.55	79.83	282.39	101.62	207.47	85.31	114.43	130.46	180.31	103.33	98.14
33	E8_Da	NovelBoundary	0	20.70	22.88	2.29	0.00	6.93	3.38	10.47	7.51	2.77	1.68	14.74	1.27	0.00	6.65	0.00	2.75	2.25	14.64	0.00	12.16	7.46	7.68	4.92	0.00	0.00	0.00	2.09	2.29	0.00
34	E8a_E9a	KnownJunction	0	333.33	160.55	156.71	185.50	113.77	258.64	147.67	232.56	62.49	207.44	271.55	180.96	289.97	107.53	31.89	89.27	67.10	117.13	145.66	64.09	345.11	124.61	203.89	90.56	129.26	140.11	238.00	122.93	93.49
35	E8a_E10a	NovelJunction	0	5.07	0.00	4.29	0.00	0.00	0.00	0.00	0.00	0.00	1.60	4.93	1.11	0.00	2.28	0.00	0.00	1.15	4.62	8.09	4.13	1.64	5.83	0.00	0.00	0.00	0.00	0.00	0.00	0.00
36	I8	Intron	0	9.93	7.53	1.65	5.58	6.81	7.38	2.56	5.21	3.31	4.32	5.42	3.08	0.72	6.29	3.39	5.96	4.59	14.33	17.16	3.24	6.55	0.52	0.74	2.73	2.70	1.68	0.30	3.74	0.22
37	I8_SR1	SilentIntronRegion	0	9.72	5.19	2.01	4.78	6.19	6.87	2.02	3.93	1.57	3.66	6.74	2.87	0.22	5.43	0.67	3.24	4.28	13.76	17.04	4.78	7.13	0.00	0.72	1.43	2.29	1.99	0.24	3.37	0.00
38	I8_AR1	ActiveIntronRegion	0	10.31	11.32	1.07	6.90	7.83	8.23	3.45	7.28	6.11	5.40	3.31	3.42	1.52	7.68	7.77	10.35	5.10	15.31	17.42	0.80	5.64	1.35	0.77	4.83	3.36	1.18	0.39	4.36	0.57
39	E9_Aa	NovelBoundary	0	17.46	23.46	0.00	0.00	6.48	7.79	4.81	20.06	5.45	12.50	1.58	1.27	2.64	15.35	8.17	7.19	15.73	4.62	24.28	8.10	11.55	4.96	4.83	5.80	3.56	0.00	0.00	8.90	3.24
40	ER9a	ExonRegion	0	354.59	176.77	151.04	222.52	142.79	259.34	126.35	240.32	87.25	202.61	319.62	207.98	307.48	134.56	72.02	97.44	75.29	169.90	223.20	82.61	295.83	141.44	210.65	107.92	163.50	137.05	181.66	109.62	127.19
41	E9_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.37	3.95	0.00	5.54	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.25	0.00	0.00	0.00	3.18	0.00	0.00	0.00	0.00
42	E9a_E10a	KnownJunction	0	430.48	151.92	149.36	266.81	176.40	299.80	169.64	235.69	104.88	203.44	220.62	223.73	267.81	124.76	68.96	79.86	88.17	129.46	202.31	44.24	362.40	121.64	239.06	120.17	129.07	123.38	220.76	129.54	119.01
43	I9_AR3	ActiveIntronRegion	0	3.52	2.46	0.00	0.00	0.00	0.00	0.00	0.00	1.18	3.04	0.00	6.71	0.84	0.28	0.00	0.00	0.80	0.19	2.91	0.00	0.23	0.00	0.00	1.69	0.00	0.00	0.00	1.37	0.00
44	I9_AR4	ActiveIntronRegion	0	5.14	1.09	0.00	0.00	0.00	0.00	0.00	0.00	1.27	5.58	0.00	2.72	2.60	0.06	0.00	0.00	1.00	2.37	0.00	0.00	1.43	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
45	I9_AR5	ActiveIntronRegion	0	4.29	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.12	4.48	0.00	1.24	2.60	0.91	0.00	1.52	1.00	3.27	0.45	0.00	1.43	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
46	E10_Aa	NovelBoundary	0	10.62	0.00	0.00	0.00	12.08	1.96	2.12	0.00	0.00	1.96	0.00	0.00	0.00	1.13	0.00	0.00	0.00	4.62	0.00	0.00	0.00	0.00	2.51	0.00	0.00	0.00	0.00	0.00	0.00
47	ER10a	ExonRegion	0	332.58	151.28	172.59	212.26	146.27	255.42	140.87	258.01	82.02	218.41	237.81	240.61	342.87	117.31	65.72	86.60	85.79	148.49	159.89	63.40	293.61	122.01	219.81	82.07	129.21	161.82	173.80	141.02	122.35
48	E10a_E11a	KnownJunction	0	363.65	163.65	174.75	211.81	106.84	228.10	135.08	294.96	107.10	185.27	240.14	231.92	349.75	122.57	125.57	66.40	72.98	196.76	258.73	90.39	226.50	157.57	182.13	120.23	142.71	135.65	170.16	129.45	156.62
49	E11_Aa	NovelBoundary	0	2.30	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.92	2.04	0.00	0.00	0.00	0.00	0.00	3.29	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
50	ER11a	ExonRegion	0	355.22	167.90	150.71	210.86	100.89	180.45	106.27	255.61	89.10	173.31	259.50	217.50	292.94	95.39	60.47	96.33	69.21	157.29	255.51	54.36	232.86	133.88	180.14	96.26	145.09	100.84	175.32	131.99	129.04
51	E11_Da	NovelBoundary	0	3.01	0.00	0.00	0.00	7.37	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.62	0.00	0.00	1.97	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.49
52	E11a_E12a	KnownJunction	0	283.48	115.37	125.92	218.50	52.91	119.32	122.61	215.09	82.13	138.97	165.04	204.66	229.76	73.07	35.68	91.34	76.40	145.51	193.99	42.42	183.38	84.16	149.18	73.87	111.12	148.57	119.47	117.72	89.80
53	I11_AR1	ActiveIntronRegion	0	3.10	2.93	0.02	5.06	0.00	0.00	0.00	0.00	0.00	2.27	0.00	0.80	0.00	0.00	0.00	0.00	0.40	1.39	0.00	0.00	0.13	0.00	1.42	0.00	0.00	0.00	0.00	0.00	2.17
54	E12_Aa	NovelBoundary	0	5.84	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.25	6.35	0.00	0.00	0.00	2.50	0.00	0.00	1.13	0.00	8.09	0.00	2.05	0.00	0.00	2.27	0.00	1.93	0.00	0.00	1.68
55	ER12a	ExonRegion	0	172.35	157.74	85.90	178.33	89.72	152.47	98.55	159.76	115.26	130.41	187.18	208.84	269.08	79.66	85.91	76.65	65.46	120.82	163.25	61.35	178.03	76.99	122.37	93.50	93.20	86.58	168.92	77.93	87.29
56	IG34_AR1	ActiveIntergenicRegion	0	1.31	3.76	0.00	1.46	0.00	4.49	2.06	1.50	8.46	3.83	5.34	4.78	8.19	1.94	4.12	1.52	0.61	2.36	2.61	1.69	2.62	0.37	3.69	4.39	1.75	0.32	1.49	1.66	0.00