Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	FAM168A	Gene	0	38.29	59.87	57.50	13.87	21.67	59.63	17.32	22.10	19.01	69.24	35.65	45.23	44.28	73.60	23.91	59.34	81.52	132.23	32.44	77.57	53.27	50.87	85.28	31.88	48.46	37.46	39.18	56.76	76.70
2	64778	Transcript	0	0.16	0.00	6.04	0.00	0.12	7.07	0.15	0.83	0.00	4.57	0.70	0.99	2.81	5.30	0.28	0.12	5.84	13.99	0.00	2.09	4.26	2.67	3.51	1.39	1.48	0.00	2.80	0.00	17.67
3	450446	Transcript	0	0.00	0.00	6.08	0.00	0.00	3.38	0.00	0.00	0.00	2.00	0.00	0.00	0.00	5.38	0.00	0.00	2.39	0.00	0.00	0.00	0.00	2.48	0.00	3.05	0.00	0.00	0.00	0.00	0.00
4	356467	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
5	ER1a	ExonRegion	0	10.76	1.36	19.36	9.81	14.52	15.20	8.29	3.62	1.48	17.88	6.38	9.92	11.03	13.07	2.40	23.63	13.67	30.24	2.93	20.86	14.21	31.21	32.15	5.02	4.96	9.82	11.51	19.20	27.51
6	E1a_E2a	KnownJunction	0	52.62	3.49	25.46	0.00	6.19	50.03	0.00	13.49	3.87	34.75	25.09	15.78	24.74	36.43	0.00	39.55	27.46	46.88	8.09	42.76	25.59	109.44	48.07	16.81	24.55	13.22	7.36	8.36	39.48
7	E1a_E3a	NovelJunction	0	0.00	3.59	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.92	1.62	2.19	0.00	0.00	3.38	0.00	0.00	0.00	0.00	0.00	4.48	0.00	0.00	0.00	0.00	0.00	0.00
8	I1_AR2	ActiveIntronRegion	0	0.00	1.91	0.44	0.00	0.00	0.54	0.53	0.24	1.56	0.36	0.00	1.67	0.51	0.00	0.00	0.00	0.78	0.76	0.00	0.26	2.70	0.23	0.00	0.28	0.12	0.00	1.20	0.43	0.00
9	I1_AR5	ActiveIntronRegion	0	2.07	0.00	0.00	0.00	0.00	0.00	0.65	0.00	2.86	1.35	0.00	2.23	1.76	0.00	5.60	0.33	0.94	0.00	0.00	0.00	0.00	0.00	0.00	2.01	0.00	0.00	0.00	0.00	0.30
10	I1_AR6	ActiveIntronRegion	0	4.29	0.00	0.00	0.00	0.00	0.00	2.02	0.00	6.20	1.12	0.00	2.15	0.19	0.00	1.66	2.53	2.00	0.00	0.00	2.19	0.00	1.14	0.00	2.15	1.32	0.00	0.00	0.00	1.04
11	I1_AR7	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.00	0.17	0.51	0.00	0.14	0.36	0.00	0.00	1.22	0.00	0.00	0.94	1.88	1.46	0.80	0.35	1.80	0.00	0.23	0.00	0.36	0.40	1.15	0.00	0.84
12	I1_AR9	ActiveIntronRegion	0	0.00	0.71	0.00	0.00	0.00	0.00	0.26	0.00	2.37	2.22	0.00	0.47	0.00	0.17	0.70	0.32	1.91	0.25	0.00	1.06	1.83	0.00	0.46	0.55	0.00	1.41	0.00	0.42	0.26
13	E2_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.05	0.00	0.00	0.00	0.00	0.00
14	ER2a	ExonRegion	0	39.07	27.32	26.92	0.00	8.32	64.47	16.29	21.47	9.29	71.32	26.83	49.43	37.18	69.72	8.27	88.66	62.47	111.06	15.79	112.68	61.85	92.00	88.77	17.55	36.45	24.22	32.30	26.75	75.25
15	E2a_E3a	KnownJunction	0	48.13	35.10	16.42	0.00	5.75	53.29	19.91	31.20	13.22	60.36	56.28	67.11	52.26	89.25	0.00	80.48	111.24	90.54	8.09	121.73	40.19	69.47	95.25	21.71	41.67	20.30	79.52	50.95	113.20
16	I2_AR2	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.00	4.34	0.31	0.00	1.12	0.67	1.19	1.24	0.50	1.40	0.00	0.00	3.01	0.00	0.00	0.00	1.21	0.00	0.00	2.15	0.00	0.00	0.00	0.00	0.00
17	I2_AR3	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.00	5.04	2.02	0.00	0.94	1.44	1.19	1.24	1.30	1.06	0.00	0.00	3.01	0.00	0.00	0.00	0.00	0.00	0.00	2.15	0.00	0.00	0.00	0.00	0.00
18	I2_AR4	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.00	4.12	2.02	0.00	0.00	1.44	1.19	0.00	1.30	0.91	0.00	0.00	2.43	0.00	0.00	0.00	0.00	0.00	0.00	0.61	0.00	0.00	0.00	0.00	0.00
19	E3_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	4.34	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.97	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.88
20	ER3a	ExonRegion	0	47.63	55.88	39.63	13.00	23.68	73.28	35.06	26.89	12.04	92.72	44.83	68.29	64.25	107.59	9.13	92.79	110.31	155.76	35.65	126.76	79.37	102.40	157.65	38.30	49.20	42.92	46.60	66.69	109.73
21	E3_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.41	0.00	0.00	0.00	3.49	0.00	0.00	0.00	4.09	0.00	0.00	0.00	0.00	0.00	0.00	4.58	1.45
22	E3a_E4a	KnownJunction	0	0.00	0.00	3.74	0.00	0.00	5.60	0.00	0.00	0.00	0.00	0.00	0.00	2.96	5.38	0.00	0.00	5.06	18.49	0.00	3.89	5.94	4.28	1.82	0.00	3.22	0.00	2.53	0.00	20.80
23	E3a_E5a	KnownJunction	0	89.19	82.31	60.99	7.76	26.53	103.17	15.51	18.46	20.52	59.04	36.51	63.76	45.86	108.10	32.69	90.80	88.35	181.99	8.09	181.28	83.83	152.37	124.21	48.93	60.69	46.09	31.81	36.30	86.92
24	E3a_E6a	NovelJunction	0	5.66	3.49	1.35	0.00	14.00	1.96	0.00	0.00	0.00	3.60	0.00	0.00	2.99	0.89	0.00	10.86	6.05	4.62	8.09	10.83	7.38	2.04	8.77	0.00	0.00	0.00	2.29	0.00	9.77
25	I3	Intron	0	2.83	0.44	0.41	0.44	0.07	1.18	0.62	0.54	0.93	2.11	0.69	0.88	0.22	0.74	1.05	1.22	2.73	2.23	1.47	3.13	3.33	0.42	0.42	0.20	0.39	0.24	0.14	0.68	0.54
26	I3_AR1	ActiveIntronRegion	0	4.01	0.00	0.81	0.00	0.00	0.64	0.73	0.67	0.85	2.36	0.57	1.26	0.63	1.49	1.32	1.20	2.57	1.92	1.16	4.31	3.22	0.69	0.00	0.00	0.17	0.38	0.00	1.76	1.13
27	I3_AR2	ActiveIntronRegion	0	2.73	0.69	0.00	0.00	0.00	0.92	0.24	1.76	0.24	1.38	1.59	0.73	0.00	0.58	0.49	1.43	3.82	1.52	1.70	2.42	2.85	0.25	0.58	0.00	0.61	0.33	0.39	0.99	0.36
28	I3_AR3	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.00	2.75	2.02	0.00	0.00	0.00	0.00	1.24	0.00	0.00	0.00	5.06	2.00	2.73	0.00	1.87	1.43	1.80	0.00	0.00	0.00	0.00	0.00	3.26	0.00
29	I3_SR2	SilentIntronRegion	0	2.79	0.60	0.93	0.00	0.45	1.38	0.70	0.17	0.62	2.41	0.55	0.37	0.00	1.14	0.00	0.99	2.36	3.48	2.67	3.35	2.81	0.93	0.17	0.20	0.27	0.58	0.34	0.61	0.00
30	E4a_E5a	KnownJunction	0	0.00	0.00	6.83	0.00	0.00	7.25	0.00	1.94	0.00	8.11	1.39	1.54	1.62	3.30	0.00	0.00	4.95	10.02	0.00	0.00	2.05	0.00	4.68	2.57	0.00	0.00	2.53	0.00	11.09
31	ER4a	ExonRegion	0	0.48	0.00	7.56	0.00	0.37	8.35	0.45	0.55	0.00	5.61	0.71	1.42	3.85	7.22	0.83	0.37	7.49	13.44	0.00	2.39	4.81	3.74	4.02	1.59	1.22	0.00	3.32	0.00	21.13
32	I4	Intron	0	4.42	5.70	1.38	0.66	0.83	3.95	1.71	1.56	3.53	4.98	2.30	1.83	1.39	4.81	14.41	8.47	9.00	7.75	2.79	8.70	5.14	0.75	0.80	3.37	4.18	1.97	0.84	2.15	4.00
33	I4_SR1	SilentIntronRegion	0	2.20	0.66	0.32	0.00	0.31	1.10	0.43	0.59	0.66	1.85	0.72	0.41	0.29	0.65	0.42	1.99	1.88	3.08	1.66	3.21	2.17	0.23	0.40	0.15	0.32	0.00	0.76	0.35	0.26
34	I4_AR1	ActiveIntronRegion	0	5.83	8.93	1.23	0.51	1.11	5.50	2.90	2.54	4.79	6.46	1.43	2.26	2.63	6.61	27.61	10.21	12.98	9.50	3.99	14.83	7.08	1.90	0.39	5.86	6.29	3.76	0.26	1.72	6.58
35	I4_SR2	SilentIntronRegion	0	4.51	7.97	2.63	1.74	1.54	6.18	2.44	1.39	6.92	6.62	5.12	2.09	1.29	7.29	26.67	15.87	12.95	12.73	4.42	11.47	7.30	0.77	1.36	5.35	6.88	3.11	2.11	2.61	5.51
36	I4_AR2	ActiveIntronRegion	0	7.56	11.51	2.30	1.16	0.71	6.77	2.83	3.37	5.37	8.70	4.02	4.28	2.91	9.38	21.08	12.34	15.81	11.44	2.67	12.65	7.81	0.53	1.37	5.75	8.00	3.52	0.00	6.57	7.07
37	I4_SR3	SilentIntronRegion	0	8.20	8.61	2.57	0.47	1.33	3.82	1.48	1.51	2.31	7.48	1.32	3.71	2.03	8.42	7.61	12.22	16.41	7.47	0.90	7.76	5.30	1.36	1.60	5.14	5.46	2.08	0.50	3.92	9.97
38	E5_Aa	NovelBoundary	0	3.01	18.23	3.01	0.00	0.00	3.72	8.64	4.73	1.55	13.42	1.61	5.51	0.00	6.38	9.97	13.23	15.55	13.87	8.09	22.00	3.37	3.79	2.27	16.39	5.30	12.06	0.00	2.29	7.06
39	ER5a	ExonRegion	0	69.42	63.98	57.96	15.26	19.10	78.15	19.05	31.72	18.91	67.32	32.09	53.17	48.52	104.66	21.60	91.63	74.76	130.46	20.11	120.99	54.61	103.26	77.86	37.82	52.10	29.40	25.21	36.35	64.14
40	E5_Da	NovelBoundary	0	0.00	16.19	4.19	0.00	0.00	1.53	2.40	7.27	14.19	8.51	6.04	1.33	0.00	6.80	17.14	17.21	10.98	10.02	24.28	15.46	9.59	19.35	0.00	8.25	13.53	6.14	6.71	7.50	13.87
41	E5a_E6a	KnownJunction	0	41.76	22.59	46.02	9.49	23.73	74.51	11.67	35.73	13.76	81.97	41.98	54.85	61.81	93.15	9.97	107.79	117.88	100.18	40.46	91.55	64.50	69.86	95.74	29.49	33.15	38.45	18.74	51.54	66.75
42	E5a_E7a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.16	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.93	2.19	0.00	0.00	0.00	0.00	0.00	0.00	0.00
43	E5a_E8a	KnownJunction	0	0.00	0.00	6.08	0.00	0.00	3.38	0.00	0.00	0.00	2.00	0.00	0.00	0.00	5.38	0.00	0.00	2.39	0.00	0.00	0.00	0.00	2.48	0.00	3.05	0.00	0.00	0.00	0.00	0.00
44	I5	Intron	0	6.99	8.40	1.81	0.44	0.42	5.54	1.91	1.75	3.66	6.45	2.65	2.96	1.70	4.71	10.82	9.23	8.92	12.11	4.47	12.78	7.36	2.06	0.97	2.93	5.01	2.60	1.16	3.35	6.26
45	I5_SR1	SilentIntronRegion	0	6.99	8.40	1.81	0.44	0.42	5.54	1.91	1.75	3.66	6.45	2.65	2.96	1.70	4.71	10.82	9.23	8.93	12.12	4.48	12.79	7.36	2.06	0.97	2.94	5.01	2.60	1.16	3.36	6.26
46	E6_Aa	NovelBoundary	0	0.00	0.00	1.27	0.00	0.00	10.40	0.00	4.53	1.61	13.38	1.27	0.00	1.59	5.10	0.00	6.43	11.12	9.25	0.00	7.36	9.71	0.00	2.46	0.00	8.83	10.94	0.00	0.00	7.40
47	ER6a	ExonRegion	0	62.15	62.48	53.87	22.55	30.52	75.16	23.15	28.03	17.03	99.67	34.70	68.04	65.31	103.50	28.59	96.27	116.23	191.08	30.29	117.83	70.02	78.59	148.97	36.31	55.81	50.45	42.88	86.79	89.92
48	E6_Da	NovelBoundary	0	2.77	0.00	3.21	0.00	0.00	5.26	4.35	4.48	10.38	10.03	0.00	1.63	1.53	2.13	0.00	0.00	17.02	4.62	0.00	8.27	3.93	0.00	2.31	0.00	8.79	3.82	0.00	8.09	3.83
49	E6a_E7a	KnownJunction	0	31.03	20.46	33.68	0.00	25.20	83.41	20.48	22.15	14.43	68.15	37.39	63.85	51.40	72.39	19.73	80.71	84.54	107.88	8.09	53.01	61.13	36.75	94.81	28.53	40.88	37.03	26.24	79.35	75.57
50	I6	Intron	0	3.99	7.56	0.27	2.29	0.26	3.94	1.29	1.56	3.60	4.07	0.89	1.84	1.51	4.71	14.70	8.24	6.42	13.88	1.19	4.37	7.58	0.48	0.48	2.06	4.10	5.51	0.58	3.38	4.55
51	I6_SR1	SilentIntronRegion	0	3.99	7.57	0.27	2.29	0.26	3.95	1.29	1.57	3.61	4.07	0.89	1.84	1.52	4.72	14.73	8.25	6.44	13.91	1.19	4.38	7.59	0.48	0.48	2.06	4.11	5.52	0.59	3.38	4.56
52	E7_Aa	NovelBoundary	0	4.90	4.27	1.20	0.00	0.00	1.57	0.00	0.00	9.07	1.96	1.20	1.87	0.00	3.06	18.34	6.35	15.80	9.12	16.18	3.89	5.17	0.00	4.73	6.04	6.59	9.91	0.00	3.95	12.02
53	ER7a	ExonRegion	0	41.15	42.14	78.97	18.22	19.56	56.62	16.31	31.33	15.94	70.67	25.83	54.62	49.36	69.74	28.64	58.24	86.63	155.64	23.04	84.74	52.30	49.53	86.97	29.40	37.78	41.75	28.20	60.78	72.95
54	E7_Da	NovelBoundary	0	2.24	3.88	5.31	0.00	6.04	1.42	0.00	0.00	1.37	4.07	0.00	4.25	3.79	4.54	44.25	10.40	8.55	13.87	0.00	3.39	10.95	0.00	2.46	11.96	8.98	4.38	0.00	14.56	11.29
55	E7a_E8a	KnownJunction	0	42.76	47.51	118.55	10.14	35.52	46.81	17.91	38.82	17.78	97.95	38.44	54.67	50.89	67.18	26.91	37.10	92.09	158.23	16.18	65.42	37.38	44.92	114.01	15.43	33.68	25.23	65.20	93.05	65.50
56	I7	Intron	0	5.71	10.69	0.21	0.91	0.00	3.14	1.53	1.17	6.12	3.85	1.51	1.65	3.78	7.52	14.02	14.44	7.95	22.28	2.84	5.15	6.51	2.97	0.23	3.00	7.80	9.18	2.09	2.69	6.28
57	I7_SR1	SilentIntronRegion	0	6.69	10.77	0.26	1.12	0.00	3.86	1.89	1.44	7.52	4.73	1.67	2.02	4.44	9.10	15.65	17.75	9.55	24.69	2.99	5.90	7.56	3.66	0.28	3.69	8.69	10.05	2.57	3.05	7.72
58	I7_AR1	ActiveIntronRegion	0	1.50	10.62	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.83	0.00	0.91	0.63	7.06	0.00	1.04	12.11	2.23	1.93	1.99	0.00	0.00	0.00	3.99	5.49	0.00	1.14	0.00
59	E8_Aa	NovelBoundary	0	26.96	9.50	0.00	0.00	0.00	3.91	0.00	11.60	2.95	10.63	0.00	1.78	6.50	12.39	17.14	3.21	20.24	27.74	0.00	13.98	7.22	8.70	0.00	14.06	9.02	3.35	0.00	4.09	11.72
60	ER8a	ExonRegion	0	48.35	86.34	99.16	12.06	27.19	75.66	26.02	30.02	25.89	120.40	60.44	79.16	75.30	95.95	38.52	65.12	144.03	185.79	51.37	95.91	66.97	47.60	142.82	27.65	63.45	72.07	71.79	115.38	140.40
61	E8_Da	NovelBoundary	0	8.02	0.00	1.22	0.00	0.00	0.00	0.00	12.39	3.93	1.96	1.36	0.00	4.78	6.69	16.74	0.00	27.12	46.36	0.00	0.00	3.69	2.48	4.24	5.62	21.75	22.10	4.72	5.62	10.14
62	E8a_E9a	KnownJunction	0	32.09	149.01	59.50	0.00	40.23	166.82	20.88	32.40	56.12	150.28	54.70	66.93	78.62	89.45	9.17	78.56	147.26	224.11	48.33	78.23	133.97	35.59	131.89	22.31	79.14	80.64	28.77	85.86	189.83
63	I8	Intron	0	10.30	5.78	1.56	0.00	0.00	4.59	0.27	1.72	3.59	3.86	1.75	1.15	3.47	8.75	9.59	10.08	8.97	21.90	4.27	8.05	4.95	1.68	0.24	3.45	8.59	2.94	1.96	3.70	7.95
64	I8_AR1	ActiveIntronRegion	0	11.61	6.34	1.89	0.00	0.00	7.13	0.45	1.25	4.55	3.58	1.61	1.53	4.98	10.40	13.08	7.68	11.79	24.63	5.05	9.43	6.44	2.03	0.41	4.85	11.29	1.06	3.31	3.31	7.39
65	I8_SR1	SilentIntronRegion	0	8.50	5.03	1.11	0.00	0.00	0.91	0.00	2.44	2.23	4.30	1.97	0.61	1.29	6.45	4.58	13.74	4.94	18.18	3.17	6.13	2.83	1.19	0.00	1.41	4.73	5.73	0.00	4.31	8.86
66	E9_Aa	NovelBoundary	0	10.56	4.85	1.02	0.00	0.00	3.91	0.00	2.54	5.73	7.43	5.16	2.98	5.10	7.27	9.97	19.66	12.11	13.87	0.00	14.72	10.83	0.00	4.43	2.87	3.64	6.09	0.00	1.93	3.33
67	ER9a	ExonRegion	0	35.95	84.60	66.29	14.89	24.51	66.63	16.59	22.57	27.47	71.83	45.72	42.36	44.65	79.83	31.38	53.70	89.22	146.00	46.64	70.84	59.12	36.03	77.25	42.61	64.25	41.17	48.47	60.78	81.70
68	IG16	Intergenic	0	33.55	49.45	45.74	9.58	25.58	52.18	13.71	16.28	35.23	56.91	38.19	56.69	37.99	68.43	23.84	68.10	73.82	119.92	31.50	53.64	48.75	24.64	70.65	54.13	54.56	33.44	65.50	46.33	61.53
69	IG16_AR2	ActiveIntergenicRegion	0	46.59	69.75	67.18	13.99	38.16	75.33	19.79	23.76	52.20	83.43	56.32	83.89	55.65	95.85	33.87	94.90	105.67	160.99	45.24	77.99	69.46	36.33	105.69	80.08	79.98	47.42	98.12	66.41	90.55
70	IG16_SR2	SilentIntergenicRegion	0	8.63	9.53	2.68	1.07	0.48	5.78	2.23	1.64	2.04	4.44	0.90	2.57	3.05	14.60	5.42	16.22	10.16	45.94	4.12	6.88	7.37	1.75	0.48	2.59	3.33	6.05	0.36	6.81	2.78
71	IG16_AR1	ActiveIntergenicRegion	0	8.38	10.24	4.59	0.00	0.00	7.96	2.72	1.33	1.17	4.38	3.06	2.79	4.28	17.87	1.45	13.11	11.97	39.94	2.83	5.34	7.85	2.03	0.93	2.26	3.79	4.88	0.36	5.37	2.35
72	IG16_SR1	SilentIntergenicRegion	0	5.53	7.16	2.03	0.88	0.60	4.75	0.00	0.98	0.49	2.93	2.53	1.70	1.26	9.73	3.27	13.30	8.99	26.51	4.70	2.32	6.99	0.22	0.49	1.85	4.21	5.18	0.11	5.92	5.14