Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	C11orf24	Gene	0	290.90	59.43	210.76	220.81	179.15	98.88	80.26	60.19	98.26	115.12	94.92	110.62	151.58	174.51	101.73	99.29	183.58	112.87	67.56	49.82	116.19	105.66	115.87	114.00	128.74	82.49	96.48	127.40	76.88
2	304271	Transcript	0	419.82	53.42	201.87	247.74	246.96	116.28	102.34	69.31	105.85	135.01	137.26	114.21	154.94	201.54	122.46	117.91	150.92	110.84	85.99	60.21	137.82	137.08	141.18	135.98	153.96	84.21	124.55	116.03	66.64
3	IG9_AR1	ActiveIntergenicRegion	0	0.00	0.00	4.49	21.94	4.98	0.00	2.02	0.00	0.00	0.00	1.19	0.00	2.60	0.00	0.00	0.00	1.00	5.46	0.00	0.00	1.43	3.61	0.00	0.00	0.00	0.00	0.00	0.00	4.03
4	ER1a	ExonRegion	0	258.86	10.69	86.16	175.00	223.31	52.36	57.48	19.72	72.25	49.08	27.47	31.72	79.60	38.43	56.78	71.84	39.56	47.92	18.10	9.73	71.01	62.34	68.39	21.38	42.65	53.39	52.96	41.43	33.56
5	E1_Da	NovelBoundary	0	11.44	0.00	3.81	19.63	7.37	3.26	4.92	0.00	2.80	0.00	3.04	0.00	1.62	2.22	0.00	0.00	3.67	0.00	0.00	3.47	3.77	1.94	4.58	5.92	0.00	0.00	2.53	0.00	0.00
6	E1a_E2a	KnownJunction	0	77.09	8.53	62.69	83.47	50.55	16.11	11.21	10.90	30.60	17.10	24.55	33.70	39.17	19.85	17.54	42.38	22.08	9.25	0.00	11.00	31.93	24.07	21.08	14.59	20.72	1.89	42.29	28.94	9.77
7	I1	Intron	0	11.14	0.58	1.66	2.52	2.73	3.19	1.17	0.46	1.37	2.69	1.48	0.97	0.66	3.59	2.32	2.02	6.27	2.56	3.04	0.45	1.92	0.07	0.15	0.85	2.78	0.42	0.72	1.18	0.30
8	I1_SR1	SilentIntronRegion	0	11.56	0.61	1.73	2.63	2.84	3.32	1.22	0.48	1.43	2.80	1.54	1.01	0.68	3.72	2.42	2.11	6.54	2.64	3.17	0.47	1.98	0.08	0.16	0.88	2.90	0.44	0.75	1.20	0.32
9	E2_Aa	NovelBoundary	0	20.29	0.00	4.26	0.00	7.22	3.45	0.00	0.00	4.99	5.95	4.56	0.00	0.00	8.69	16.34	6.58	13.84	0.00	0.00	0.00	3.81	0.00	2.51	0.00	6.90	0.00	0.00	2.20	0.00
10	ER2a	ExonRegion	0	512.31	41.03	92.05	119.62	200.32	122.10	110.59	60.68	140.07	124.32	116.43	99.76	172.95	175.55	140.84	113.40	125.23	116.11	77.33	57.28	157.63	131.20	131.08	109.33	122.24	86.70	99.83	91.64	67.28
11	E2_Da	NovelBoundary	0	5.37	0.00	2.44	0.00	0.00	1.84	0.00	0.00	0.00	7.03	0.00	0.00	1.62	1.35	0.00	0.00	3.13	4.62	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.02	0.00	0.00	0.00
12	E2a_E3a	KnownJunction	0	511.52	54.49	188.88	131.57	291.21	120.01	104.47	89.83	95.41	172.92	209.17	141.89	152.95	273.19	123.18	142.82	186.38	111.48	97.11	65.58	150.37	187.81	177.50	157.14	152.00	109.86	257.43	108.64	64.21
13	E2a_E4a	NovelJunction	0	10.91	0.00	3.76	0.00	11.49	1.80	0.00	0.00	4.90	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.04	0.00	0.00	0.00	0.00	0.00	2.27	0.00	1.86	0.00	0.00	8.49	1.42
14	I2	Intron	0	15.91	0.72	1.39	1.02	0.99	2.20	0.29	1.27	5.16	1.75	1.20	1.28	1.95	2.18	3.11	1.87	2.39	2.70	1.55	0.56	1.76	0.98	0.40	0.70	2.46	0.38	0.67	1.15	0.15
15	I2_AR1	ActiveIntronRegion	0	11.05	0.00	0.96	2.05	1.40	1.18	0.58	0.53	2.57	1.65	1.02	0.00	1.30	1.03	1.57	0.71	0.43	1.66	0.00	0.00	0.82	0.00	0.00	0.62	0.41	0.00	0.00	0.00	0.00
16	I2_AR2	ActiveIntronRegion	0	26.79	0.00	4.54	0.00	4.37	2.40	0.90	2.55	7.56	1.15	2.95	1.48	2.59	2.11	0.00	1.98	1.79	4.02	1.43	1.23	3.15	0.24	2.43	0.96	3.84	0.70	0.00	1.23	0.00
17	I2_SR2	SilentIntronRegion	0	25.72	0.00	3.05	0.00	3.95	2.95	0.00	1.34	4.74	0.76	2.00	3.83	0.29	4.92	1.60	0.44	3.72	10.66	1.36	0.00	1.22	2.09	0.00	0.24	1.16	0.00	0.00	0.83	0.00
18	I2_AR3	ActiveIntronRegion	0	82.11	0.00	3.15	1.76	1.20	1.84	1.48	9.03	46.11	3.03	7.70	5.58	19.32	4.34	18.90	1.22	4.48	5.04	1.15	0.68	6.30	6.31	0.89	0.98	19.28	0.00	4.49	1.47	0.00
19	I2_SR3	SilentIntronRegion	0	8.38	0.92	1.00	0.93	0.64	2.29	0.11	0.43	0.92	1.69	0.40	0.85	0.19	1.97	1.80	2.08	2.34	2.21	1.75	0.57	1.30	0.52	0.28	0.67	0.82	0.45	0.38	1.23	0.19
20	E3_Aa	NovelBoundary	0	7.79	0.00	1.05	0.00	0.00	0.00	0.00	0.00	0.00	1.60	0.00	0.00	0.00	3.12	7.57	3.82	1.33	0.00	0.00	0.00	4.09	0.00	0.00	0.00	1.74	0.00	0.00	2.02	0.00
21	ER3a	ExonRegion	0	596.67	94.42	296.50	375.41	344.41	192.63	150.47	110.08	120.20	199.13	182.25	158.84	187.15	329.33	151.15	166.93	196.09	171.41	144.72	97.51	207.12	201.26	217.80	232.46	249.09	109.75	167.50	150.76	93.29
22	E3_Da	NovelBoundary	0	56.86	4.27	11.73	9.27	18.13	3.18	10.47	0.00	9.53	9.15	4.75	8.16	7.96	20.67	0.00	13.23	27.37	33.13	0.00	6.45	20.02	11.91	13.35	21.89	11.02	12.57	7.21	4.58	2.05
23	E3a_E4a	KnownJunction	0	750.06	102.48	459.21	628.53	464.81	220.88	211.41	135.61	189.41	271.79	312.23	219.69	301.18	404.71	272.27	195.45	284.36	207.80	202.31	133.06	241.62	257.04	265.41	306.97	366.92	146.29	159.63	253.64	118.12
24	I3	Intron	0	71.70	7.41	10.26	8.04	17.72	8.71	5.05	3.52	9.33	10.19	4.79	8.50	2.56	20.84	14.26	21.90	29.84	16.67	6.53	5.35	9.98	4.28	2.15	12.49	12.45	3.63	2.78	4.95	2.03
25	I3_SR1	SilentIntronRegion	0	48.43	0.00	9.59	3.47	15.87	4.85	11.65	6.80	3.83	14.80	7.18	1.43	2.00	16.70	0.76	23.16	31.46	7.17	1.53	2.24	9.19	9.38	4.26	13.45	3.27	4.77	5.28	14.75	1.87
26	I3_AR1	ActiveIntronRegion	0	66.45	0.00	14.59	7.31	29.89	5.50	15.12	1.84	8.99	21.42	8.13	4.95	5.20	28.42	5.60	25.31	47.08	11.83	9.05	0.00	18.54	12.02	5.73	20.79	10.01	3.14	8.85	9.78	1.34
27	I3_SR2	SilentIntronRegion	0	64.83	5.26	10.52	6.12	23.46	4.51	4.40	2.88	9.92	9.08	4.21	7.15	2.23	21.95	14.63	17.57	34.94	17.24	4.74	5.59	5.99	8.01	2.93	12.84	9.12	3.82	2.93	4.09	1.40
28	I3_AR2	ActiveIntronRegion	0	68.37	17.46	11.36	8.85	11.85	11.85	2.91	4.60	14.42	11.63	3.63	11.85	2.15	23.63	24.57	32.33	36.06	25.97	8.29	7.55	13.96	2.99	2.01	16.86	18.03	4.50	3.46	1.95	3.25
29	I3_SR3	SilentIntronRegion	0	79.61	6.30	11.27	0.00	27.65	7.24	4.53	4.96	6.56	13.20	8.31	10.30	2.65	23.36	10.97	22.78	35.14	16.60	7.57	2.93	12.02	1.21	0.85	10.32	17.74	0.38	2.69	3.46	2.74
30	I3_AR3	ActiveIntronRegion	0	84.71	6.98	9.56	12.10	13.63	12.59	5.17	2.76	8.30	8.98	4.73	9.70	3.16	19.18	13.18	21.13	21.02	14.36	8.40	5.43	11.73	0.68	1.20	10.39	14.38	3.47	1.72	5.21	2.02
31	E4_Aa	NovelBoundary	0	148.88	16.97	10.29	9.06	12.97	24.17	5.03	0.00	9.11	14.10	4.33	9.13	3.03	26.26	0.00	44.83	41.24	33.13	8.09	3.14	13.84	12.79	2.17	16.39	25.50	3.35	3.88	8.40	1.25
32	ER4a	ExonRegion	0	232.23	62.34	227.58	220.57	154.14	89.86	70.78	58.32	92.98	110.72	88.74	113.89	151.57	169.72	95.48	92.54	202.72	111.94	62.33	47.28	105.07	95.84	107.03	109.97	124.12	81.61	92.19	137.18	80.24