Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	AC091196.1	Gene	0	86.67	51.64	75.74	50.17	53.21	57.36	33.74	75.30	77.02	64.30	41.09	71.54	111.73	71.40	69.77	75.23	106.15	121.87	37.96	95.07	36.40	111.93	68.61	128.10	56.05	89.75	25.94	51.87	87.19
2	399693	Transcript	0	0.00	0.00	2.00	3.32	0.00	2.22	0.02	1.83	0.26	9.86	0.78	0.00	0.31	0.00	1.07	0.00	0.88	0.61	0.00	0.00	0.60	0.02	5.27	2.09	0.93	0.71	0.00	0.00	0.46
3	329957	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.09	0.19	0.00	0.00	0.00	0.07	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
4	427202	Transcript	0	0.00	3.28	0.20	0.00	0.00	0.25	0.18	0.33	0.00	1.97	0.00	0.11	0.94	0.00	0.00	0.00	0.18	0.25	0.00	0.00	0.13	0.16	0.33	0.78	0.39	0.71	0.00	0.00	0.00
5	ER1a	ExonRegion	0	0.00	0.00	1.70	6.65	0.00	1.32	0.04	1.12	0.52	10.64	0.00	0.00	0.63	0.00	2.14	0.00	0.36	1.22	0.00	0.00	1.19	0.03	6.16	1.84	0.00	1.43	0.00	0.00	0.93
6	E1a_E3b	KnownJunction	0	0.00	0.00	2.29	0.00	0.00	3.11	0.00	2.54	0.00	9.07	1.55	0.00	0.00	0.00	0.00	0.00	1.40	0.00	0.00	0.00	0.00	0.00	4.38	2.33	1.86	0.00	0.00	0.00	0.00
7	ER2a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.09	0.19	0.00	0.00	0.00	0.07	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
8	ER3a	ExonRegion	0	0.00	3.28	0.20	0.00	0.00	0.25	0.18	0.33	0.00	1.97	0.00	0.11	0.94	0.00	0.00	0.00	0.18	0.25	0.00	0.00	0.13	0.16	0.33	0.78	0.39	0.71	0.00	0.00	0.00
9	ER3b	ExonRegion	0	61.58	20.92	24.43	17.69	9.75	59.20	24.64	49.40	47.08	52.26	25.51	45.31	82.08	46.52	33.15	82.52	60.77	113.36	31.60	92.70	28.37	114.55	52.43	71.58	32.55	91.44	12.82	36.59	78.19
10	E3_Da	NovelBoundary	0	11.09	3.49	0.00	0.00	0.00	3.64	8.01	0.00	3.78	3.95	0.00	1.69	0.00	3.23	7.77	15.76	12.79	18.49	0.00	4.13	0.00	4.13	0.00	0.00	0.00	0.00	0.00	0.00	3.70
11	E3a_E4a	KnownJunction	0	75.38	43.92	48.68	70.75	14.15	165.90	98.30	69.77	136.27	211.19	79.43	101.68	176.16	77.61	138.93	263.00	171.79	313.88	105.20	59.30	95.90	100.49	181.04	124.72	94.79	260.70	15.90	134.48	204.65
12	I3	Intron	0	9.43	2.50	3.46	0.00	2.53	0.71	1.57	2.38	2.18	2.24	0.00	1.76	1.85	2.94	4.78	4.50	10.05	6.25	1.65	4.08	1.48	1.40	0.00	3.90	0.74	0.41	0.00	1.27	0.87
13	I3_AR1	ActiveIntronRegion	0	9.52	2.53	3.50	0.00	2.55	0.72	1.58	2.41	2.20	2.27	0.00	1.78	1.87	2.97	4.83	4.54	10.15	6.31	1.67	4.12	1.49	1.41	0.00	3.94	0.75	0.41	0.00	1.28	0.87
14	E4_Aa	NovelBoundary	0	34.62	0.00	6.73	0.00	12.82	17.04	13.22	2.04	5.09	8.07	7.62	4.37	5.29	8.57	9.97	20.35	26.76	27.74	8.09	7.53	11.91	6.56	0.00	10.65	1.82	9.23	0.00	1.89	1.75
15	ER4a	ExonRegion	0	120.51	69.61	85.77	50.49	67.36	102.81	61.16	118.36	90.80	104.07	86.42	143.60	177.56	114.31	60.77	119.35	182.03	171.91	44.58	126.48	45.74	147.13	129.79	202.18	90.26	153.79	69.25	126.31	164.54
16	E4_Da	NovelBoundary	0	4.78	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.87	0.00	0.00	0.00	1.13	0.00	0.00	2.34	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.25	0.00
17	E4a_E5a	KnownJunction	0	139.32	45.86	160.88	93.61	183.62	96.72	31.75	93.16	91.75	78.01	55.46	146.26	146.80	109.96	94.88	114.52	229.98	198.68	16.18	144.31	45.32	163.01	110.52	205.94	54.18	105.05	63.91	69.10	163.15
18	I4	Intron	0	2.99	1.08	1.26	0.16	1.03	2.75	0.31	1.32	1.65	3.10	1.07	1.28	0.18	1.40	1.53	2.89	4.48	3.24	0.39	0.68	0.77	0.36	0.32	1.69	0.82	1.67	0.16	0.92	0.53
19	I4_SR1	SilentIntronRegion	0	2.57	0.45	1.33	0.00	0.39	1.94	0.48	1.54	1.20	3.81	0.86	1.08	0.00	1.21	0.55	3.04	3.69	1.04	0.13	0.33	0.29	0.14	0.36	0.69	0.22	0.58	0.00	0.75	0.21
20	I4_AR1	ActiveIntronRegion	0	0.86	2.29	2.36	0.00	0.00	7.16	0.00	1.75	1.38	7.17	1.19	1.54	0.00	3.75	0.37	4.22	2.97	2.40	0.64	1.11	1.15	0.58	0.36	0.00	1.74	1.48	0.00	0.51	0.00
21	I4_AR2	ActiveIntronRegion	0	0.00	0.00	1.12	0.00	0.00	5.67	0.00	1.84	2.25	5.23	0.00	2.47	0.00	1.81	0.00	2.53	2.25	3.07	0.00	0.00	0.00	1.80	3.62	0.00	0.00	0.39	0.00	0.00	0.00
22	I4_AR3	ActiveIntronRegion	0	0.00	0.00	0.24	0.00	0.00	5.50	0.00	1.05	2.25	4.33	0.00	0.00	0.00	1.04	0.00	1.45	0.36	5.07	0.00	0.00	0.00	1.29	3.62	0.00	0.00	0.00	0.00	0.00	0.00
23	I4_AR4	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.00	3.81	0.00	0.00	0.69	4.33	0.00	0.00	0.00	0.91	0.00	0.00	0.00	2.73	0.00	0.00	0.00	0.00	0.28	0.00	0.00	0.00	0.00	0.00	0.00
24	I4_AR13	ActiveIntronRegion	0	1.95	0.00	0.51	0.00	6.32	2.78	0.00	0.00	2.69	0.88	0.72	1.48	0.00	1.27	0.00	0.75	6.63	6.76	0.00	0.00	1.30	0.00	0.00	1.96	0.87	2.64	0.00	0.49	0.00
25	I4_AR14	ActiveIntronRegion	0	3.87	0.00	1.28	0.00	2.81	4.98	0.00	1.81	4.65	2.30	0.72	0.87	0.68	1.67	0.29	3.43	7.67	4.71	0.00	1.69	1.97	0.55	0.00	2.31	1.32	0.82	0.00	2.17	0.31
26	I4_SR4	SilentIntronRegion	0	2.23	1.83	1.33	0.00	0.29	3.78	0.73	1.38	1.83	3.35	0.72	1.04	0.16	1.28	1.15	1.78	4.37	4.16	0.58	0.50	1.24	0.43	0.44	2.36	1.21	2.53	0.33	1.21	0.45
27	I4_AR15	ActiveIntronRegion	0	2.88	1.31	1.11	0.00	1.19	0.98	0.00	0.76	1.09	2.42	0.77	0.89	0.21	1.24	2.05	0.99	4.02	3.63	1.30	0.60	0.30	0.18	0.29	2.23	0.81	1.20	0.15	0.70	0.48
28	I4_SR5	SilentIntronRegion	0	7.34	1.78	1.80	0.57	1.92	2.75	0.32	2.18	2.04	3.02	3.10	3.32	0.51	1.68	6.08	6.47	8.15	6.43	0.00	1.62	1.01	0.96	0.43	3.22	1.46	4.33	0.58	1.25	2.00
29	E5_Aa	NovelBoundary	0	5.60	0.00	0.00	0.00	0.00	0.00	0.00	4.28	1.55	2.04	2.69	6.30	0.00	4.65	0.00	7.65	15.01	13.87	0.00	0.00	2.05	0.00	2.51	14.71	0.00	0.00	0.00	6.47	2.05
30	ER5a	ExonRegion	0	174.20	67.09	173.76	152.75	174.04	125.48	54.65	139.22	141.88	122.74	81.67	144.00	205.19	151.03	93.60	125.83	239.31	194.69	64.30	165.20	74.06	200.19	119.29	273.04	115.83	169.97	39.94	106.17	164.41
31	E5a_E6a	KnownJunction	0	164.81	96.76	60.14	62.34	137.06	119.67	43.54	128.45	114.38	116.32	75.35	122.59	178.07	160.77	111.42	161.18	171.57	219.10	40.46	171.02	70.63	226.22	117.81	245.24	132.03	142.73	51.78	69.91	128.09
32	E6_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.81	0.00	0.00	0.00	0.00	0.00
33	I5_AR1	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.15	0.00	0.00	0.00	0.00	0.00
34	ER6a	ExonRegion	0	165.05	112.34	58.35	58.50	137.49	119.60	49.18	132.93	98.20	120.41	78.79	124.18	173.29	158.19	110.89	140.71	171.90	195.41	50.69	160.77	59.05	207.68	113.20	239.21	128.35	139.88	58.61	64.22	123.21
35	E6_Da	KnownBoundary	0	206.63	155.31	55.71	17.04	147.67	132.94	61.11	180.50	134.72	116.48	133.91	120.90	160.85	138.24	159.06	126.53	158.80	207.54	64.74	200.88	56.03	187.61	125.88	318.28	134.08	134.54	54.22	89.10	136.74
36	ER6b	ExonRegion	0	200.17	128.43	56.68	37.98	143.02	131.13	54.04	159.58	111.95	121.32	106.34	122.73	177.80	152.41	128.45	126.62	161.57	202.22	57.96	177.89	56.14	212.14	126.58	273.13	139.24	146.67	55.71	74.56	125.69
37	ER6c	ExonRegion	0	84.34	57.22	81.50	48.89	47.68	49.23	33.84	74.54	81.58	60.60	37.57	67.69	111.25	68.06	80.71	71.80	101.85	122.89	39.52	93.66	36.15	108.68	65.66	124.07	53.73	83.34	24.63	46.74	81.97
38	IG50_AR3	ActiveIntergenicRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	5.06	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.05	0.00	0.00	0.00	0.00	0.00
39	IG50_AR2	ActiveIntergenicRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.11	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.15	0.00	0.00	0.00	0.00	0.00