Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	TRIM68	Gene	0	45.46	35.78	64.60	84.47	45.74	56.51	31.76	40.15	32.78	54.35	53.56	46.03	47.31	71.08	56.25	31.43	91.00	75.40	38.14	58.44	41.37	49.18	52.87	56.99	45.90	77.95	32.28	64.48	54.73
2	300747	Transcript	0	51.68	30.60	63.87	80.99	34.44	61.26	27.10	44.25	18.32	48.08	45.85	41.71	40.75	77.42	34.92	38.81	77.86	74.73	42.09	60.67	36.62	49.84	59.88	44.70	42.06	75.04	26.92	62.00	48.77
3	ER1a	ExonRegion	0	18.53	6.97	25.47	73.28	49.82	15.28	6.97	6.77	4.00	14.92	8.67	12.83	8.37	22.07	6.06	19.88	31.41	30.99	5.62	21.53	13.23	35.39	29.97	11.06	13.32	25.52	6.23	24.08	11.86
4	E1a_E2a	KnownJunction	0	11.56	16.68	8.47	0.00	0.00	18.99	7.78	15.93	8.16	12.50	7.91	11.69	15.09	40.90	8.37	27.85	28.05	60.88	16.18	33.58	18.25	42.59	13.99	26.26	28.75	18.84	0.00	9.80	5.15
5	E1a_E3a	NovelJunction	0	5.90	8.53	0.00	0.00	0.00	3.49	0.00	1.99	6.15	1.48	0.00	0.00	0.00	5.10	0.00	7.19	10.78	4.62	0.00	8.27	3.85	4.57	5.02	2.99	0.00	1.97	0.00	0.00	1.35
6	ER2a	ExonRegion	0	40.45	25.24	45.88	69.25	25.50	41.12	21.97	24.60	11.12	37.13	31.49	30.55	27.18	67.27	22.46	31.63	56.28	71.00	21.11	42.73	25.16	35.02	48.32	28.69	33.58	50.93	16.02	38.87	20.03
7	E2_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.04	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
8	E2a_E3a	KnownJunction	0	58.45	53.23	77.46	29.77	7.37	46.42	37.02	40.86	16.02	41.06	26.19	22.62	34.87	83.95	34.68	63.57	79.39	78.60	64.74	56.24	21.06	46.33	42.21	33.50	48.83	71.28	11.83	63.35	41.04
9	E2a_E4a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	1.96	0.00	2.54	1.67	0.00	0.00	1.27	0.00	3.08	0.00	0.00	5.69	0.00	0.00	7.61	0.00	0.00	4.43	2.51	1.82	0.00	0.00	0.00	0.00
10	E3_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.04	0.00	0.00	0.00	1.04	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
11	ER3a	ExonRegion	0	54.73	36.65	69.24	81.73	22.05	60.18	24.59	35.54	20.56	53.77	48.00	40.53	30.64	91.20	30.45	53.44	73.01	71.38	38.99	61.92	32.21	54.36	61.09	49.92	54.72	83.54	28.79	70.19	45.96
12	E3_Da	NovelBoundary	0	2.24	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.04	0.00	3.49	0.00	1.37	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.48	0.00	0.00	0.00	0.00	0.00	0.00	0.00
13	E3a_E4a	KnownJunction	1	79.57	42.37	79.93	70.10	33.45	80.19	25.69	45.49	20.34	46.62	72.13	69.00	42.51	92.17	16.14	69.31	82.70	32.36	32.37	57.48	47.93	58.00	67.47	36.61	43.68	70.81	37.22	91.03	49.85
14	E4_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	3.91	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
15	ER4a	ExonRegion	0	65.25	42.28	74.97	93.83	56.61	78.54	32.72	50.20	21.19	57.86	55.89	54.10	42.16	90.32	34.96	38.39	82.85	71.71	45.85	74.08	40.37	56.81	72.91	48.57	40.33	86.55	23.40	71.85	50.32
16	E4_Da	NovelBoundary	0	2.71	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.50	0.00	2.97	2.98	0.00	0.00	0.00	6.58	2.18	9.12	0.00	8.19	3.53	0.00	0.00	0.00	1.55	2.19	0.00	0.00	1.39
17	E4a_E5a	KnownJunction	0	69.84	11.92	47.16	90.59	13.71	67.68	25.63	60.47	19.73	59.36	46.09	39.22	34.87	67.49	58.00	35.57	67.48	75.26	48.55	58.55	30.20	58.49	68.65	40.79	43.26	88.70	29.77	58.86	40.31
18	E4a_E6a	NovelJunction	0	3.01	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
19	I4	Intron	0	5.27	0.00	1.50	0.00	0.00	1.38	0.45	0.00	1.07	1.13	0.67	1.24	0.00	1.27	2.58	2.22	2.17	3.52	0.71	1.76	0.96	0.00	0.00	0.48	0.16	0.53	0.00	0.36	1.35
20	I4_AR1	ActiveIntronRegion	0	5.30	0.00	1.50	0.00	0.00	1.39	0.45	0.00	1.07	1.14	0.67	1.25	0.00	1.27	2.59	2.23	2.18	3.53	0.72	1.77	0.96	0.00	0.00	0.48	0.16	0.53	0.00	0.37	1.35
21	E5a_E6a	KnownJunction	0	41.11	39.26	53.84	100.30	49.52	87.40	22.08	40.31	11.51	50.01	54.73	36.41	69.68	78.50	16.34	40.54	76.35	116.23	80.92	84.35	39.07	23.38	68.70	56.23	39.29	67.16	25.15	68.97	71.57
22	ER5a	ExonRegion	0	65.05	23.99	73.96	105.24	38.55	91.33	26.64	69.48	19.78	70.49	59.51	48.13	69.41	98.79	43.10	43.90	100.65	99.79	54.70	83.10	40.50	55.34	89.39	59.58	48.04	106.80	36.31	86.32	76.45
23	I5	Intron	0	15.71	2.76	5.73	4.09	3.25	8.63	2.88	4.55	3.47	3.30	2.60	6.40	0.49	15.15	6.21	4.66	16.34	12.77	4.56	5.10	5.29	0.00	0.69	5.32	2.18	4.49	0.00	4.65	1.34
24	I5_AR1	ActiveIntronRegion	0	7.50	0.00	1.53	0.00	7.70	1.12	0.00	0.00	0.77	1.18	0.00	1.01	0.00	2.14	0.00	5.75	0.64	2.73	0.00	1.41	3.50	0.00	0.00	0.49	0.97	0.64	0.00	2.07	0.24
25	I5_SR1	SilentIntronRegion	0	11.55	0.00	6.42	14.63	4.38	4.29	2.47	2.68	3.03	1.37	2.33	6.83	0.10	11.19	0.00	8.98	10.70	7.10	2.17	5.13	5.84	0.00	0.00	2.81	0.69	3.98	0.00	5.39	2.83
26	I5_AR2	ActiveIntronRegion	0	16.91	3.38	5.85	2.51	2.85	9.80	3.10	5.13	3.70	3.75	2.79	6.63	0.59	16.55	7.61	3.88	18.17	14.30	5.22	5.30	5.31	0.00	0.84	6.02	2.50	4.79	0.00	4.68	1.14
27	E6_Aa	NovelBoundary	0	7.79	0.00	2.79	0.00	6.78	5.45	0.00	2.54	3.87	1.64	0.00	6.42	0.00	10.48	0.00	10.71	18.80	23.12	8.09	6.62	5.82	0.00	2.51	0.00	1.52	0.00	0.00	2.29	0.00
28	ER6a	ExonRegion	0	75.32	24.82	88.67	123.59	49.57	83.75	43.43	67.76	25.31	61.47	54.26	59.84	57.27	107.24	58.45	30.04	109.15	88.39	54.62	91.03	56.22	68.68	74.96	70.67	52.25	105.03	47.95	62.81	71.49
29	E6_Da	NovelBoundary	0	7.90	0.00	1.10	0.00	0.00	0.00	2.46	2.39	0.00	0.00	0.00	0.00	0.00	4.12	0.00	0.00	1.06	0.00	0.00	0.00	0.00	2.19	0.00	2.75	0.00	2.15	0.00	1.71	0.00
30	E6a_E7a	KnownJunction	0	47.31	33.84	115.58	129.42	52.02	66.34	41.88	73.85	17.69	58.96	68.77	66.14	41.72	95.43	52.82	19.89	119.86	94.78	40.46	62.69	64.46	62.04	89.04	51.02	49.17	114.45	48.50	87.21	83.72
31	I6	Intron	0	3.83	0.82	0.85	1.83	0.00	1.05	0.00	0.47	0.43	0.37	0.00	0.79	0.33	2.31	0.00	0.63	1.90	0.00	1.63	0.70	1.09	0.46	0.00	0.55	0.00	0.00	0.00	0.00	0.34
32	I6_SR1	SilentIntronRegion	0	3.88	0.83	0.87	1.86	0.00	1.07	0.00	0.48	0.43	0.37	0.00	0.80	0.34	2.35	0.00	0.64	1.93	0.00	1.65	0.71	1.11	0.47	0.00	0.56	0.00	0.00	0.00	0.00	0.35
33	E7_Aa	NovelBoundary	0	2.89	0.00	1.22	0.00	0.00	0.00	0.00	0.00	0.00	0.00	6.07	0.00	0.00	0.00	0.00	0.00	1.28	0.00	0.00	0.00	1.52	2.48	0.00	2.51	0.00	0.00	0.00	1.93	0.00
34	ER7a	ExonRegion	0	44.61	40.57	69.65	85.84	49.55	59.22	35.92	44.04	42.69	60.88	62.46	51.11	56.02	71.16	72.15	30.54	105.03	80.17	42.98	61.46	47.40	51.47	51.74	68.17	51.58	85.89	38.74	72.58	66.31