Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	ARFIP2	Gene	0	226.77	75.20	158.76	205.05	189.98	111.52	196.74	311.65	101.52	113.21	99.61	119.38	165.91	116.67	129.43	86.99	124.97	116.53	109.91	168.36	65.77	177.62	166.89	112.40	113.70	89.55	91.54	98.10	102.21
2	396777	Transcript	0	0.00	0.00	0.79	4.06	3.46	0.97	1.43	0.84	0.00	1.02	0.00	0.60	0.00	0.00	3.27	1.76	0.00	2.80	0.00	16.32	2.58	2.15	0.00	0.00	0.00	2.79	1.12	0.00	4.72
3	254584	Transcript	0	7.82	3.00	8.44	1.56	9.30	10.29	7.67	15.98	4.08	6.95	1.22	10.23	4.34	1.67	12.01	4.96	4.97	6.99	2.53	4.64	2.21	8.71	4.80	4.38	1.52	3.43	3.13	3.65	4.08
4	423813	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.14	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.79	0.00	0.00
5	445086	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.54	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
6	ER1a	ExonRegion	0	0.00	0.00	0.79	4.06	3.46	0.97	1.43	0.84	0.00	1.02	0.00	0.60	0.00	0.00	3.27	1.76	0.00	2.80	0.00	16.32	2.58	2.15	0.00	0.00	0.00	2.79	1.12	0.00	4.72
7	E1_Ab	KnownBoundary	0	0.00	0.00	2.67	9.06	0.00	0.00	0.00	2.49	0.00	0.00	0.00	1.45	0.00	0.00	0.00	0.00	0.00	0.00	0.00	26.63	4.45	2.33	0.00	0.00	0.00	7.25	0.00	2.25	6.47
8	ER1b	ExonRegion	0	37.51	4.68	30.05	121.61	152.31	19.32	20.87	22.30	8.38	24.41	8.79	12.25	11.84	10.35	21.47	26.43	5.58	27.95	23.72	27.59	9.98	34.05	35.80	10.68	13.95	17.11	16.14	20.68	13.12
9	E1_Ac	KnownBoundary	0	145.05	34.13	95.55	528.66	578.29	69.71	70.77	86.44	32.46	98.47	32.05	58.64	59.84	41.57	85.91	113.29	44.23	97.86	105.20	86.50	28.88	120.91	123.42	40.20	57.96	64.54	57.85	71.04	52.16
10	ER1c	ExonRegion	0	183.45	22.34	163.88	531.72	552.45	72.74	132.76	97.49	30.29	94.66	41.51	35.37	43.74	52.90	71.34	100.91	32.84	126.12	59.91	105.58	38.49	174.26	224.99	52.06	66.52	67.03	36.68	96.25	37.77
11	E1_Da	NovelBoundary	0	3.01	0.00	2.24	0.00	0.00	3.91	0.00	0.00	0.00	1.80	1.46	0.00	0.00	0.00	0.00	0.00	0.00	4.62	0.00	0.00	0.00	0.00	0.00	0.00	1.74	0.00	0.00	0.00	0.00
12	E1a_E2a	KnownJunction	0	23.24	0.00	22.42	25.88	44.21	3.53	7.84	11.89	3.11	3.24	1.33	1.54	5.86	6.58	0.00	3.37	6.64	0.00	0.00	39.03	4.81	18.62	6.75	5.44	3.37	15.19	2.34	2.02	2.67
13	E1a_E2b	KnownJunction	0	12.98	4.27	15.55	0.00	13.12	16.88	13.45	29.56	3.41	10.39	0.00	13.64	6.34	1.35	16.74	6.43	5.81	9.50	0.00	7.11	1.60	13.81	6.70	5.44	0.00	3.43	1.94	1.93	6.97
14	E1a_E3a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	2.92	1.94	2.38	2.04	0.00	0.00	0.00	0.91	0.00	0.00	0.00	0.00	0.00	0.00	1.72	2.38	0.00	0.00	1.86	0.00	5.07	4.40	0.00
15	I1	Intron	0	20.31	5.61	6.18	4.97	6.77	9.21	2.95	3.26	5.79	6.23	5.32	4.56	1.75	12.19	4.18	15.60	14.95	16.75	6.89	4.55	4.51	3.47	1.67	5.47	6.72	2.18	1.13	7.28	2.11
16	I1_AR1	ActiveIntronRegion	0	20.37	5.62	6.20	4.99	6.79	9.24	2.96	3.27	5.80	6.25	5.33	4.57	1.75	12.23	4.19	15.64	14.99	16.80	6.91	4.57	4.52	3.48	1.68	5.49	6.74	2.19	1.13	7.30	2.12
17	E2_Aa	NovelBoundary	0	46.13	4.75	8.60	0.00	0.00	18.61	5.26	0.00	6.00	15.10	2.59	11.20	0.00	15.16	0.00	7.34	25.62	13.87	32.37	6.29	3.97	3.94	7.49	14.36	11.37	7.68	0.00	2.29	0.00
18	ER2a	ExonRegion	0	42.19	1.52	18.23	26.22	20.53	15.12	25.17	24.70	8.60	12.89	10.10	10.65	14.07	22.30	11.75	23.52	19.15	15.71	32.01	39.01	8.73	35.44	11.42	18.21	7.67	8.78	5.49	10.18	6.02
19	E2_Ab	KnownBoundary	0	55.03	8.82	17.86	40.98	12.38	29.08	33.53	43.05	16.08	22.13	15.47	17.62	21.69	33.57	25.71	39.93	36.19	47.52	48.55	48.88	7.46	51.58	15.81	28.71	6.78	3.95	12.03	16.18	10.53
20	ER2b	ExonRegion	0	218.44	37.74	37.05	61.13	39.40	83.61	93.53	225.16	47.79	72.48	37.30	62.59	86.77	89.63	80.31	84.25	62.83	118.06	75.76	169.54	36.44	157.22	82.15	90.52	65.56	36.93	28.59	38.01	50.14
21	E2_Da	NovelBoundary	1	44.65	8.63	4.09	0.00	0.00	9.98	7.32	4.68	11.51	16.74	9.27	7.95	0.00	16.35	0.00	24.94	33.25	19.26	16.18	8.27	3.57	4.28	0.00	8.97	9.96	0.00	0.00	23.72	2.71
22	E2a_E3a	KnownJunction	0	295.64	74.55	57.30	69.02	85.62	120.36	160.83	362.69	108.05	126.59	44.45	98.28	128.17	134.58	114.81	126.45	115.59	260.58	137.57	232.80	70.03	239.15	187.69	124.36	133.92	67.42	29.32	45.74	106.80
23	I2	Intron	0	38.73	12.93	2.69	8.64	7.84	24.58	6.48	8.87	9.45	14.49	6.93	7.30	0.78	19.18	9.22	17.16	24.58	20.11	15.39	7.59	7.45	2.90	2.18	14.25	9.76	2.84	2.57	7.20	2.95
24	I2_AR1	ActiveIntronRegion	0	39.02	13.04	2.71	8.71	7.91	24.77	6.53	8.94	9.52	14.61	6.98	7.36	0.79	19.32	9.29	17.29	24.77	20.26	15.52	7.65	7.51	2.92	2.20	14.37	9.84	2.86	2.59	7.25	2.98
25	E3_Aa	NovelBoundary	0	28.96	12.60	11.49	0.00	5.45	15.92	13.45	2.29	14.46	18.69	10.25	8.40	1.40	22.93	9.97	15.30	24.67	14.13	8.09	6.20	3.85	7.15	7.34	8.02	8.22	0.00	0.00	5.93	2.64
26	ER3a	ExonRegion	0	249.04	54.68	69.78	107.19	123.56	113.10	237.20	324.37	91.77	156.21	112.65	153.10	179.79	145.93	140.24	119.64	186.50	210.61	149.83	217.57	65.33	174.94	288.89	121.40	140.36	111.21	81.86	87.96	114.14
27	E3_Da	NovelBoundary	0	204.86	26.18	60.17	78.73	113.33	65.46	168.50	201.50	55.15	95.39	87.47	139.76	121.93	115.86	89.49	71.37	183.14	74.23	104.98	148.53	35.06	123.54	196.46	74.41	74.18	59.05	73.65	116.10	103.76
28	E3a_E4b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.14	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.79	0.00	0.00
29	E3_Db	NovelBoundary	0	40.94	14.15	6.15	8.84	26.38	14.73	13.79	13.88	7.16	15.58	2.82	17.17	18.72	20.89	15.95	14.15	29.40	47.01	0.00	22.00	17.33	2.14	4.97	22.73	4.85	0.00	2.29	15.37	5.05
30	E3b_E4a	KnownJunction	0	240.13	46.54	100.41	119.06	253.92	83.41	217.59	344.83	67.76	110.17	89.05	153.49	221.25	130.75	143.51	83.38	146.85	126.89	48.55	228.58	26.75	158.30	229.60	98.82	95.51	69.48	42.89	128.86	104.32
31	E3b_E4b	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	4.03	3.03	2.69	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.28	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	5.17	2.43	0.00
32	E3b_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.54	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
33	ER3b	ExonRegion	0	240.17	46.93	99.22	113.17	193.81	79.08	213.29	314.39	64.20	115.23	102.07	166.21	192.56	137.27	127.48	72.79	173.97	113.72	94.61	209.46	31.86	169.54	245.15	94.86	109.79	76.79	73.26	124.74	106.16
34	I3	Intron	0	63.78	14.59	17.82	21.03	16.42	36.09	18.02	20.15	20.93	18.70	10.30	14.81	6.68	33.38	17.71	29.30	55.31	34.22	22.17	14.65	20.30	4.64	2.85	23.08	20.45	6.97	3.14	18.19	7.99
35	I3_AR1	ActiveIntronRegion	0	63.96	14.63	17.87	21.08	16.47	36.19	18.07	20.21	20.98	18.75	10.33	14.86	6.69	33.47	17.75	29.38	55.46	34.32	22.23	14.69	20.36	4.65	2.85	23.15	20.51	6.99	3.15	18.24	8.02
36	E4_Aa	NovelBoundary	0	35.21	4.85	12.71	10.78	7.22	17.07	10.18	18.71	12.21	16.54	10.82	8.80	0.00	11.03	27.51	14.15	29.13	13.87	16.18	18.61	11.39	0.00	9.70	12.92	6.97	0.00	0.00	15.55	3.37
37	ER4a	ExonRegion	0	295.05	81.48	222.46	242.91	292.40	110.84	259.33	371.58	83.51	141.14	106.51	176.01	180.59	181.88	166.56	86.26	178.79	150.34	116.79	251.98	56.09	166.44	240.73	139.03	141.81	91.39	66.61	133.24	89.90
38	E4_Ab	KnownBoundary	0	288.08	110.43	344.47	375.30	332.76	121.74	297.00	361.10	95.19	166.25	123.28	161.29	155.46	194.42	146.50	103.27	200.81	186.35	161.62	256.53	68.15	145.12	234.58	158.57	150.21	100.68	76.63	138.21	77.22
39	ER4b	ExonRegion	0	387.03	85.68	387.51	573.99	523.13	187.71	311.03	522.11	107.29	177.09	166.78	177.69	192.08	219.15	168.33	131.88	213.05	216.35	161.75	308.10	99.30	266.73	268.76	164.31	190.38	129.89	126.60	160.99	96.99
40	E4_Da	NovelBoundary	0	21.94	9.40	13.80	0.00	21.66	34.72	10.13	9.75	8.98	11.14	5.76	9.82	4.39	17.06	16.54	24.79	33.43	23.89	8.09	3.31	21.82	0.00	0.00	11.54	12.62	11.89	2.53	19.99	1.39
41	E4a_E5a	KnownJunction	0	390.90	82.60	296.29	559.07	533.19	204.08	397.87	472.33	134.72	148.92	192.59	208.31	215.43	237.94	154.47	169.90	216.56	222.44	105.20	299.87	126.11	305.51	318.79	172.57	211.48	111.75	210.62	147.55	88.18
42	I4	Intron	0	16.40	5.47	9.95	8.13	2.77	16.36	6.28	10.95	2.23	6.14	2.02	5.06	0.37	11.16	4.17	12.26	14.38	13.19	6.34	5.47	8.49	3.06	2.56	7.92	5.67	1.78	0.00	6.00	0.38
43	I4_AR1	ActiveIntronRegion	0	16.58	5.54	10.06	8.22	2.80	16.54	6.35	11.08	2.25	6.20	2.05	5.12	0.37	11.29	4.22	12.40	14.54	13.34	6.41	5.53	8.58	3.10	2.59	8.01	5.73	1.80	0.00	6.07	0.38
44	E5_Aa	NovelBoundary	0	27.96	4.85	4.31	21.57	19.16	10.28	10.70	16.27	6.12	2.00	4.37	5.42	0.00	12.45	7.57	9.87	20.33	5.14	0.00	10.09	13.36	2.04	4.92	13.22	8.15	1.89	2.48	8.31	0.00
45	ER5a	ExonRegion	0	405.31	101.42	297.36	375.78	352.05	180.97	347.30	515.22	133.83	192.28	186.34	223.71	267.48	232.74	174.63	158.01	221.23	200.23	182.01	291.98	105.94	294.25	327.02	159.14	201.03	167.12	136.38	162.67	156.67
46	E5_Da	NovelBoundary	0	21.18	3.49	10.46	9.49	20.78	3.72	11.50	7.61	12.33	3.67	4.75	2.77	0.00	9.26	0.00	13.39	26.92	4.62	0.00	3.06	5.29	0.00	4.97	5.86	5.30	9.31	1.99	1.93	0.00
47	E5a_E6a	KnownJunction	0	370.78	134.18	261.43	129.42	247.88	190.53	422.65	596.74	244.75	254.61	240.74	258.61	385.57	230.27	264.30	198.44	187.43	180.06	291.33	244.79	149.61	290.59	372.72	193.92	266.07	213.37	216.93	155.91	303.99
48	I5	Intron	0	29.11	4.05	8.66	9.81	7.63	8.06	8.67	11.69	8.28	5.92	3.49	5.07	1.96	10.35	15.99	17.23	25.82	20.26	5.93	14.98	7.25	2.11	1.24	8.41	5.45	3.69	0.89	10.67	3.27
49	I5_AR1	ActiveIntronRegion	0	34.61	1.04	9.09	9.26	9.40	8.15	13.26	17.36	7.60	5.34	3.46	6.27	5.02	9.84	19.81	14.34	21.78	19.97	7.33	16.76	6.57	4.93	2.07	11.49	5.29	4.27	0.59	13.82	5.44
50	I5_SR1	SilentIntronRegion	0	27.80	4.39	10.23	11.23	8.31	7.73	6.69	11.06	9.18	7.88	4.32	4.78	0.00	10.55	14.04	15.98	27.20	19.73	5.73	16.97	8.04	1.54	0.84	7.89	7.13	3.47	0.89	10.51	3.37
51	I5_AR2	ActiveIntronRegion	0	25.55	6.79	6.13	8.52	4.95	8.51	6.74	6.78	7.83	3.88	2.41	4.27	1.53	10.72	14.91	22.22	28.45	21.58	4.83	10.54	6.91	0.00	0.93	6.00	3.33	3.42	1.24	7.72	0.92
52	E6_Aa	NovelBoundary	0	37.46	12.51	12.41	8.41	6.78	6.60	13.96	15.43	13.16	18.34	4.68	10.39	2.61	15.29	17.74	24.63	43.53	28.51	16.18	7.77	7.74	7.24	0.00	28.89	8.49	21.20	0.00	17.48	14.69
53	ER6a	ExonRegion	0	499.82	143.93	335.12	344.16	316.39	232.17	368.28	716.19	204.60	232.58	221.94	269.59	358.31	260.88	227.00	182.79	270.37	229.80	226.21	355.91	138.85	361.84	357.34	238.34	254.29	213.28	227.52	177.57	249.52
54	E6_Da	NovelBoundary	0	2.36	3.88	2.72	0.00	0.00	1.42	0.00	0.00	1.37	0.00	0.00	1.30	1.40	0.00	8.77	0.00	2.57	4.62	0.00	0.00	1.97	4.76	0.00	0.00	1.70	5.92	0.00	0.00	3.30
55	E6a_E7a	KnownJunction	0	494.71	209.22	452.75	409.17	373.29	189.96	358.45	644.92	274.50	195.41	227.96	279.66	388.47	254.49	300.97	150.01	310.25	245.43	186.13	255.46	131.24	324.86	317.71	227.18	254.89	145.48	220.91	212.39	304.05
56	I6	Intron	0	7.39	0.00	1.73	0.00	1.68	0.47	0.69	1.27	0.00	0.00	0.00	0.43	0.00	1.40	0.00	4.27	2.06	1.99	2.20	0.00	1.47	1.24	0.00	1.48	2.46	0.00	0.00	0.56	1.38
57	I6_AR1	ActiveIntronRegion	0	5.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.24	0.00	0.00	0.00	0.00	0.00	0.00	3.77	0.00	2.85	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
58	I6_SR1	SilentIntronRegion	0	11.94	0.00	0.00	0.00	0.00	0.00	1.44	0.00	0.00	0.00	0.00	1.24	0.00	0.00	0.00	0.00	0.00	2.73	4.53	0.00	2.85	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
59	I6_SR2	SilentIntronRegion	0	6.45	0.00	2.44	0.00	2.42	0.68	0.53	1.77	0.00	0.00	0.00	0.16	0.00	2.02	0.00	6.04	2.91	2.01	1.54	0.00	1.04	1.79	0.00	2.13	3.54	0.00	0.00	0.81	1.98
60	E7_Aa	NovelBoundary	0	11.68	0.00	1.17	0.00	0.00	7.06	0.00	0.00	0.00	5.87	6.45	0.00	1.62	0.91	0.00	2.98	3.69	4.62	0.00	0.00	1.97	0.00	0.00	0.00	1.86	0.00	0.00	0.00	2.05
61	ER7a	ExonRegion	0	475.97	151.93	381.54	435.50	437.49	237.43	398.66	662.33	194.49	226.84	206.96	260.54	367.40	241.65	289.31	159.12	243.57	219.27	208.52	321.43	136.50	356.46	323.05	218.77	253.81	193.12	204.44	192.22	254.98
62	E7_Da	NovelBoundary	0	181.73	37.13	46.37	58.45	61.90	50.84	43.77	81.47	50.49	66.51	11.74	39.64	46.56	67.20	90.09	50.80	147.37	66.27	80.92	42.84	27.11	36.71	64.52	40.79	39.51	63.26	44.88	33.25	51.70
63	E7a_E8a	KnownJunction	0	341.23	152.50	370.96	482.29	520.81	266.92	433.75	506.07	196.33	218.22	214.45	226.35	326.88	187.36	257.92	119.80	192.70	201.64	291.10	295.24	109.26	276.78	261.02	187.82	229.05	177.36	200.43	173.48	212.21
64	I7	Intron	0	66.47	19.89	26.02	26.87	22.20	31.70	17.40	48.52	31.08	20.83	12.17	19.34	20.67	33.82	41.14	39.03	58.33	38.15	22.50	23.40	20.09	23.55	22.80	29.81	20.13	22.14	15.40	19.81	13.68
65	I7_AR1	ActiveIntronRegion	0	66.76	19.97	26.14	26.99	22.30	31.84	17.47	48.73	31.21	20.92	12.22	19.42	20.76	33.97	41.32	39.20	58.58	38.32	22.60	23.50	20.18	23.65	22.90	29.94	20.22	22.23	15.47	19.90	13.75
66	E8_Aa	NovelBoundary	0	61.29	22.01	26.46	37.10	20.34	19.15	14.93	25.63	26.37	18.10	7.69	14.04	14.27	26.74	79.73	38.48	37.48	23.12	32.15	27.21	12.92	18.09	9.21	20.40	19.36	12.19	11.08	12.49	14.06
67	ER8a	ExonRegion	0	333.64	144.42	234.15	287.26	239.72	178.64	325.33	500.09	194.07	176.61	157.26	175.56	281.70	165.83	224.71	128.47	196.22	167.54	178.26	252.95	109.63	284.69	233.40	192.86	170.87	132.65	151.94	162.43	165.43
68	E8_Da	KnownBoundary	0	0.00	0.00	0.92	0.00	5.60	1.73	2.12	0.00	1.13	0.00	1.17	1.87	7.23	0.00	0.00	3.21	0.86	0.00	0.00	0.00	1.89	3.79	0.00	0.00	1.40	0.00	0.00	0.00	2.67
69	E8_Db	KnownBoundary	0	0.00	4.75	1.10	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.98	1.13	0.00	16.18	0.00	0.00	0.00	1.97	2.69	5.23	0.00	0.00	0.00	0.00
70	ER8b	ExonRegion	0	17.15	13.14	9.72	12.19	4.98	3.67	8.06	0.00	10.11	8.66	3.17	3.71	15.59	5.74	13.07	15.18	5.68	17.28	27.15	5.62	9.98	14.42	7.84	11.47	10.96	3.14	20.76	3.80	6.71
71	ER8c	ExonRegion	0	2.66	1.74	1.33	3.12	5.49	3.69	1.89	2.40	4.76	3.51	2.45	6.81	2.35	2.00	7.28	3.50	4.13	4.47	5.07	2.16	2.81	3.61	2.91	3.31	3.03	3.42	4.31	5.37	1.19
72	IG33_AR2	ActiveIntergenicRegion	0	1.25	0.94	1.34	0.52	0.71	3.01	1.18	2.15	3.11	3.27	2.52	7.06	3.26	3.63	2.40	4.16	3.70	3.09	3.26	0.40	2.29	1.71	4.75	3.77	3.55	1.61	3.47	1.55	2.25