Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	AL121928.2	Gene	0	5.21	1.36	2.49	2.32	0.95	1.87	3.07	2.45	0.73	2.90	1.81	1.20	1.95	2.32	2.80	5.15	3.68	4.85	1.04	10.96	1.34	2.51	3.93	2.51	2.04	2.35	0.95	1.06	2.94
2	501575	Transcript	0	0.00	0.00	0.28	0.00	0.00	0.47	0.00	0.00	0.00	0.00	0.32	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
3	502129	Transcript	0	13.17	3.34	5.81	1.59	4.08	3.88	8.69	5.79	1.68	8.01	4.34	3.46	3.89	5.54	7.23	12.05	8.73	15.26	2.20	30.28	2.97	5.54	10.95	8.30	5.75	5.58	1.12	1.59	7.10
4	ER1a	ExonRegion	0	0.00	0.00	0.84	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.97	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
5	ER1b	ExonRegion	0	0.00	0.00	0.93	2.16	0.00	0.00	0.26	0.00	0.00	0.00	0.27	0.00	0.00	0.21	0.00	0.42	0.04	0.00	0.00	0.03	0.03	0.00	0.40	0.00	0.00	0.00	0.02	0.00	0.00
6	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
7	ER2a	ExonRegion	0	3.80	1.14	0.00	0.00	0.00	0.97	4.68	1.30	0.39	2.05	4.20	0.00	1.38	0.08	0.00	4.78	1.54	2.73	0.00	15.01	4.52	1.92	5.30	1.52	0.00	3.90	0.62	0.63	0.95
8	E2a_E4a	NovelJunction	0	8.43	0.00	1.12	0.00	0.00	6.79	0.00	4.48	0.00	5.83	1.61	2.53	8.12	7.64	18.34	3.67	11.66	4.62	0.00	14.31	0.00	2.33	7.04	0.00	1.82	0.00	0.00	0.00	0.00
9	E2a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	1.42	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
10	E2b_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
11	E2b_E4a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.76	0.00	0.00	1.97	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
12	ER2b	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.07	0.00	0.04	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.17	0.00	0.00	0.09	0.00	0.00	0.30	0.00	0.00	0.00	0.00	0.00	0.00
13	Ix	Intron	0	14.24	2.07	7.17	1.54	7.33	9.43	7.78	4.73	3.85	9.28	0.51	5.29	2.91	10.87	14.35	22.12	28.79	21.74	4.11	10.04	3.06	2.32	1.94	10.14	6.43	3.70	0.78	1.75	6.74
14	Ix_SR1	SilentIntronRegion	0	11.57	1.64	2.46	0.00	4.81	5.10	2.29	3.62	2.94	7.77	0.00	2.50	1.52	7.94	15.74	14.01	16.60	19.43	2.81	6.88	0.42	1.37	0.28	7.75	3.06	1.79	0.00	0.00	3.42
15	Ix_AR1	ActiveIntronRegion	0	19.39	1.60	8.56	0.00	8.46	11.03	13.22	8.01	3.32	11.18	0.00	6.73	2.87	14.37	8.08	22.54	38.76	28.05	3.47	7.39	1.96	2.47	4.21	9.30	4.65	4.20	0.00	0.99	7.74
16	Ix_AR2	ActiveIntronRegion	0	13.87	2.45	8.84	2.73	8.14	10.91	8.42	4.25	4.48	9.50	0.91	6.09	3.57	11.18	15.97	25.78	31.18	21.04	4.93	12.40	4.61	2.70	1.94	11.62	8.59	4.41	1.39	2.76	7.97
17	ER3a	ExonRegion	0	4.15	1.49	1.52	2.33	0.00	2.60	5.56	1.56	0.89	2.41	1.14	1.53	1.89	3.57	1.78	3.32	8.77	8.27	0.00	16.45	1.31	1.48	4.23	3.99	2.99	0.00	0.09	1.06	2.89
18	E3_Da	NovelBoundary	0	8.26	9.70	3.36	0.00	25.35	5.68	5.72	6.62	1.52	18.93	13.70	2.77	1.97	14.58	27.11	11.09	30.05	18.49	8.09	3.31	0.00	0.00	0.00	13.40	5.19	6.14	0.00	2.29	5.41
19	E3a_E4a	KnownJunction	0	10.74	4.85	2.49	0.00	0.00	1.50	2.63	2.54	0.00	3.99	0.00	4.52	0.00	2.61	0.00	3.29	4.57	0.00	0.00	3.80	3.45	2.48	9.75	8.31	1.93	0.00	0.00	0.00	6.14
20	E3a_E5a	NovelJunction	0	20.11	0.00	10.39	8.20	7.22	11.09	18.25	4.28	3.11	5.27	5.88	5.81	2.87	3.48	8.37	3.82	6.80	4.62	0.00	30.27	3.61	17.89	4.38	2.81	12.73	4.38	0.00	1.75	15.32
21	Ix	Intron	0	7.72	1.93	9.87	0.00	4.22	17.63	9.58	6.10	4.68	16.64	10.12	6.84	3.27	13.49	19.36	20.80	43.01	29.79	5.52	8.86	6.16	0.00	0.78	10.23	7.62	8.15	1.32	4.93	13.30
22	Ix_AR1	ActiveIntronRegion	0	7.74	1.94	9.90	0.00	4.23	17.68	9.61	6.12	4.70	16.69	10.14	6.86	3.28	13.53	19.42	20.86	43.13	29.87	5.54	8.89	6.18	0.00	0.78	10.26	7.64	8.17	1.32	4.95	13.33
23	E4_Aa	NovelBoundary	0	19.11	9.02	26.53	10.78	40.67	19.26	30.15	18.86	23.72	39.07	9.08	7.53	8.82	24.90	103.45	9.79	58.79	27.74	0.00	39.78	17.21	15.56	7.29	27.57	12.88	26.48	2.19	18.33	9.44
24	ER4a	ExonRegion	0	36.85	9.22	16.51	7.24	5.03	10.72	13.47	13.70	4.88	23.54	13.12	7.66	12.63	16.47	16.69	30.11	20.49	30.86	13.21	57.85	7.51	16.13	23.18	17.30	11.45	16.37	6.62	6.72	20.65
25	E4_Da	NovelBoundary	0	7.61	8.34	4.09	8.84	0.00	14.89	0.00	2.09	12.21	10.55	2.53	4.19	4.49	16.13	48.04	31.59	23.61	9.25	0.00	13.31	7.22	0.00	0.00	14.00	3.14	1.97	3.88	1.80	8.22
26	E4a_E5a	KnownJunction	0	27.25	4.46	14.33	0.00	19.45	8.48	30.38	16.92	4.26	18.14	11.77	7.08	8.82	10.59	24.91	35.57	18.41	52.40	0.00	103.46	5.54	13.13	28.27	20.22	18.11	17.08	0.00	1.75	12.91
27	Ix	Intron	0	11.37	5.84	11.04	3.64	3.58	11.55	9.10	5.92	6.92	13.28	4.50	7.51	3.76	10.93	26.34	23.21	30.65	16.28	4.87	9.89	3.46	0.81	2.14	6.67	6.13	4.52	1.76	3.31	8.15
28	Ix_SR1	SilentIntronRegion	0	12.59	5.80	11.74	3.16	3.05	11.89	10.61	6.59	7.19	13.37	4.28	8.00	4.21	11.32	28.43	23.09	34.37	17.11	5.33	10.19	3.35	0.84	2.14	7.38	6.73	5.08	1.57	3.84	8.61
29	Ix_AR1	ActiveIntronRegion	0	6.08	6.03	8.02	5.72	5.86	10.09	2.58	3.02	5.76	12.89	5.45	5.39	1.82	9.21	17.30	23.76	14.60	12.71	2.88	8.60	3.95	0.70	2.17	3.63	3.51	2.10	2.54	1.05	6.21
30	ER5a	ExonRegion	0	3.53	0.87	1.98	2.31	1.05	1.40	2.00	2.17	0.49	1.66	0.75	0.94	1.39	1.49	2.60	4.05	2.27	3.05	0.35	7.12	0.53	1.95	2.52	1.47	1.69	1.59	0.77	0.78	2.09
31	ER5b	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00