Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	USMG5	Gene	0	1040.79	524.27	379.77	622.58	2138.59	521.71	1468.27	671.38	639.20	336.43	348.58	425.97	884.83	357.11	1921.39	567.28	107.25	310.21	1573.05	976.02	601.09	922.55	373.50	400.92	406.88	366.73	481.82	197.20	594.52
2	309579	Transcript	0	3761.74	1897.80	2351.39	2012.62	10842.56	2374.95	6409.31	3201.89	2638.31	1468.68	1310.27	1706.53	4139.73	1669.17	6589.11	2755.56	487.24	558.16	3015.57	3451.45	3017.82	4132.91	2147.29	1282.03	1464.30	1411.15	2143.15	675.45	2679.14
3	337003	Transcript	0	311.27	86.09	20.21	26.96	681.45	100.75	372.24	53.85	208.51	79.01	110.37	364.12	45.19	20.10	138.53	5.81	95.15	13.87	8.09	0.00	102.04	242.75	29.35	20.88	110.74	202.38	155.11	79.89	302.90
4	369815	Transcript	0	258.89	48.57	493.94	723.00	614.10	108.04	489.01	98.59	80.82	26.08	40.59	148.82	372.48	75.95	153.48	91.65	39.59	27.74	129.25	142.08	163.21	177.02	147.55	21.41	20.76	152.17	114.90	65.02	175.99
5	369811	Transcript	0	6.53	3.82	6.16	9.01	13.67	4.00	9.28	6.81	2.72	6.72	1.36	4.06	4.92	1.60	1.82	5.83	5.03	2.03	8.74	4.84	2.92	2.47	2.23	1.45	0.27	1.90	1.79	1.06	2.12
6	369825	Transcript	0	18.85	2.08	3.28	0.00	14.52	0.96	5.15	1.27	0.94	1.18	2.78	7.15	1.62	2.23	0.00	0.00	3.15	0.00	0.00	0.00	0.86	5.42	1.23	1.44	2.58	2.19	0.00	1.08	1.67
7	IG49	Intergenic	0	7.85	4.94	0.47	2.02	20.67	5.81	11.36	1.04	7.60	1.63	0.67	0.70	0.73	0.00	5.69	4.50	0.00	3.26	11.70	5.43	4.82	5.08	3.57	1.82	1.61	7.09	2.58	1.38	3.03
8	IG49_AR2	ActiveIntergenicRegion	0	0.00	0.00	0.00	0.00	11.39	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
9	IG49_SR1	SilentIntergenicRegion	0	16.75	11.70	1.12	1.83	44.83	8.42	26.46	2.30	15.38	2.35	1.71	0.31	0.89	0.00	21.70	8.54	0.00	4.26	13.58	13.18	10.16	12.62	7.69	4.03	4.73	14.24	9.16	3.46	5.03
10	IG49_AR1	ActiveIntergenicRegion	0	20.97	13.57	1.12	7.31	39.31	19.54	27.83	3.12	18.98	5.56	1.79	1.24	2.54	0.00	7.06	12.98	0.00	10.68	39.95	13.87	12.62	11.87	9.75	5.00	3.70	21.18	3.50	2.59	4.99
11	ER1a	ExonRegion	0	2168.78	1233.10	937.19	2406.14	7566.40	1091.17	2939.51	1438.24	986.75	865.10	946.32	840.27	1718.29	643.27	5551.50	1793.99	128.76	1242.40	4994.77	2186.81	1155.32	2096.17	783.12	824.22	962.44	810.18	1082.15	438.10	1007.92
12	ER1b	ExonRegion	0	4983.78	2670.01	1801.91	4258.48	15574.03	2796.39	7573.86	3629.34	2230.78	1962.45	2030.81	1877.98	3717.57	1492.58	11022.18	3836.58	292.88	1962.70	9570.15	4873.97	3222.34	5091.16	2236.37	1773.69	2110.50	2013.45	2657.33	992.74	2228.42
13	E1_Da	NovelBoundary	0	8.73	0.00	17.24	10.14	0.00	6.10	68.26	2.44	9.84	12.94	8.04	15.09	4.94	5.63	18.34	14.15	16.63	9.12	8.09	6.95	27.28	18.09	9.36	0.00	1.82	16.01	4.97	9.03	12.25
14	E1a_E2b	KnownJunction	0	258.89	48.57	493.94	723.00	614.10	108.04	489.01	98.59	80.82	26.08	40.59	148.82	372.48	75.95	153.48	91.65	39.59	27.74	129.25	142.08	163.21	177.02	147.55	21.41	20.76	152.17	114.90	65.02	175.99
15	E1a_E3a	KnownJunction	1	311.27	86.09	20.21	26.96	681.45	100.75	372.24	53.85	208.51	79.01	110.37	364.12	45.19	20.10	138.53	5.81	95.15	13.87	8.09	0.00	102.04	242.75	29.35	20.88	110.74	202.38	155.11	79.89	302.90
16	E1a_E4a	KnownJunction	0	3761.74	1897.80	2351.39	2012.62	10842.56	2374.95	6409.31	3201.89	2638.31	1468.68	1310.27	1706.53	4139.73	1669.17	6589.11	2755.56	487.24	558.16	3015.57	3451.45	3017.82	4132.91	2147.29	1282.03	1464.30	1411.15	2143.15	675.45	2679.14
17	E1a_E5a	NovelJunction	0	2.36	0.00	0.00	0.00	0.00	0.00	2.46	0.00	1.34	0.00	0.00	3.73	3.18	0.00	9.97	0.00	0.00	0.00	0.00	0.00	1.56	4.62	0.00	0.00	0.00	2.06	0.00	2.16	3.80
18	I1	Intron	0	4.58	0.98	6.89	5.47	25.36	3.99	11.39	4.50	2.74	2.20	1.45	3.20	1.29	2.14	7.45	6.23	5.01	3.73	11.22	4.21	4.57	4.95	2.21	3.61	1.09	4.32	0.84	1.49	3.17
19	I1_AR1	ActiveIntronRegion	0	7.37	2.99	13.94	9.97	70.19	7.81	27.36	4.52	4.96	1.90	1.69	4.99	1.45	1.24	16.19	7.34	1.78	2.83	19.34	4.24	8.22	14.21	5.87	3.99	2.65	3.00	2.55	4.53	4.51
20	I1_SR1	SilentIntronRegion	0	5.10	0.00	0.02	0.00	0.00	3.45	1.97	5.44	1.50	4.27	2.38	0.77	2.22	2.42	2.12	8.44	3.12	2.91	9.15	5.56	5.77	1.48	0.00	3.73	0.00	4.09	0.00	0.00	2.71
21	I1_AR2	ActiveIntronRegion	0	6.43	0.00	0.71	0.00	0.00	5.00	2.02	4.02	2.76	4.20	0.97	2.70	1.30	2.72	5.60	11.50	8.92	10.42	20.57	6.90	5.96	1.80	0.00	6.45	0.00	7.86	0.00	0.00	3.05
22	I1_SR2	SilentIntronRegion	0	2.53	0.00	4.58	4.41	4.50	1.57	4.12	4.31	1.64	1.74	1.10	2.74	0.94	2.65	3.31	4.62	7.48	4.14	5.89	3.69	1.80	0.03	0.56	3.19	0.44	5.07	0.00	0.00	2.44
23	E2_Aa	NovelBoundary	0	8.43	3.88	6.88	0.00	0.00	0.00	7.78	4.88	3.68	1.60	2.59	1.60	1.21	3.39	15.95	13.23	8.53	4.62	0.00	3.31	0.00	0.00	0.00	5.38	0.00	0.00	1.89	0.00	1.35
24	ER2a	ExonRegion	0	6.53	3.82	6.16	9.01	13.67	4.00	9.28	6.81	2.72	6.72	1.36	4.06	4.92	1.60	1.82	5.83	5.03	2.03	8.74	4.84	2.92	2.47	2.23	1.45	0.27	1.90	1.79	1.06	2.12
25	E2_Ab	KnownBoundary	0	8.91	4.56	1.22	0.00	0.00	3.45	5.84	4.28	2.74	7.19	1.61	2.80	1.82	1.00	0.00	6.96	4.19	0.00	8.09	4.13	1.60	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
26	E2_Ac	KnownBoundary	0	42.71	12.31	149.17	189.59	412.79	32.57	135.31	27.57	23.63	17.26	14.39	42.02	104.23	13.80	56.21	24.94	14.88	18.24	168.59	33.91	33.13	35.15	55.21	11.54	6.18	34.89	46.86	23.50	57.87
27	ER2b	ExonRegion	0	117.41	22.26	180.03	368.07	579.52	63.23	284.44	50.94	35.95	28.55	30.15	79.16	190.95	37.19	85.88	56.24	20.81	33.36	223.27	89.94	79.88	95.55	102.47	15.06	12.07	88.54	65.94	47.09	96.34
28	ER2c	ExonRegion	0	278.85	46.53	134.86	102.19	194.73	88.30	269.25	135.48	64.04	30.56	52.40	98.16	218.02	89.52	203.10	53.64	23.55	49.72	376.59	175.45	93.58	113.87	90.91	33.08	40.57	87.10	89.86	46.75	102.94
29	E2_Da	NovelBoundary	0	7.85	9.70	5.61	9.06	0.00	3.18	2.40	0.00	2.59	1.60	1.30	1.51	3.18	1.37	0.00	6.50	2.25	0.00	8.09	3.80	6.54	0.00	0.00	0.00	1.93	0.00	0.00	2.29	1.78
30	E2a_E3a	KnownJunction	0	37.69	4.17	6.55	0.00	29.03	1.92	10.30	2.54	0.00	2.04	5.57	14.31	3.25	3.55	0.00	0.00	6.30	0.00	0.00	0.00	1.72	10.84	2.46	2.87	5.15	4.38	0.00	2.16	3.33
31	E2a_E4a	KnownJunction	0	306.67	47.12	470.32	420.17	599.51	94.84	169.18	109.39	48.27	27.24	19.49	45.96	177.40	82.42	187.36	24.79	11.32	34.29	371.58	249.83	74.48	113.13	49.10	44.86	41.29	56.99	49.75	23.18	37.37
32	I2	Intron	0	4.10	2.54	0.66	2.02	2.20	3.79	3.74	2.18	1.77	3.90	0.47	1.67	1.06	2.75	4.09	3.31	6.13	3.70	4.67	2.55	3.93	1.01	0.10	2.42	1.21	0.18	0.10	1.28	1.69
33	I2_SR1	SilentIntronRegion	0	4.10	2.54	0.66	2.02	2.20	3.79	3.74	2.18	1.77	3.90	0.47	1.67	1.06	2.75	4.09	3.31	6.13	3.71	4.68	2.55	3.93	1.01	0.10	2.42	1.21	0.18	0.10	1.28	1.70
34	E3_Aa	NovelBoundary	0	0.00	0.00	3.66	16.18	14.00	9.71	2.92	0.00	0.00	6.71	1.52	4.52	1.46	3.23	0.00	0.00	6.62	4.62	8.09	4.13	3.37	0.00	0.00	3.05	1.93	0.00	0.00	0.00	0.00
35	ER3a	ExonRegion	0	206.41	88.51	5.30	13.10	95.26	54.06	170.70	25.92	109.40	52.11	46.17	131.03	19.03	16.57	118.56	17.96	37.04	38.89	19.70	6.98	43.85	113.12	7.77	24.72	79.20	87.12	33.17	25.19	121.93
36	E3_Da	NovelBoundary	0	0.00	3.97	0.00	0.00	0.00	1.61	5.21	0.00	1.43	1.64	1.61	1.54	1.62	2.46	0.00	0.00	7.47	9.25	0.00	4.13	2.05	0.00	0.00	8.37	0.00	0.00	0.00	0.00	2.01
37	E3a_E4a	KnownJunction	1	161.62	131.85	0.00	0.00	58.06	46.62	412.06	9.41	89.13	110.13	149.79	309.69	31.97	11.96	282.64	18.82	69.10	56.12	16.18	7.77	30.52	40.16	22.51	24.94	84.90	225.90	115.10	102.44	277.48
38	I3	Intron	0	7.04	12.36	0.55	1.18	3.21	9.82	5.97	0.76	7.93	4.98	4.20	2.48	0.91	6.61	10.18	14.12	5.88	11.33	11.04	13.36	10.78	0.30	0.15	9.02	2.22	1.68	0.75	0.67	1.10
39	I3_SR1	SilentIntronRegion	0	7.08	12.42	0.55	1.19	3.23	9.87	5.99	0.76	7.96	5.01	4.22	2.49	0.91	6.64	10.23	14.19	5.91	11.39	11.09	13.41	10.83	0.30	0.15	9.06	2.24	1.69	0.76	0.67	1.10
40	E4_Aa	NovelBoundary	0	11.44	12.99	0.00	0.00	0.00	12.74	2.69	0.00	7.49	10.95	8.98	4.01	1.37	10.92	9.77	6.35	4.10	4.62	0.00	4.13	11.79	0.00	0.00	10.23	1.89	1.97	0.00	0.00	6.11
41	ER4a	ExonRegion	0	1635.83	652.46	722.32	750.61	2209.52	703.63	2404.66	1024.31	973.57	397.11	378.89	761.65	1356.58	603.68	2059.33	536.44	217.04	238.92	1522.71	1205.60	782.77	1548.14	504.35	611.42	452.04	509.37	665.69	308.25	988.76
42	E4_Da	NovelBoundary	0	0.00	9.50	5.21	0.00	0.00	3.91	0.00	0.00	5.76	3.40	0.00	1.66	5.29	3.59	7.57	6.96	7.07	0.00	8.09	6.29	15.56	3.79	0.00	10.23	0.00	0.00	0.00	0.00	0.00
43	E4a_E5a	KnownJunction	0	3539.78	1243.68	50.98	951.85	2569.27	878.50	3156.08	1782.07	1910.47	459.45	329.70	617.28	1526.14	1098.44	3856.44	578.64	169.79	512.95	3316.79	2260.66	839.87	3729.09	305.15	1506.39	726.75	432.79	210.57	238.54	988.56
44	I4	Intron	0	3.77	1.89	0.00	0.00	0.00	4.03	2.39	0.00	2.61	2.54	0.00	0.00	0.00	2.92	2.70	1.45	0.00	5.83	1.87	1.62	8.36	0.00	0.00	6.31	0.00	0.00	0.00	0.00	0.00
45	I4_SR1	SilentIntronRegion	0	3.86	1.93	0.00	0.00	0.00	4.12	2.44	0.00	2.67	2.60	0.00	0.00	0.00	2.99	2.77	1.49	0.00	5.97	1.92	1.65	8.56	0.00	0.00	6.45	0.00	0.00	0.00	0.00	0.00
46	E5_Aa	NovelBoundary	0	0.00	18.61	1.05	0.00	0.00	13.97	5.32	2.54	7.13	8.71	3.10	0.00	1.56	10.50	7.77	3.44	3.53	32.36	16.18	0.00	9.31	2.29	0.00	2.57	1.48	0.00	0.00	0.00	0.00
47	ER5a	ExonRegion	0	3841.98	2247.41	39.32	372.47	718.52	2216.76	5151.65	2959.37	2762.69	1334.96	1168.83	1090.99	3317.64	1416.14	7550.05	2522.05	281.19	1212.01	5966.94	4183.07	2553.80	3673.03	1037.59	1664.71	1745.57	1082.97	567.01	375.29	1917.72
48	E5_Da	NovelBoundary	0	13.15	13.09	1.42	10.78	0.00	24.79	2.23	6.92	12.06	7.79	2.91	5.84	4.20	4.14	24.32	7.42	12.63	18.49	0.00	14.64	21.70	0.00	0.00	11.36	4.66	2.19	0.00	2.02	10.76
49	E5a_E6a	KnownJunction	0	595.81	420.09	67.64	193.26	293.27	490.64	4881.11	335.97	984.01	1045.34	1742.75	1108.05	2399.28	674.36	6439.82	1247.69	286.95	576.52	3639.81	540.36	501.62	810.60	1262.61	274.13	427.27	787.86	1413.10	393.55	1734.30
50	I5	Intron	0	9.10	12.91	1.81	3.45	4.50	8.76	7.99	2.95	10.96	6.42	2.43	2.82	1.19	4.82	18.63	10.38	8.91	7.16	14.08	8.10	11.54	1.01	1.16	8.27	4.12	2.58	1.47	1.76	4.17
51	I5_AR1	ActiveIntronRegion	0	9.19	9.28	1.43	0.00	2.09	6.48	12.08	4.73	6.73	6.81	2.55	0.00	1.11	6.40	6.68	9.57	1.92	7.43	12.32	6.76	12.81	1.55	0.00	9.22	1.23	0.67	0.00	0.00	0.86
52	I5_SR1	SilentIntronRegion	1	10.92	5.78	0.00	0.00	4.51	8.06	8.56	2.45	5.31	5.23	3.21	1.71	0.72	5.69	17.05	6.91	9.51	4.82	12.36	10.20	5.15	0.67	1.70	9.11	3.92	1.97	0.99	2.07	3.03
53	I5_AR2	ActiveIntronRegion	0	8.26	17.42	2.62	6.02	5.19	11.56	8.73	2.99	15.54	7.02	2.30	4.57	1.53	6.10	27.06	14.24	14.43	8.95	17.56	10.52	14.50	0.67	1.77	10.92	6.03	2.59	1.29	1.43	6.17
54	I5_SR2	SilentIntronRegion	0	9.58	10.70	1.50	2.34	4.32	6.30	5.97	2.61	8.37	6.00	2.34	1.82	0.96	2.69	12.35	7.12	4.10	5.73	11.02	5.03	9.68	1.38	0.59	4.73	2.71	3.25	2.20	2.52	3.03
55	E6_Aa	NovelBoundary	0	11.97	13.19	1.54	0.00	0.00	6.71	21.17	4.93	6.55	11.50	0.00	1.66	1.62	2.97	0.00	9.72	1.10	0.00	16.18	4.13	12.07	0.00	0.00	2.99	0.00	0.00	7.16	0.00	3.33
56	ER6a	ExonRegion	1	729.75	436.28	1245.52	1871.54	7418.84	351.62	1527.94	277.37	743.02	301.90	465.51	617.43	1077.93	325.55	2121.05	297.61	191.56	222.46	1408.77	922.16	501.03	565.26	605.52	462.53	343.61	445.54	1459.83	436.56	937.86
57	ER6b	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.87	0.32	0.00	0.00	0.00	0.91	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00