Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	RP11-773D16.1	Gene	0	82.80	26.70	22.83	54.75	12.62	22.92	25.17	12.89	30.43	40.01	23.95	31.35	18.51	39.99	28.48	33.31	39.06	46.55	26.91	56.93	53.19	28.38	19.17	36.67	29.81	17.94	22.50	48.62	25.69
2	495430	Transcript	0	24.78	13.55	9.30	23.39	3.76	3.75	13.22	5.40	12.01	11.14	8.87	11.00	4.93	17.32	11.60	11.86	13.53	10.32	7.22	23.40	17.78	10.67	6.72	10.91	17.02	7.15	4.42	21.77	9.54
3	470445	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
4	483080	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
5	488805	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
6	496359	Transcript	0	72.97	22.49	5.83	10.14	11.79	9.59	13.39	0.00	19.43	35.03	52.20	51.99	8.66	35.47	43.05	3.44	0.00	18.49	32.37	12.32	13.36	16.48	4.48	11.19	16.44	12.87	6.56	33.88	21.79
7	477192	Transcript	0	2.54	0.90	0.69	1.11	0.00	0.92	0.42	0.19	1.47	2.84	1.81	3.30	0.80	1.75	3.46	2.96	4.84	1.03	1.81	5.47	1.62	0.74	0.93	1.44	1.83	3.00	1.32	8.93	2.19
8	419697	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
9	484794	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
10	430963	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
11	ER1a	ExonRegion	0	17.42	4.16	4.01	0.00	6.05	4.51	7.22	1.82	1.21	6.10	2.09	4.90	2.12	1.49	6.52	10.06	0.74	9.33	5.21	2.06	4.03	11.50	4.55	8.77	4.23	3.58	2.78	10.56	1.60
12	E1_Ab	KnownBoundary	1	24.13	0.00	11.41	29.98	20.48	17.42	10.36	11.69	22.05	37.59	9.27	27.17	13.06	6.25	38.87	38.10	6.55	32.62	8.09	17.04	19.21	25.52	8.96	24.23	14.47	22.66	17.25	41.43	6.54
13	E1_Ac	KnownBoundary	0	13.92	4.85	6.95	7.98	0.00	10.70	2.69	8.96	7.61	17.66	4.62	26.17	5.19	8.53	8.77	7.04	11.86	4.62	16.18	8.27	7.86	19.20	25.91	21.77	9.40	20.94	13.57	17.03	21.72
14	ER1b	ExonRegion	0	9.98	0.00	4.00	0.00	0.62	4.94	1.45	1.38	2.39	1.04	0.52	3.98	1.30	1.36	2.63	3.01	2.47	4.61	2.40	2.46	3.66	8.96	4.41	2.35	0.94	3.68	7.73	9.63	1.34
15	ER1c	ExonRegion	0	8.20	3.70	3.52	32.45	2.49	1.89	4.86	1.77	0.00	0.00	0.00	5.18	0.78	0.75	6.23	8.51	6.19	2.46	0.91	1.76	4.81	7.08	4.05	1.37	0.79	1.75	7.56	7.91	0.02
16	E1_Ad	KnownBoundary	0	18.34	12.99	28.95	105.90	53.79	6.83	20.43	7.07	6.94	10.51	2.75	13.28	9.71	9.19	0.00	27.85	12.31	23.12	8.09	0.00	21.02	24.31	24.03	5.56	7.99	20.60	11.73	30.37	7.03
17	ER1d	ExonRegion	0	49.51	10.43	20.33	130.77	25.98	4.74	17.47	3.32	1.01	13.19	4.74	8.08	10.65	12.04	33.27	43.22	17.72	74.12	9.50	19.73	23.69	19.09	28.68	7.97	10.48	17.60	14.33	36.02	14.45
18	E1_Ae	KnownBoundary	1	132.25	27.44	61.56	314.48	55.85	24.75	35.59	11.79	7.37	47.46	21.48	29.34	29.14	34.32	80.33	87.51	50.02	178.00	16.18	61.61	65.78	77.69	88.65	39.48	33.87	57.85	32.25	136.68	68.80
19	ER1e	ExonRegion	0	129.73	15.87	51.04	131.25	41.75	22.60	39.38	23.47	13.33	57.96	34.46	38.61	23.06	45.57	48.63	49.21	46.99	81.42	19.65	67.62	49.06	49.81	37.34	40.09	30.13	37.35	29.90	85.47	31.12
20	E1_Da	NovelBoundary	0	8.43	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.77	1.88	2.06	0.00	3.82	2.54	4.62	0.00	7.61	0.00	8.26	2.12	2.81	1.59	0.00	0.00	3.86	0.00
21	E1a_E3a	KnownJunction	0	306.25	75.04	74.82	192.18	34.48	45.50	53.50	32.65	39.83	126.35	73.33	103.79	54.07	88.58	95.08	62.50	90.42	153.73	80.92	164.74	135.65	108.95	57.92	61.25	85.24	64.63	72.31	142.43	71.57
22	E2_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.48	0.00	0.00	1.46	0.86	17.94	2.98	0.00	9.25	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.20	1.65
23	ER2a	ExonRegion	1	5.08	1.81	1.38	2.22	0.00	1.84	0.83	0.38	2.95	3.64	2.17	3.68	1.60	3.50	6.92	5.92	9.69	2.05	3.62	6.72	3.24	1.49	1.86	2.88	1.87	3.82	2.64	11.70	3.06
24	E2_Da	NovelBoundary	0	3.01	0.00	3.86	0.00	0.00	1.69	0.00	0.00	7.13	0.00	0.00	2.68	0.00	0.00	9.97	0.00	11.39	0.00	0.00	0.00	0.00	2.09	0.00	2.63	1.93	0.00	2.29	0.00	9.24
25	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.04	1.46	2.92	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.22	0.00	0.00	0.00	0.00	1.78	2.19	0.00	6.16	1.32
26	I2_SR1	SilentIntronRegion	0	1.89	0.86	0.00	0.00	0.00	1.86	1.08	1.02	3.74	2.05	0.39	1.77	1.40	1.58	4.10	0.82	3.77	1.09	0.53	0.69	1.88	0.30	0.90	1.36	1.65	0.70	0.91	0.27	2.15
27	I2_AR1	ActiveIntronRegion	0	4.12	3.16	0.19	1.64	0.00	3.35	1.35	0.55	5.89	5.13	0.61	1.52	1.35	2.96	1.00	1.38	12.82	2.17	1.15	1.87	3.24	1.24	0.86	3.77	1.39	0.24	0.42	2.93	1.68
28	I2_SR2	SilentIntronRegion	0	2.55	3.21	0.09	0.58	0.13	3.07	0.82	0.10	3.83	2.32	1.24	1.16	0.80	1.43	0.71	1.53	8.03	1.58	2.07	0.75	4.02	0.93	0.53	1.04	0.87	0.85	0.45	0.72	1.51
29	E3_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.26	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.05	0.00	0.00	2.45	0.00	0.00	0.00	0.00	0.00
30	ER3a	ExonRegion	0	309.75	95.68	56.96	52.93	19.29	75.52	109.59	48.22	102.01	162.99	94.74	127.62	79.07	119.72	96.72	134.13	103.34	173.24	67.82	190.01	213.89	114.14	61.77	116.98	106.50	51.24	98.12	163.34	115.68
31	E3_Ab	KnownBoundary	0	171.88	44.98	11.06	92.53	6.93	91.01	34.56	29.96	103.60	92.11	43.43	52.71	27.77	51.03	30.89	85.45	51.25	61.77	40.24	111.48	185.79	80.51	53.34	98.64	54.55	39.48	21.22	93.59	54.01
32	E3_Ac	KnownBoundary	0	321.29	53.32	78.13	86.06	7.37	89.05	93.20	148.85	172.70	78.45	75.86	92.32	104.23	149.22	18.34	87.90	73.61	23.63	7.87	167.47	149.97	114.20	83.63	113.83	108.05	63.13	49.40	176.13	176.69
33	ER3b	ExonRegion	0	356.25	53.87	61.94	30.71	17.44	100.35	73.98	57.81	161.23	139.04	54.63	124.93	78.46	136.87	74.49	111.86	132.73	111.08	33.94	200.12	225.08	141.15	64.55	176.61	112.63	59.25	58.06	127.63	122.00
34	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
35	E3a_E4b	KnownJunction	0	366.65	129.14	100.13	171.04	28.00	110.50	91.72	80.62	143.80	225.65	142.39	149.06	81.94	185.25	140.52	211.67	167.36	350.61	129.25	326.74	216.48	125.00	131.79	207.92	163.10	64.03	75.74	177.70	112.94
36	E3a_E5a	KnownJunction	0	72.97	22.49	5.83	10.14	11.79	9.59	13.39	0.00	19.43	35.03	52.20	51.99	8.66	35.47	43.05	3.44	0.00	18.49	32.37	12.32	13.36	16.48	4.48	11.19	16.44	12.87	6.56	33.88	21.79
37	E3a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
38	ER3c	ExonRegion	0	442.32	114.23	85.17	100.25	30.05	107.14	83.62	73.82	148.88	209.67	127.34	166.90	86.99	187.73	128.09	144.90	157.24	212.43	94.60	287.78	228.13	158.70	110.01	202.42	163.04	71.18	86.79	193.34	140.19
39	ER4a	ExonRegion	0	34.93	15.13	6.32	16.12	3.09	8.53	13.39	8.68	12.85	20.73	11.13	10.86	11.89	30.72	13.15	9.47	19.63	12.80	7.47	51.34	30.49	11.91	5.48	13.75	25.20	10.24	4.76	43.55	17.14
40	E4_Ab	KnownBoundary	0	19.94	4.56	4.41	49.39	7.07	12.62	10.41	9.90	13.98	25.72	6.07	3.13	16.78	36.23	35.68	7.65	10.69	13.87	24.28	74.59	51.22	15.31	0.00	21.41	25.84	8.02	11.53	27.72	23.54
41	ER4b	ExonRegion	0	367.03	104.02	133.53	211.64	43.82	82.26	92.49	63.50	128.03	153.86	98.71	138.32	88.63	208.03	83.68	130.94	169.13	167.86	92.68	303.10	185.22	127.63	82.37	210.06	148.34	73.73	83.88	163.85	98.93
42	E4a_E5a	KnownJunction	0	46.78	34.90	26.88	77.43	5.89	1.96	32.27	11.10	33.98	17.74	22.27	28.25	5.70	37.07	26.71	27.92	33.74	19.14	16.18	40.19	36.58	19.25	16.84	21.11	38.64	14.76	10.14	32.98	19.41
43	E4a_E6a	NovelJunction	0	8.55	0.00	0.00	17.26	6.93	7.79	2.52	6.67	0.00	0.00	0.00	1.54	0.00	5.32	0.00	0.00	0.00	4.62	0.00	0.00	3.61	0.00	2.17	3.05	5.38	3.52	2.53	2.29	0.00
44	E4_Db	NovelBoundary	0	2.36	0.00	0.00	0.00	0.00	1.57	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.33	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.05
45	E4b_E5a	KnownJunction	0	356.45	94.43	96.72	275.22	30.51	71.63	72.49	46.73	117.61	164.98	116.79	115.51	84.87	177.47	39.86	126.53	150.16	146.15	145.21	305.41	204.76	94.07	66.73	188.42	99.52	54.20	96.16	168.09	120.33
46	E4b_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
47	ER4c	ExonRegion	0	352.07	86.23	115.85	235.83	49.82	69.42	71.56	46.03	140.44	150.87	103.84	110.39	89.63	180.28	57.41	121.47	156.77	180.13	138.04	240.31	186.14	95.55	69.62	167.79	107.56	73.87	104.40	158.93	112.07
48	E5_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	7.29	0.00	0.00	1.34	0.00	1.27	1.23	0.00	2.39	0.00	3.29	0.00	4.62	0.00	0.00	3.49	0.00	0.00	3.05	1.70	0.00	0.00	0.00	1.49
49	ER5a	ExonRegion	0	432.19	131.67	128.72	348.05	60.85	131.30	138.94	59.35	230.79	235.70	170.70	195.07	102.36	239.28	116.75	149.70	210.81	169.47	114.01	266.01	303.82	149.50	105.07	210.30	196.11	105.47	140.31	289.76	157.18
50	E5a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
51	ER6a	ExonRegion	0	138.53	78.99	30.04	103.23	14.37	54.92	31.41	21.71	47.06	95.93	29.39	55.52	19.09	51.64	50.28	77.98	63.88	98.76	80.31	100.47	107.68	34.84	21.07	53.98	40.75	11.15	54.48	58.80	26.69
52	E6_Da	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
53	ER6b	ExonRegion	0	17.53	19.37	0.61	17.15	4.66	12.54	9.57	1.80	10.60	5.25	1.08	2.91	3.27	10.30	13.40	7.95	16.16	28.42	30.04	15.33	27.26	0.70	0.70	7.24	1.58	0.67	3.17	1.42	2.63