Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	RP11-192P3.1	Gene	0	18.28	14.11	44.19	73.38	24.99	11.21	36.37	35.93	28.09	20.08	15.86	35.13	18.80	11.87	19.08	20.27	35.56	29.98	19.58	25.49	21.61	15.90	15.27	9.45	20.62	39.26	26.69	72.48	21.81
2	423714	Transcript	0	2.10	0.67	12.49	6.06	2.04	1.53	2.10	0.52	1.20	1.20	0.85	0.53	0.77	1.10	0.34	0.53	1.71	0.84	0.89	1.69	1.98	0.89	0.25	0.30	1.41	2.08	2.56	4.20	0.37
3	450834	Transcript	0	4.20	7.64	7.32	29.90	10.63	0.97	2.04	3.00	4.68	2.41	4.88	3.21	3.91	1.24	7.31	3.69	4.73	8.48	1.44	5.96	1.46	3.71	0.34	1.91	2.55	3.88	3.15	18.22	7.65
4	441257	Transcript	0	25.16	13.59	60.66	100.42	33.97	15.86	39.42	58.99	34.58	28.51	27.09	62.24	25.80	17.28	21.85	26.52	56.34	41.01	28.72	28.02	29.98	13.77	16.61	10.90	27.22	37.12	36.06	90.67	37.72
5	422299	Transcript	0	14.90	4.51	26.39	37.42	5.82	5.41	14.81	10.81	8.95	10.00	2.59	15.91	7.21	7.90	12.03	20.44	28.72	38.42	10.43	28.21	14.02	9.77	9.72	5.33	7.12	22.42	16.60	22.80	10.46
6	424191	Transcript	0	8.64	13.97	2.74	0.00	3.38	5.82	14.52	3.58	14.81	10.96	6.59	7.66	11.57	5.12	17.65	8.25	5.67	9.75	12.09	7.03	5.62	16.48	6.80	4.07	10.28	22.34	4.28	15.74	2.96
7	ER1a	ExonRegion	0	4.21	1.34	11.48	2.41	4.07	1.15	4.20	1.04	0.54	2.40	0.50	1.05	1.53	1.20	0.67	1.06	2.16	1.67	1.78	3.39	1.92	1.78	0.50	0.60	0.88	4.16	1.15	8.39	0.75
8	E1_Da	NovelBoundary	0	0.00	0.00	1.22	0.00	6.93	3.53	0.00	0.00	0.00	0.00	0.00	3.40	0.00	0.00	8.37	0.00	1.31	4.62	8.09	0.00	0.00	0.00	0.00	2.63	0.00	2.06	0.00	0.00	0.00
9	E1a_E3a	KnownJunction	0	0.00	0.00	13.50	9.71	0.00	1.92	0.00	0.00	1.86	0.00	1.20	0.00	0.00	1.00	0.00	0.00	1.26	0.00	0.00	0.00	2.05	0.00	0.00	0.00	1.93	0.00	3.98	0.00	0.00
10	E1a_E4a	NovelJunction	0	7.67	3.88	2.72	0.00	7.07	0.00	2.92	0.00	0.00	0.00	0.00	1.81	0.00	0.00	0.00	0.00	1.26	0.00	8.09	4.13	0.00	4.33	0.00	0.00	1.70	2.19	10.83	2.29	1.95
11	I1	Intron	0	2.08	3.13	1.62	6.96	0.00	0.67	0.00	0.89	0.00	1.40	0.58	2.10	0.00	1.32	0.00	4.15	0.00	3.74	6.21	1.34	2.08	0.88	0.88	0.00	2.08	0.00	0.00	2.38	0.00
12	I1_AR1	ActiveIntronRegion	0	2.17	3.39	1.68	7.54	0.00	0.72	0.00	0.97	0.00	1.52	0.63	2.27	0.00	1.40	0.00	4.49	0.00	4.05	6.72	1.45	2.25	0.95	0.95	0.00	2.25	0.00	0.00	2.57	0.00
13	E2_Aa	NovelBoundary	0	3.01	4.85	2.72	73.98	40.53	0.00	0.00	0.00	0.00	0.00	1.61	6.33	3.31	0.00	0.00	3.67	5.83	19.26	0.00	4.13	2.05	0.00	0.00	0.00	1.89	2.02	0.00	4.27	5.05
14	E2_Ab	NovelBoundary	0	24.95	10.47	25.41	188.30	134.84	7.02	16.19	25.28	13.03	3.04	10.91	14.58	11.02	7.09	0.00	33.28	30.09	13.87	0.00	25.55	15.00	12.25	14.23	2.57	3.26	26.74	13.32	46.14	38.23
15	ER2a	ExonRegion	1	10.24	13.50	19.32	86.94	28.78	1.83	4.48	9.00	6.87	4.01	10.98	6.46	9.67	2.72	18.05	9.28	9.24	20.92	0.00	10.93	1.90	8.41	0.00	1.91	5.24	9.60	9.36	54.15	21.92
16	ER2b	ExonRegion	0	29.95	28.14	118.21	422.06	80.98	32.97	106.18	107.23	69.86	45.32	30.88	45.65	22.93	13.80	38.14	55.54	68.31	76.20	19.14	44.21	51.95	44.68	46.11	14.16	51.96	92.22	73.01	367.33	82.29
17	E2_Ac	KnownBoundary	1	18.58	41.40	147.62	338.42	49.81	42.40	87.02	108.74	100.68	43.14	20.37	40.21	15.64	10.81	8.17	51.71	101.56	27.74	32.37	24.31	62.69	36.61	43.49	7.30	43.68	57.16	60.03	300.46	61.17
18	E2_Ad	KnownBoundary	0	35.33	13.77	58.03	60.83	22.11	19.07	118.21	144.27	33.01	26.36	12.81	34.85	17.90	6.00	18.34	10.79	54.74	27.74	0.00	30.76	23.67	27.52	25.86	2.81	19.32	81.02	14.21	157.35	49.75
19	ER2c	ExonRegion	0	33.48	28.78	141.81	195.00	38.90	33.19	150.03	167.19	79.23	41.18	19.33	52.01	19.49	11.96	15.20	31.33	94.97	33.79	17.67	32.12	49.86	42.06	37.37	6.97	41.31	97.96	39.25	284.25	68.45
20	ER2d	ExonRegion	0	29.41	10.77	69.91	56.47	11.21	13.36	72.12	89.75	32.39	17.45	14.18	32.43	15.66	8.82	5.91	14.20	48.64	30.48	7.17	25.61	17.43	21.28	14.06	6.27	15.92	57.36	12.06	110.34	39.63
21	E2_Da	KnownBoundary	0	16.04	3.49	8.20	19.41	0.00	3.91	0.00	11.10	2.98	7.55	3.23	9.82	7.58	5.10	0.00	13.16	6.39	28.38	16.18	28.28	5.94	4.42	8.52	3.05	1.63	4.21	4.77	4.13	4.59
22	E2a_E3a	KnownJunction	1	13.15	0.00	11.76	19.20	0.00	3.18	5.09	28.27	10.20	3.79	3.83	13.67	3.57	2.19	0.00	6.96	14.97	18.49	0.00	4.05	2.05	2.24	0.00	0.00	5.53	12.36	0.00	30.73	17.53
23	E2a_E4a	KnownJunction	0	0.00	0.00	1.10	0.00	0.00	0.00	2.35	0.00	0.00	0.00	0.00	1.20	1.21	0.00	0.00	2.83	1.40	0.00	0.00	0.00	0.00	4.76	0.00	3.05	1.44	7.85	0.00	12.63	1.85
24	E2a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
25	ER2e	ExonRegion	0	14.90	4.51	26.39	37.42	5.82	5.41	14.81	10.81	8.95	10.00	2.59	15.91	7.21	7.90	12.03	20.44	28.72	38.42	10.43	28.21	14.02	9.77	9.72	5.33	7.12	22.42	16.60	22.80	10.46
26	E2_Db	NovelBoundary	1	19.52	3.68	126.12	136.53	0.00	8.67	7.09	25.63	19.64	16.90	4.27	30.96	7.96	14.80	8.37	36.03	60.01	32.36	32.37	26.96	12.71	8.80	12.12	15.61	18.15	26.74	39.36	34.24	21.69
27	E2b_E3a	NovelJunction	0	0.00	0.00	2.99	0.00	0.00	0.00	0.00	0.00	1.83	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
28	I2	Intron	0	4.46	3.35	6.96	59.70	15.25	4.29	11.54	6.71	9.64	2.25	4.34	12.86	3.38	6.83	13.37	10.33	9.31	27.24	3.33	12.50	8.17	4.69	10.35	4.48	5.95	15.54	5.72	21.21	5.23
29	I2_AR1	ActiveIntronRegion	0	4.55	3.42	7.11	60.94	15.57	4.37	11.78	6.83	9.84	2.30	4.40	13.13	3.45	6.97	13.65	10.54	9.51	27.80	3.39	12.77	8.34	4.79	10.57	4.57	6.07	15.86	5.84	21.65	5.34
30	E3_Aa	NovelBoundary	0	31.79	0.00	35.70	192.18	19.90	5.33	21.91	31.65	12.42	19.65	4.08	35.93	15.92	22.67	24.91	24.86	46.19	52.27	24.28	37.79	25.79	14.29	12.02	24.64	22.84	26.86	2.09	23.14	27.14
31	ER3a	ExonRegion	0	46.53	17.49	42.47	95.06	10.41	15.21	38.53	123.04	54.16	27.19	16.81	45.89	34.31	26.82	34.99	37.79	50.30	60.78	23.24	52.23	34.28	31.90	24.75	23.03	43.54	50.66	21.51	73.92	37.49
32	E3_Da	KnownBoundary	0	61.99	38.10	71.75	56.30	21.52	42.36	82.45	218.17	119.10	59.96	17.02	86.53	38.63	32.84	62.39	68.70	112.32	107.75	64.74	60.54	73.04	63.59	39.99	21.65	73.61	93.34	18.14	179.05	95.90
33	ER3b	ExonRegion	0	37.18	27.18	109.57	181.65	67.94	28.53	73.74	89.72	58.96	53.22	50.35	110.81	48.03	32.36	43.70	46.07	97.71	63.52	57.43	51.99	57.92	25.31	33.22	21.80	48.90	61.88	72.13	150.61	57.91
34	E3_Db	NovelBoundary	0	29.73	58.36	58.60	119.71	48.19	24.17	47.43	34.84	111.49	63.27	66.78	164.52	66.46	36.00	70.96	58.98	127.58	94.78	129.48	88.74	73.24	28.39	10.69	31.58	42.96	32.27	92.34	82.49	74.87
35	I3	Intron	0	5.15	15.43	12.95	37.49	21.14	11.46	10.77	4.17	32.54	11.86	13.19	27.67	11.24	7.97	10.97	16.07	26.34	15.86	21.14	19.85	16.25	3.35	4.92	8.80	9.61	6.18	23.18	18.68	11.59
36	I3_AR1	ActiveIntronRegion	0	15.66	42.69	41.51	123.67	68.83	36.82	34.77	13.80	104.81	36.15	42.76	89.37	36.51	24.46	33.96	51.29	82.07	49.59	68.47	63.56	51.63	10.93	15.94	27.80	30.85	19.95	76.63	59.99	38.18
37	E4_Aa	NovelBoundary	0	0.00	4.85	0.00	0.00	0.00	0.00	0.00	1.89	3.14	1.52	1.20	1.87	0.00	0.00	0.00	0.00	3.87	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.74	0.00	0.00	3.91	0.00
38	ER4a	ExonRegion	0	14.25	14.58	4.26	0.00	10.13	12.09	24.45	8.26	24.62	15.93	7.72	11.49	16.73	8.46	30.23	7.47	11.84	19.99	20.09	21.09	14.95	26.89	13.25	6.12	16.27	40.62	10.45	24.61	5.69
39	E4_Da	NovelBoundary	0	123.75	242.28	732.92	100.30	70.74	159.84	214.21	168.86	580.73	441.40	236.66	352.19	637.49	461.88	79.13	268.51	1028.76	36.86	0.00	55.33	211.58	103.41	284.66	359.49	261.03	262.72	204.65	578.81	436.54
40	E4a_E5a	KnownJunction	0	11.68	27.34	2.87	0.00	0.00	5.37	16.76	2.49	19.82	16.94	12.05	10.27	16.78	6.89	22.72	14.46	3.76	9.25	16.18	0.00	1.93	17.79	7.14	3.05	13.15	18.54	2.39	9.97	1.35
41	I4	Intron	0	0.27	4.80	0.75	0.00	0.00	0.09	0.52	0.00	4.72	0.83	0.23	0.71	1.45	0.58	1.29	0.79	1.72	0.88	0.41	1.54	0.09	0.00	0.23	0.69	1.28	0.20	0.00	0.94	0.43
42	I4_SR1	SilentIntronRegion	0	0.27	4.81	0.75	0.00	0.00	0.09	0.52	0.00	4.73	0.83	0.23	0.71	1.45	0.58	1.29	0.79	1.72	0.88	0.41	1.54	0.09	0.00	0.23	0.69	1.28	0.20	0.00	0.94	0.43
43	E5_Aa	NovelBoundary	0	0.00	8.53	0.00	0.00	6.19	0.00	0.00	0.00	1.83	0.00	0.00	0.00	0.00	1.37	0.00	0.00	0.88	8.99	16.18	0.00	0.00	4.08	0.00	0.00	1.59	0.00	0.00	0.00	0.00
44	ER5a	ExonRegion	0	17.24	26.96	47.84	34.28	36.93	5.13	71.52	5.25	48.72	15.51	13.10	32.06	30.32	8.72	19.01	20.14	17.91	16.17	16.12	21.91	10.30	23.57	20.94	11.90	28.62	114.82	38.54	104.66	6.06
45	E5_Da	KnownBoundary	0	7.55	34.81	7.45	0.00	14.15	0.00	2.17	0.00	6.52	3.52	10.98	4.82	5.95	3.32	34.48	6.96	5.45	4.62	24.28	3.56	0.00	9.09	4.38	7.96	4.81	2.19	2.14	4.09	0.00
46	ER5b	ExonRegion	0	2.35	9.42	2.64	2.77	3.09	1.06	1.65	0.00	7.16	3.23	3.65	3.18	2.07	0.99	3.88	1.78	4.96	4.52	4.32	6.95	2.48	2.70	1.03	3.82	2.40	2.02	0.08	0.51	1.03