Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	HCFC1	Gene	0	89.23	93.15	97.56	83.83	240.34	59.52	92.60
2	310441	Transcript	0	0	0	0	0	0	0	0
3	354233	Transcript	0	0.00	0.00	1.77	0.00	7.08	0.00	0.00
4	369984	Transcript	0	20.52	19.24	24.22	21.61	33.42	16.23	17.72
5	IG51	Intergenic	0	2.43	7.36	2.59	5.42	8.48	3.14	1.75
6	IG51_AR1	ActiveIntergenicRegion	0	2.46	7.48	2.65	5.51	8.65	3.20	1.79
7	ER1a	ExonRegion	0	7.41	13.49	6.78	20.58	12.53	10.78	3.71
8	E1_Ab	KnownBoundary	0	8.90	20.57	12.66	28.26	35.22	18.68	7.61
9	ER1b	ExonRegion	0	29.48	54.02	39.62	48.35	72.11	25.82	28.30
10	E1a_E2a	KnownJunction	0	55.31	61.95	68.43	73.06	191.11	44.27	69.26
11	ER2a	ExonRegion	0	60.41	74.11	71.68	64.01	128.81	31.70	50.91
12	E2a_E3a	KnownJunction	0	69.03	63.39	82.05	60.22	121.35	45.18	57.43
13	ER3a	ExonRegion	0	75.15	74.95	105.34	82.20	176.42	42.47	63.67
14	E3a_E4a	KnownJunction	0	98.29	76.98	128.96	107.71	286.73	51.78	91.38
15	ER4a	ExonRegion	0	89.52	82.27	106.62	82.68	235.77	43.67	78.30
16	E4a_E5a	KnownJunction	0	103.28	105.74	117.59	77.81	306.07	41.91	99.16
17	ER5a	ExonRegion	0	99.54	99.29	107.24	73.95	256.01	30.62	95.67
18	E5a_E6a	KnownJunction	1	63.66	90.56	83.64	73.42	270.48	15.25	80.94
19	E5a_E7a	NovelJunction	1	16.94	15.76	21.11	25.06	1.98	34.30	12.38
20	ER6a	ExonRegion	1	59.92	79.14	87.97	60.55	255.60	20.05	107.66
21	E6a_E7a	KnownJunction	1	58.21	69.75	83.02	62.85	247.75	16.94	121.92
22	I6_SR2	SilentIntronRegion	1	22.22	7.78	16.38	4.64	3.17	0.40	0.89
23	E7_Aa	NovelBoundary	1	37.25	13.98	26.57	6.20	3.11	3.32	2.68
24	ER7a	ExonRegion	0	84.57	98.08	103.16	90.30	273.07	46.74	112.02
25	E7a_E8a	KnownJunction	0	115.76	112.02	152.76	112.92	344.66	85.28	127.46
26	E8_Aa	NovelBoundary	1	30.81	3.18	38.53	1.38	0.00	0.00	1.32
27	ER8a	ExonRegion	0	94.31	108.10	117.36	93.18	303.58	61.76	100.11
28	E8_Da	KnownBoundary	0	90.54	103.88	94.33	95.31	192.26	43.58	80.18
29	E8a_E8b	KnownJunction	0	0.00	0.00	1.77	0.00	7.08	0.00	0.00
30	ER8b	ExonRegion	0	69.52	94.12	70.35	81.44	185.73	38.85	86.32
31	E8_Ab	KnownBoundary	0	116.10	78.97	90.10	60.93	300.06	27.23	111.58
32	ER8c	ExonRegion	0	91.25	75.16	79.56	56.60	252.80	35.91	90.91
33	E8b_E9a	KnownJunction	0	96.57	85.20	91.48	68.43	238.16	38.81	98.56
34	ER9a	ExonRegion	0	79.45	85.61	90.08	75.87	240.99	45.89	94.11
35	E9_Da	NovelBoundary	1	31.33	0.00	29.89	4.58	1.04	0.00	0.00
36	E9a_E10a	KnownJunction	0	80.40	62.79	77.14	66.92	244.11	27.01	81.62
37	E9a_E11a	NovelJunction	1	4.11	11.64	7.42	34.16	1.91	15.97	12.73
38	ER10a	ExonRegion	0	54.42	57.85	68.23	64.58	229.53	28.22	70.42
39	E10_Da	NovelBoundary	0	10.53	17.50	14.83	22.70	68.03	11.90	20.25
40	E10a_E11a	KnownJunction	0	32.40	62.58	51.86	65.86	188.57	38.73	60.48
41	ER11a	ExonRegion	0	72.01	94.84	108.79	89.95	249.28	46.80	109.10
42	E11a_E12a	KnownJunction	0	81.41	100.67	122.77	91.00	380.49	40.36	113.26
43	ER12a	ExonRegion	0	118.43	104.43	159.89	77.80	295.80	45.26	134.22
44	E12a_E13a	KnownJunction	0	88.49	97.10	120.29	74.99	171.72	42.69	113.00
45	ER13a	ExonRegion	0	111.00	96.44	130.43	88.15	265.30	48.30	130.00
46	E13a_E14a	KnownJunction	0	102.99	104.67	143.24	84.61	233.23	58.50	154.59
47	ER14a	ExonRegion	0	111.29	125.04	150.12	86.07	277.65	62.31	139.44
48	E14a_E15a	KnownJunction	0	102.86	105.72	134.15	70.27	329.13	61.43	113.09
49	E14a_E16a	NovelJunction	0	7.29	5.04	3.75	10.94	0.95	4.10	5.96
50	E15_Aa	NovelBoundary	1	37.35	7.38	51.83	11.49	1.13	0.00	4.72
51	ER15a	ExonRegion	0	88.96	117.27	117.52	78.48	370.07	56.60	135.36
52	E15_Da	NovelBoundary	1	39.40	0.00	38.08	2.74	0.00	0.00	1.45
53	E15a_E16a	KnownJunction	0	130.78	121.64	131.14	82.95	294.94	63.78	164.84
54	ER16a	ExonRegion	0	108.25	129.66	113.29	92.42	366.83	61.09	156.33
55	E16a_E17a	KnownJunction	0	96.25	105.85	92.89	61.44	463.32	36.50	131.68
56	I16	Intron	0	14.11	7.82	27.37	15.78	10.28	5.32	8.29
57	I16_AR2	ActiveIntronRegion	1	14.79	8.74	30.66	17.79	11.52	6.30	8.97
58	E17_Aa	NovelBoundary	0	14.40	11.11	19.72	13.87	5.53	17.23	7.60
59	ER17a	ExonRegion	0	75.18	111.15	87.46	100.12	229.80	62.82	108.48
60	E17a_E18a	KnownJunction	0	70.90	99.20	81.47	93.22	204.43	54.24	72.62
61	ER18a	ExonRegion	0	59.39	114.97	81.98	94.40	179.49	60.46	79.65
62	E18a_E19a	KnownJunction	0	19.46	18.52	28.37	32.32	19.36	11.82	13.69
63	E18a_E19b	KnownJunction	0	39.91	74.56	55.96	53.91	115.75	43.20	59.45
64	ER19a	ExonRegion	0	26.80	24.05	31.98	23.78	46.95	22.82	21.53
65	E19_Ab	KnownBoundary	0	32.23	16.81	34.76	14.71	31.44	18.44	16.25
66	ER19b	ExonRegion	0	62.18	86.61	71.43	74.15	164.97	61.46	86.55
67	E19a_E20a	KnownJunction	0	6.78	12.93	8.42	9.54	15.54	9.43	12.22
68	E19a_E20b	KnownJunction	0	103.08	94.68	99.54	82.22	90.14	51.08	94.62
69	ER20a	ExonRegion	0	30.16	35.84	28.79	32.11	43.12	20.84	32.72
70	ER20b	ExonRegion	0	70.17	106.47	82.40	100.59	259.88	69.91	99.17
71	E20a_E21a	KnownJunction	0	90.34	115.28	102.72	93.41	380.23	77.67	102.74
72	ER21a	ExonRegion	0	60.89	106.72	86.97	105.18	292.29	71.77	97.39
73	E21a_E22a	KnownJunction	0	109.74	146.73	158.27	150.11	422.33	101.01	183.24
74	ER22a	ExonRegion	0	141.30	157.76	165.44	140.28	387.37	89.40	140.31
75	E22a_E23a	KnownJunction	0	162.28	143.94	196.18	148.54	388.88	87.58	131.43
76	E22a_E24a	NovelJunction	1	1.74	0.00	1.65	9.43	0.00	9.62	3.67
77	E23_Aa	NovelBoundary	0	18.18	13.61	4.48	9.32	0.00	19.16	2.01
78	ER23a	ExonRegion	0	161.90	143.61	201.31	124.49	430.07	99.94	133.97
79	E23a_E24a	KnownJunction	0	219.04	137.61	259.17	118.77	416.56	88.01	162.66
80	ER24a	ExonRegion	0	103.84	128.80	129.13	109.13	294.86	83.41	119.35
81	E24a_E25a	KnownJunction	0	102.94	112.47	94.30	107.77	197.52	92.33	110.18
82	ER25a	ExonRegion	0	82.05	98.78	77.16	80.20	139.56	65.07	84.02
83	E25a_E26a	KnownJunction	0	65.96	76.00	60.30	56.97	126.31	50.62	71.64
84	ER26a	ExonRegion	0	137.92	83.08	118.64	82.27	297.14	83.04	86.27
85	ER26b	ExonRegion	1	19.40	4.86	23.54	10.29	42.11	16.24	8.43