Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	ZMAT1	Gene	0	16.25	3.64	5.17	1.38	11.07	3.14	0.37
2	354826	Transcript	0	7.06	1.17	2.25	0.93	3.29	1.70	0.03
3	372782	Transcript	0	6.87	1.51	2.44	0.76	11.03	1.63	1.14
4	ER1a	ExonRegion	0	0.75	0.08	0.20	0.30	0.20	0.07	0.00
5	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
6	E1a_E3a	KnownJunction	0	6.08	1.29	1.94	0.00	3.25	1.10	0.00
7	E2_Aa	NovelBoundary	0	223.85	197.96	163.41	151.06	107.22	138.13	113.16
8	ER2a	ExonRegion	0	19.38	5.21	6.93	3.12	45.06	6.06	5.46
9	E2_Da	NovelBoundary	0	1066.20	1073.77	717.15	716.67	336.09	689.34	582.76
10	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
11	ER3a	ExonRegion	0	8.91	3.43	4.48	0.64	4.23	2.78	0.00
12	E3a_E4a	KnownJunction	0	11.90	5.57	7.54	1.41	6.22	2.47	0.00
13	ER4a	ExonRegion	0	17.77	6.44	7.39	0.26	7.55	6.35	0.00
14	E4a_E5a	KnownJunction	0	19.03	6.73	7.67	0.00	7.40	5.04	0.00
15	ER5a	ExonRegion	0	17.96	5.62	5.75	1.87	8.14	6.41	0.00
16	E5a_E6a	KnownJunction	0	8.18	4.39	3.56	1.68	5.90	4.98	0.00
17	E5a_E10a	KnownJunction	0	0.00	0.00	0.00	0.00	0.92	0.00	0.00
18	ER6a	ExonRegion	0	15.70	2.73	3.84	1.72	6.36	4.25	0.00
19	E6a_E7a	KnownJunction	0	23.32	0.00	6.27	1.46	5.62	2.63	0.00
20	E7_Aa	NovelBoundary	0	16.97	0.00	6.65	0.00	0.00	0.00	0.00
21	ER7a	ExonRegion	0	14.47	3.27	5.11	1.53	3.66	3.19	0.34
22	E7_Da	NovelBoundary	0	14.42	2.68	5.98	4.01	4.15	1.26	0.00
23	E7a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
24	I7_AR1	ActiveIntronRegion	0	12.04	1.94	4.19	0.53	2.73	1.38	0.00
25	I7_SR2	SilentIntronRegion	0	12.08	0.50	3.13	1.79	1.85	1.69	0.00
26	I7_AR4	ActiveIntronRegion	0	10.74	0.87	3.38	0.88	3.68	0.94	0.00
27	ER8a	ExonRegion	0	0.00	0.00	0.00	0.70	1.52	0.00	0.00
28	E8_Da	NovelBoundary	0	11.83	1.13	3.91	0.00	5.95	1.66	0.00
29	E8a_E9a	KnownJunction	0	0.00	0.00	0.00	1.60	0.00	0.00	0.00
30	I8_AR2	ActiveIntronRegion	0	10.52	0.00	4.52	0.00	4.89	0.45	0.35
31	ER9a	ExonRegion	0	2.10	0.00	1.74	0.56	4.34	0.87	0.00
32	E9a_E10a	KnownJunction	0	0.72	0.00	0.00	0.00	2.24	0.00	0.00
33	E10_Aa	NovelBoundary	0	3.76	1.18	2.26	0.00	8.23	1.02	0.00
34	ER10a	ExonRegion	0	18.76	5.03	6.80	0.46	12.62	3.60	0.40
35	E10a_E11a	KnownJunction	0	38.10	7.88	15.68	1.68	19.99	5.55	0.67
36	ER11a	ExonRegion	0	24.22	5.96	6.44	2.45	17.97	4.33	0.28
37	E11_Da	KnownBoundary	0	17.24	2.23	2.82	2.55	10.79	3.14	1.69
38	ER11b	ExonRegion	0	14.96	2.34	5.29	0.70	9.18	2.09	0.25