Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	BRWD3	Gene	0	65.46	40.97	53.27	38.89	131.00	41.81	26.52
2	373275	Transcript	0	63.74	38.71	51.50	35.30	123.57	34.56	25.19
3	ER1a	ExonRegion	0	3.22	5.75	1.99	4.53	4.94	3.43	1.40
4	E1a_E2a	KnownJunction	0	15.10	5.23	6.18	12.08	21.53	15.12	6.84
5	ER2a	ExonRegion	0	10.69	16.43	8.01	14.20	27.48	12.65	7.79
6	E2a_E3a	KnownJunction	0	2.42	18.97	8.18	11.16	27.89	8.66	5.59
7	E3a_E4a	KnownJunction	0	8.50	22.54	5.68	13.30	27.66	15.17	4.16
8	ER3a	ExonRegion	0	6.99	25.23	10.21	15.67	29.75	14.59	6.90
9	ER4a	ExonRegion	0	20.91	25.21	16.97	18.77	36.08	26.20	9.07
10	E4a_E5a	KnownJunction	0	28.17	18.05	26.56	20.94	57.59	28.89	13.11
11	ER5a	ExonRegion	0	38.49	31.14	34.40	38.52	71.25	23.42	17.35
12	E5a_E6a	KnownJunction	0	41.32	30.55	44.13	40.45	78.31	23.32	21.78
13	ER6a	ExonRegion	0	49.99	46.68	47.90	44.63	79.98	30.51	19.33
14	E6_Da	NovelBoundary	0	5.01	2.23	1.58	10.81	2.17	1.34	0.83
15	E6a_E7a	KnownJunction	0	41.11	38.86	41.69	27.23	105.81	18.01	16.48
16	ER7a	ExonRegion	0	44.78	36.47	41.84	36.46	82.07	24.59	19.96
17	E7a_E8a	KnownJunction	0	50.14	31.76	48.28	35.52	60.49	26.77	15.02
18	ER8a	ExonRegion	0	48.36	33.55	45.11	37.15	81.35	29.16	21.81
19	E8a_E9a	KnownJunction	0	47.97	37.25	37.10	24.38	72.89	24.07	25.57
20	ER9a	ExonRegion	0	57.37	43.73	51.72	37.08	99.90	20.67	25.54
21	E9a_E10a	KnownJunction	0	72.87	46.37	61.62	45.95	88.82	27.36	22.97
22	E10_Aa	NovelBoundary	1	30.91	3.10	23.34	0.00	3.09	0.00	0.89
23	ER10a	ExonRegion	0	62.62	32.84	47.17	27.77	103.12	19.22	33.79
24	E10a_E11a	KnownJunction	1	52.39	41.64	38.81	22.30	121.86	17.61	34.78
25	ER11a	ExonRegion	0	58.52	31.47	49.96	33.38	116.14	19.97	28.27
26	E11a_E12a	KnownJunction	0	58.18	22.15	46.32	33.73	125.85	20.61	21.38
27	ER12a	ExonRegion	0	52.76	26.16	38.66	17.31	93.31	16.84	21.19
28	E12a_E13a	KnownJunction	1	34.82	24.20	28.31	2.98	75.45	13.48	18.97
29	I12_AR1	ActiveIntronRegion	1	2.66	4.97	6.28	5.15	13.00	3.75	9.06
30	ER13a	ExonRegion	0	66.07	38.88	53.91	20.07	108.03	24.98	30.16
31	E13a_E14a	KnownJunction	0	63.47	42.74	48.74	25.01	102.38	30.39	26.01
32	ER14a	ExonRegion	0	88.92	42.86	62.23	35.34	129.46	35.37	32.37
33	E14a_E15a	KnownJunction	0	89.24	45.34	71.02	49.96	137.16	34.12	27.96
34	ER15a	ExonRegion	0	90.85	37.00	61.67	41.51	145.08	26.13	25.35
35	E15a_E16a	KnownJunction	0	113.66	31.34	73.71	40.01	168.68	27.87	30.05
36	ER16a	ExonRegion	0	105.92	51.07	76.84	55.04	152.54	34.99	26.45
37	E16a_E17a	KnownJunction	0	116.40	62.82	78.46	48.57	131.36	32.35	26.48
38	ER17a	ExonRegion	0	72.10	43.17	58.50	38.77	128.10	31.27	26.27
39	E17a_E18a	KnownJunction	0	52.89	47.47	52.94	45.81	95.60	34.06	27.77
40	ER18a	ExonRegion	0	49.02	47.54	46.09	40.91	98.71	24.25	30.64
41	E18a_E19a	KnownJunction	0	43.66	53.54	53.18	49.06	118.88	26.45	23.90
42	ER19a	ExonRegion	0	67.51	47.61	45.80	49.65	163.65	29.82	29.86
43	E19a_E20a	KnownJunction	0	136.52	46.03	73.92	59.38	233.16	41.75	44.67
44	ER20a	ExonRegion	0	160.65	57.41	74.67	72.05	261.19	57.93	39.07
45	E20a_E21a	KnownJunction	0	157.67	48.55	77.07	53.13	282.54	58.42	39.76
46	ER21a	ExonRegion	0	158.88	48.21	74.49	63.23	279.97	60.57	48.78
47	E21a_E22a	KnownJunction	0	83.20	38.49	43.86	41.91	197.79	50.95	30.00
48	ER22a	ExonRegion	0	70.70	32.19	53.89	34.54	159.27	35.60	31.38
49	E22a_E23a	KnownJunction	0	69.71	34.49	69.16	22.19	139.15	30.44	38.68
50	ER23a	ExonRegion	0	62.91	46.81	67.35	30.61	138.97	45.22	35.86
51	E23a_E24a	KnownJunction	0	61.20	46.68	64.74	31.86	98.99	25.43	20.39
52	ER24a	ExonRegion	0	53.00	42.02	65.63	36.38	122.30	44.67	29.29
53	E24a_E25a	KnownJunction	0	50.17	44.85	53.18	46.57	129.30	39.88	26.18
54	ER25a	ExonRegion	0	66.44	45.14	72.87	36.40	132.07	46.53	26.72
55	E25a_E26a	KnownJunction	0	54.64	45.63	69.98	37.58	114.60	47.62	33.23
56	ER26a	ExonRegion	0	76.23	48.45	72.84	39.57	149.84	42.94	26.92
57	E26a_E27a	KnownJunction	0	76.94	50.44	72.54	34.60	139.86	42.93	27.06
58	ER27a	ExonRegion	0	62.44	41.89	67.20	36.52	132.68	47.61	25.35
59	E27a_E28a	KnownJunction	0	66.98	28.50	65.20	32.35	130.02	54.32	22.16
60	ER28a	ExonRegion	0	62.81	29.77	61.63	31.93	122.37	45.99	21.45
61	E28a_E29a	KnownJunction	0	42.24	34.02	65.59	29.72	101.99	59.52	25.68
62	ER29a	ExonRegion	0	62.37	38.72	55.01	31.86	120.04	42.08	28.33
63	E29a_E30a	KnownJunction	0	75.22	37.20	42.98	35.98	153.72	30.58	22.53
64	ER30a	ExonRegion	0	75.86	47.94	53.29	36.52	164.76	35.36	30.47
65	E30a_E31a	KnownJunction	0	127.83	62.87	67.94	37.01	193.34	43.34	37.69
66	ER31a	ExonRegion	0	85.96	62.08	55.24	40.74	149.39	44.76	35.52
67	E31a_E32a	KnownJunction	0	98.69	61.24	71.48	45.70	161.25	43.31	29.29
68	E32_Aa	NovelBoundary	1	48.62	0.00	38.81	0.00	47.00	0.00	0.00
69	ER32a	ExonRegion	0	70.03	40.82	47.20	31.77	162.45	42.31	26.66
70	E32a_E33a	KnownJunction	0	62.80	29.87	46.98	18.21	144.24	24.76	23.30
71	ER33a	ExonRegion	0	61.35	30.43	50.92	30.76	128.94	48.06	23.51
72	E33a_E34a	KnownJunction	0	45.78	27.85	47.49	35.65	141.08	47.44	22.00
73	ER34a	ExonRegion	0	37.91	42.69	43.90	34.70	108.34	39.86	19.33
74	E34_Da	NovelBoundary	0	3.45	1.02	5.52	10.84	0.00	8.20	0.87
75	E34a_E35a	KnownJunction	0	28.56	49.55	36.89	30.21	89.68	31.30	12.61
76	ER35a	ExonRegion	0	45.46	46.68	47.84	39.45	124.92	38.60	19.92
77	E35a_E36a	KnownJunction	0	51.84	60.42	56.86	32.10	132.88	35.40	18.09
78	ER36a	ExonRegion	0	55.92	45.21	53.78	41.68	127.63	41.37	22.29
79	E36a_E37a	KnownJunction	0	58.68	31.39	42.29	43.64	146.48	38.99	20.45
80	ER37a	ExonRegion	0	68.57	28.06	57.87	31.28	138.88	35.16	24.83
81	E37_Da	NovelBoundary	1	13.77	4.54	14.38	5.80	0.00	6.41	0.62
82	E37a_E38a	KnownJunction	0	63.69	15.63	41.63	20.35	140.53	28.30	31.47
83	I37	Intron	0	14.96	2.14	15.22	3.36	3.71	2.29	1.81
84	I37_SR1	SilentIntronRegion	0	15.00	2.14	15.26	3.36	3.72	2.29	1.82
85	E38_Aa	NovelBoundary	1	22.30	3.10	20.41	6.53	6.89	1.66	0.89
86	ER38a	ExonRegion	0	70.17	29.44	66.19	39.63	154.80	42.81	36.29
87	E38a_E39a	KnownJunction	0	74.99	44.48	63.27	45.30	138.22	41.16	36.76
88	E39_Aa	NovelBoundary	1	45.78	0.00	36.06	2.79	0.00	6.57	0.00
89	ER39a	ExonRegion	0	86.39	48.12	71.10	52.59	177.04	60.94	42.31
90	E39a_E40a	KnownJunction	0	68.70	41.80	63.88	51.61	151.53	52.72	31.57
91	ER40a	ExonRegion	0	60.03	28.81	48.56	36.87	127.04	42.42	20.55
92	E40a_E41a	KnownJunction	0	55.44	39.20	42.90	40.75	135.83	43.87	20.44
93	ER41a	ExonRegion	0	70.23	51.79	60.04	49.53	160.97	74.14	29.50
94	IG38_AR4	ActiveIntergenicRegion	0	32.91	15.73	33.19	15.67	82.44	27.48	14.12
95	IG38_SR4	SilentIntergenicRegion	0	8.99	0.00	9.12	3.25	13.40	10.16	2.24
96	IG38_AR3	ActiveIntergenicRegion	0	5.02	2.20	6.11	3.00	7.33	9.56	1.73