Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	JARID1C	Gene	0	172.26	424.31	258.66	567.72	134.57	344.56	161.62
2	375379	Transcript	0	0	0	0	0	0	0	0
3	375383	Transcript	1	5.26	52.31	38.18	102.62	0.88	75.36	2.61
4	375401	Transcript	0	0	0	0	0	0	0	0
5	349663	Transcript	0	0.00	0.00	0.13	0.00	0.08	0.00	0.00
6	404049	Transcript	0	92.06	169.24	151.28	243.47	25.87	175.75	63.16
7	ER1a	ExonRegion	0	1.67	3.33	5.25	8.35	1.18	4.24	0.70
8	E1_Ab	KnownBoundary	0	6.33	5.62	9.93	2.63	3.94	14.71	0.64
9	ER1b	ExonRegion	0	26.02	103.26	28.63	155.32	23.97	67.18	22.32
10	E1_Ac	KnownBoundary	0	117.90	306.51	108.47	399.02	56.16	165.78	82.10
11	ER1c	ExonRegion	0	117.78	413.30	153.30	457.95	59.80	297.05	86.36
12	E1a_E2a	KnownJunction	0	238.65	630.80	383.87	711.60	66.76	553.74	133.08
13	E1a_E3a	NovelJunction	0	3.24	5.49	3.33	9.37	0.92	10.56	0.69
14	E1a_E4a	NovelJunction	0	1.03	7.96	0.60	9.92	0.00	12.06	0.00
15	ER2a	ExonRegion	0	231.19	643.61	375.44	744.52	123.72	547.05	157.03
16	E2a_E3a	KnownJunction	0	267.34	548.15	405.13	635.23	172.07	499.82	179.30
17	E2a_E4a	KnownJunction	1	5.26	52.31	38.18	102.62	0.88	75.36	2.61
18	ER3a	ExonRegion	0	292.73	602.91	433.18	681.56	168.54	534.61	198.50
19	E3a_E4a	KnownJunction	0	246.93	607.68	421.88	730.89	216.81	513.94	212.82
20	ER4a	ExonRegion	0	348.07	764.38	512.05	1004.15	165.39	675.54	250.41
21	E4a_E5a	KnownJunction	0	284.28	742.09	459.00	971.76	120.15	596.40	239.01
22	E4a_E5b	KnownJunction	0	92.06	169.24	151.28	243.47	25.87	175.75	63.16
23	E5_Ab	NovelBoundary	1	146.45	2.68	198.50	1.22	0.00	1.13	0.79
24	ER5a	ExonRegion	0	311.79	758.37	491.27	998.51	130.99	616.06	254.49
25	ER5b	ExonRegion	0	280.51	654.51	466.97	839.23	206.41	512.25	223.12
26	E5a_E6a	KnownJunction	0	195.94	462.59	310.72	624.04	135.34	350.62	139.89
27	ER6a	ExonRegion	0	199.53	494.86	356.71	661.14	131.16	380.40	172.06
28	E6a_E7a	KnownJunction	0	196.86	446.77	373.44	682.26	169.99	389.40	171.05
29	ER7a	ExonRegion	0	280.34	636.83	440.14	884.60	225.50	428.75	229.98
30	E7_Da	NovelBoundary	1	57.16	123.21	30.01	144.64	0.00	59.15	1.65
31	E7a_E9a	KnownJunction	0	272.40	579.81	464.29	803.36	186.29	402.83	212.99
32	I7	Intron	1	64.21	108.99	40.02	105.43	0.88	39.58	1.52
33	I7_AR1	ActiveIntronRegion	1	37.01	64.17	28.51	75.05	0.83	23.37	0.56
34	I7_SR1	SilentIntronRegion	1	78.75	132.92	46.25	121.85	0.91	48.26	2.03
35	ER8a	ExonRegion	0	0.00	0.00	0.13	0.00	0.08	0.00	0.00
36	ER9a	ExonRegion	0	337.93	646.40	491.41	883.59	240.92	438.68	254.26
37	E9a_E10a	KnownJunction	0	357.60	573.72	489.30	731.95	276.13	436.89	217.67
38	ER10a	ExonRegion	0	324.66	564.92	510.45	764.86	241.06	455.18	244.34
39	E10a_E11a	KnownJunction	0	279.51	587.38	467.34	758.60	250.35	459.62	222.61
40	ER11a	ExonRegion	0	307.05	719.62	535.89	876.90	241.03	466.08	293.77
41	E11a_E12a	KnownJunction	0	279.32	708.70	482.12	982.00	245.42	567.78	304.33
42	E11a_E13a	NovelJunction	0	13.32	17.55	31.34	36.11	0.00	23.02	20.68
43	ER12a	ExonRegion	0	334.29	756.84	587.69	981.96	356.07	519.30	384.42
44	E12a_E13a	KnownJunction	0	275.80	680.96	513.94	945.91	219.79	486.39	340.89
45	ER13a	ExonRegion	0	317.05	704.92	539.82	934.13	300.64	508.14	386.80
46	E13a_E14a	KnownJunction	0	243.39	670.84	473.83	842.99	224.19	485.53	331.43
47	ER14a	ExonRegion	0	229.55	516.82	365.31	705.37	206.35	362.17	289.52
48	E14a_E15a	KnownJunction	0	202.60	495.45	307.88	649.35	165.04	316.26	250.48
49	ER15a	ExonRegion	0	266.38	471.15	360.35	714.43	225.90	353.12	273.74
50	E15a_E16a	KnownJunction	0	302.49	571.38	363.79	850.88	238.62	426.92	277.60
51	ER16a	ExonRegion	0	329.35	586.27	439.30	873.22	248.78	428.80	322.14
52	E16a_E17a	KnownJunction	0	268.94	533.99	352.40	764.57	212.62	423.54	244.90
53	ER17a	ExonRegion	0	192.96	422.36	325.91	652.78	192.47	326.92	203.21
54	E17_Da	NovelBoundary	0	62.14	123.08	83.61	110.88	16.81	86.97	28.10
55	E17a_E18a	KnownJunction	0	135.16	363.28	281.51	553.85	136.52	287.11	171.88
56	E18_Aa	NovelBoundary	1	32.58	90.95	74.02	86.31	6.29	40.20	12.34
57	ER18a	ExonRegion	0	175.28	465.22	310.24	633.64	144.14	305.50	170.77
58	E18a_E19a	KnownJunction	0	128.16	414.38	250.69	542.12	105.17	279.25	132.51
59	ER19a	ExonRegion	0	174.81	483.70	303.51	673.48	146.65	348.16	174.67
60	E19a_E20a	KnownJunction	0	198.54	467.92	323.30	699.25	166.44	317.55	211.70
61	ER20a	ExonRegion	0	161.39	534.21	242.13	739.05	158.94	419.78	214.00
62	E20a_E21a	KnownJunction	0	176.15	588.19	215.71	860.41	77.43	495.13	206.56
63	ER21a	ExonRegion	0	208.23	571.61	298.48	856.30	190.60	488.10	222.15
64	E21a_E22a	KnownJunction	0	319.41	592.95	415.26	955.86	247.43	505.34	274.82
65	ER22a	ExonRegion	0	210.48	479.86	292.52	692.94	172.59	418.35	210.34
66	E22a_E23a	KnownJunction	0	205.05	451.26	280.12	583.00	140.76	348.32	182.34
67	ER23a	ExonRegion	0	157.00	456.27	217.15	626.35	158.46	360.74	176.58
68	E23a_E24a	KnownJunction	0	159.54	471.70	198.04	677.06	155.26	390.42	186.82
69	ER24a	ExonRegion	0	182.37	530.22	247.32	722.23	154.98	449.14	178.25
70	E24a_E25a	KnownJunction	0	215.40	681.01	368.90	922.64	179.74	655.12	220.96
71	ER25a	ExonRegion	0	215.89	603.28	352.71	831.90	167.45	597.73	218.66
72	E25_Da	NovelBoundary	0	57.00	114.39	67.71	157.05	20.54	100.10	37.35
73	E25a_E26a	KnownJunction	0	113.78	256.25	161.05	424.84	90.76	334.30	109.88
74	E25b_E26a	KnownJunction	0	101.86	252.26	130.11	333.52	65.93	238.76	80.71
75	ER25b	ExonRegion	0	107.41	259.30	136.83	327.95	61.28	250.65	82.97
76	ER26a	ExonRegion	0	141.32	437.20	198.72	612.80	109.16	475.07	132.54
77	E26a_E27a	KnownJunction	0	97.82	310.92	146.88	408.70	94.52	333.98	96.12
78	ER27a	ExonRegion	0	85.70	325.79	120.46	416.17	75.82	310.91	92.03
79	E27_Da	KnownBoundary	0	96.10	247.35	148.96	341.46	61.78	282.39	62.96
80	ER27b	ExonRegion	0	78.48	233.61	106.38	285.40	49.72	246.45	56.70
81	E27_Db	KnownBoundary	1	43.43	84.15	68.60	147.35	24.60	165.22	25.38
82	ER27c	ExonRegion	0	37.66	23.63	46.36	47.30	16.26	43.64	20.20
83	IG37	Intergenic	0	10.75	7.59	10.10	13.76	6.99	9.61	4.54
84	IG37_SR6	SilentIntergenicRegion	0	9.71	11.00	12.47	16.59	0.49	9.10	5.02
85	IG37_SR5	SilentIntergenicRegion	0	16.83	7.17	18.11	20.73	0.09	17.76	5.20
86	IG37_AR5	ActiveIntergenicRegion	0	13.12	9.73	13.94	19.04	0.67	14.16	6.35
87	IG37_SR3	SilentIntergenicRegion	0	2.57	6.76	3.77	11.44	0.05	9.91	2.22
88	IG37_AR3	ActiveIntergenicRegion	0	3.29	6.12	2.10	16.02	0.31	12.15	3.30
89	IG37_AR2	ActiveIntergenicRegion	0	11.76	4.67	7.08	10.62	19.12	7.53	5.08
90	IG37_AR1	ActiveIntergenicRegion	0	22.19	1.95	11.56	4.27	35.17	4.24	4.75