Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	RP11-706O15.1	Gene	0	44.71	90.03	41.31	59.34	50.29	28.52	50.63
2	381109	Transcript	0	29.93	54.62	24.51	40.89	19.52	16.42	28.77
3	381108	Transcript	0	83.00	103.19	64.95	69.56	88.51	34.91	89.84
4	ER1a	ExonRegion	0	1.48	17.96	2.67	11.60	3.11	6.09	3.17
5	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
6	E2a_E5a	KnownJunction	0	0.00	0.00	0.89	2.68	0.00	0.00	0.89
7	ER2a	ExonRegion	0	20.24	135.31	32.98	82.08	7.99	38.01	37.94
8	ER2b	ExonRegion	0	52.22	136.43	54.63	86.40	33.11	39.18	60.87
9	E2_Db	NovelBoundary	1	1.99	9.35	7.79	3.36	44.03	0.00	15.33
10	E2b_E3a	KnownJunction	0	32.75	62.76	23.14	48.41	12.40	13.11	26.56
11	E2b_E4a	NovelJunction	1	166.58	81.36	107.19	84.36	110.40	87.26	54.88
12	E2b_E5a	NovelJunction	0	5.69	20.78	8.65	26.06	5.33	7.80	19.69
13	E2b_E6a	NovelJunction	0	3.57	25.82	5.45	27.47	7.17	8.52	5.16
14	I2	Intron	1	7.83	11.84	8.43	6.60	9.48	2.63	19.94
15	I2_SR1	SilentIntronRegion	1	2.51	7.05	2.88	4.22	6.32	1.16	11.58
16	I2_AR1	ActiveIntronRegion	1	9.54	13.39	10.21	7.37	10.50	3.10	22.64
17	ER3a	ExonRegion	0	18.79	46.80	16.37	29.10	11.73	12.73	26.78
18	E3_Da	NovelBoundary	0	308.21	212.59	226.88	141.42	185.25	82.52	167.00
19	E3a_E4a	KnownJunction	1	31.81	13.98	13.95	25.76	1.11	10.02	19.00
20	I3	Intron	0	25.82	20.29	20.29	14.15	37.48	7.27	27.98
21	I3_SR2	SilentIntronRegion	1	17.95	20.04	14.62	12.72	34.01	5.80	26.51
22	I3_AR3	ActiveIntronRegion	1	38.70	15.35	30.91	14.17	31.07	6.13	37.84
23	I3_AR4	ActiveIntronRegion	0	51.77	23.99	42.42	24.78	59.93	13.03	46.38
24	I3_AR5	ActiveIntronRegion	0	83.83	45.53	63.07	35.43	68.55	21.28	65.36
25	I3_SR3	SilentIntronRegion	0	2.50	1.72	2.42	1.44	23.15	0.70	1.76
26	E4_Aa	NovelBoundary	0	2772.32	1776.68	1903.39	1596.23	1579.88	1565.11	1518.01
27	ER4a	ExonRegion	0	14.10	13.13	14.45	14.79	39.24	7.06	10.63
28	E4_Da	NovelBoundary	0	29.57	14.03	20.54	12.65	51.38	7.72	20.92
29	I4	Intron	1	16.91	17.11	12.84	9.27	64.23	4.00	35.41
30	I4_AR1	ActiveIntronRegion	0	1.18	0.00	0.52	0.00	26.79	0.00	0.00
31	I4_SR1	SilentIntronRegion	1	8.10	10.82	9.29	4.18	72.98	2.04	21.27
32	I4_AR2	ActiveIntronRegion	1	37.40	41.68	24.32	20.33	270.72	7.51	155.42
33	I4_AR3	ActiveIntronRegion	1	17.11	28.53	12.78	12.86	100.19	2.18	58.22
34	I4_AR4	ActiveIntronRegion	1	56.39	46.18	39.03	30.16	102.15	15.83	69.01
35	E5_Aa	NovelBoundary	1	3.17	11.98	5.48	2.82	1.82	2.95	14.47
36	ER5a	ExonRegion	0	61.85	95.66	51.49	56.11	43.31	25.46	71.54
37	E5_Da	NovelBoundary	1	35.87	7.54	32.46	0.00	1.94	1.05	6.19
38	E5a_E6a	KnownJunction	0	139.06	191.12	111.40	123.70	78.26	60.22	149.09
39	I5	Intron	0	1.77	2.12	1.39	0.00	32.45	0.00	2.36
40	I5_AR1	ActiveIntronRegion	0	1.79	2.13	1.40	0.00	32.79	0.00	2.39
41	E6_Aa	NovelBoundary	1	13.92	3.84	10.66	7.10	68.81	4.77	23.20
42	ER6a	ExonRegion	0	131.10	125.97	96.04	95.76	232.46	53.96	137.85