Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	SCML1	Gene	0	50.66	54.80	57.07	181.64	11.47	446.53	67.73
2	380045	Transcript	0	2.65	3.13	4.38	16.34	1.59	34.37	5.84
3	380041	Transcript	0	6.57	12.03	10.78	47.87	2.41	116.46	11.26
4	380043	Transcript	0	0	0	0	0	0	0	0
5	51659	Transcript	0	0	0	0	0	0	0	0
6	398080	Transcript	1	0.00	6.38	2.90	28.82	0.00	39.29	11.54
7	ER1a	ExonRegion	0	3.07	1.21	1.02	5.61	1.62	3.68	3.71
8	ER1b	ExonRegion	0	3.07	1.21	1.35	7.07	1.62	3.68	4.05
9	ER1c	ExonRegion	0	7.38	19.88	9.36	77.91	1.54	151.10	19.74
10	E1_Da	NovelBoundary	1	8.93	20.60	8.05	24.57	0.00	53.60	3.31
11	E1a_E2a	KnownJunction	0	1.03	9.20	0.52	29.37	0.00	92.19	4.89
12	E1a_E4a	KnownJunction	1	0.00	6.38	2.90	28.82	0.00	39.29	11.54
13	E1a_E4b	KnownJunction	0	4.12	8.17	12.13	38.42	3.16	87.18	12.45
14	E1a_E5a	NovelJunction	1	0.00	3.94	0.00	4.28	0.00	17.77	0.00
15	I1	Intron	1	17.36	16.45	17.19	30.93	1.01	46.60	10.26
16	I1_AR1	ActiveIntronRegion	1	11.21	16.91	9.24	31.27	0.34	48.23	6.15
17	I1_SR1	SilentIntronRegion	1	16.23	13.86	15.31	22.14	1.25	34.92	7.37
18	I1_AR2	ActiveIntronRegion	1	27.33	17.91	25.53	41.19	1.39	55.47	15.42
19	I1_SR2	SilentIntronRegion	1	20.15	17.18	28.51	28.55	1.22	45.26	12.84
20	I1_AR3	ActiveIntronRegion	1	24.35	17.49	23.64	40.80	1.71	55.45	18.18
21	I1_SR3	SilentIntronRegion	1	18.37	19.34	16.87	25.42	0.76	53.83	10.26
22	E2_Aa	NovelBoundary	0	19.48	17.08	28.48	42.05	0.00	77.75	17.05
23	ER2a	ExonRegion	0	15.70	18.12	23.03	52.96	2.42	170.38	17.13
24	E2_Da	NovelBoundary	1	17.22	8.59	33.41	21.75	1.06	59.58	12.58
25	E2a_E3a	KnownJunction	1	0.00	12.51	2.67	40.88	2.01	138.66	10.20
26	E2a_E4a	KnownJunction	1	0.00	0.00	6.18	0.00	0.00	20.77	0.00
27	E2a_E4b	NovelJunction	0	1.03	0.00	0.62	8.70	2.24	16.32	0.89
28	I2	Intron	1	38.29	19.27	42.46	36.90	1.83	71.38	17.55
29	I2_AR1	ActiveIntronRegion	1	36.16	15.85	38.12	30.35	1.30	55.43	15.38
30	I2_SR1	SilentIntronRegion	0	45.14	27.96	67.18	59.32	2.00	126.65	26.40
31	I2_AR2	ActiveIntronRegion	0	45.17	30.96	51.06	56.52	4.19	118.61	23.40
32	E3_Aa	NovelBoundary	0	76.76	22.80	67.15	61.47	2.35	134.67	34.05
33	ER3a	ExonRegion	0	18.00	20.93	25.11	68.30	4.17	146.01	21.10
34	E3_Da	NovelBoundary	1	69.40	32.13	69.67	64.34	4.40	152.71	25.09
35	E3a_E4a	NovelJunction	0	4.19	7.96	8.09	34.60	1.01	92.67	9.53
36	E3a_E4b	KnownJunction	1	1.70	2.65	4.57	34.43	1.06	64.72	2.48
37	I3	Intron	0	26.03	7.21	17.70	16.64	1.15	44.86	10.56
38	I3_AR1	ActiveIntronRegion	0	26.15	7.25	17.80	16.71	1.15	45.07	10.61
39	ER4a	ExonRegion	1	6.72	14.88	18.63	73.88	3.44	157.54	23.78
40	ER4b	ExonRegion	0	27.59	55.87	37.81	173.78	13.30	393.82	64.31
41	E4a_E5a	KnownJunction	0	48.03	74.64	45.99	232.17	23.61	475.40	95.07
42	ER5a	ExonRegion	0	113.44	101.26	101.35	325.50	23.54	826.01	139.11
43	E5a_E6a	KnownJunction	0	119.68	142.73	114.62	472.50	23.70	1326.78	138.05
44	ER6a	ExonRegion	0	75.92	110.61	74.16	344.07	18.42	872.75	110.93
45	E6_Da	NovelBoundary	1	7.48	18.57	16.47	47.54	0.97	64.64	2.18
46	E6a_E7a	KnownJunction	1	17.74	70.72	23.01	231.01	16.99	500.30	92.09
47	I6	Intron	0	13.52	7.58	18.84	17.60	0.42	24.22	2.62
48	I6_SR1	SilentIntronRegion	0	13.31	8.83	20.06	22.06	0.72	32.72	2.64
49	I6_AR1	ActiveIntronRegion	0	13.71	6.72	18.04	14.49	0.20	18.28	2.62
50	ER7a	ExonRegion	0	52.26	98.85	46.83	278.49	17.07	544.53	109.95
51	E7_Da	NovelBoundary	1	18.83	10.09	11.04	24.63	0.00	36.80	0.00
52	E7a_E8a	KnownJunction	0	61.45	57.46	34.70	229.06	19.34	395.97	68.49
53	I7	Intron	1	12.56	6.62	15.83	16.47	0.13	16.56	1.67
54	I7_SR1	SilentIntronRegion	0	13.81	6.67	15.47	18.19	0.12	16.19	1.72
55	I7_AR1	ActiveIntronRegion	1	8.84	6.47	17.04	11.32	0.17	17.79	1.56
56	E8_Aa	NovelBoundary	1	15.39	2.39	16.99	20.37	0.00	37.73	0.69
57	ER8a	ExonRegion	0	52.00	44.41	62.73	157.07	10.93	394.78	62.57
58	ER8b	ExonRegion	0	0.77	0.00	0.00	4.99	0.00	12.26	1.35