Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	PHKA2	Gene	0	32.62	19.95	43.57	35.32	84.61	13.34	63.50
2	379942	Transcript	0	34.03	18.62	45.51	35.18	86.63	11.76	65.17
3	ER1a	ExonRegion	0	6.01	9.15	8.85	14.44	14.52	4.64	17.04
4	E1a_E2a	KnownJunction	1	10.33	13.53	16.07	32.92	27.53	4.07	30.57
5	ER2a	ExonRegion	0	15.68	20.87	19.88	27.86	50.60	12.17	48.07
6	E2a_E3a	KnownJunction	1	16.46	14.53	15.42	39.15	53.09	9.11	48.87
7	ER3a	ExonRegion	1	14.78	18.17	16.51	27.04	52.83	11.88	56.61
8	E3a_E4a	KnownJunction	1	10.40	14.79	12.26	12.98	39.77	11.20	54.10
9	E3a_E5a	NovelJunction	0	11.47	14.82	10.17	16.55	1.96	3.06	9.37
10	ER4a	ExonRegion	0	15.31	13.92	21.19	20.00	55.76	5.80	55.93
11	E4a_E5a	KnownJunction	0	16.46	11.74	27.48	33.78	65.49	5.98	57.50
12	ER5a	ExonRegion	0	29.37	20.23	42.41	40.61	73.87	9.90	69.53
13	E5a_E6a	KnownJunction	0	30.11	21.33	41.31	42.02	68.90	14.36	68.86
14	ER6a	ExonRegion	0	29.52	20.91	44.36	39.93	81.82	8.58	60.24
15	E6a_E7a	KnownJunction	1	30.83	12.45	49.95	30.42	88.73	3.83	56.14
16	ER7a	ExonRegion	0	35.82	19.01	49.51	34.02	68.27	9.31	60.22
17	E7a_E8a	KnownJunction	0	28.36	19.28	34.13	33.86	68.24	10.67	41.33
18	ER8a	ExonRegion	0	53.75	28.07	59.08	41.63	96.46	16.18	58.97
19	E8a_E9a	KnownJunction	0	38.37	31.26	68.52	49.47	66.65	18.20	53.87
20	ER9a	ExonRegion	0	48.21	32.49	65.03	50.39	56.34	14.71	53.54
21	E9a_E10a	KnownJunction	0	51.87	26.17	56.52	44.86	59.20	11.90	47.65
22	ER10a	ExonRegion	0	42.91	20.44	55.84	33.37	86.79	9.58	51.81
23	E10a_E11a	KnownJunction	1	24.55	10.82	42.21	26.44	73.35	1.66	51.81
24	ER11a	ExonRegion	0	28.69	21.18	39.86	38.42	78.67	9.65	59.21
25	E11a_E12a	KnownJunction	1	24.68	19.10	38.91	27.50	85.41	3.86	47.05
26	ER12a	ExonRegion	0	30.82	15.51	46.56	44.65	94.26	10.48	70.80
27	E12a_E13a	KnownJunction	1	31.91	9.56	47.85	49.63	100.07	6.43	73.82
28	ER13a	ExonRegion	0	36.31	18.30	49.67	52.58	111.11	12.10	77.91
29	E13a_E14a	KnownJunction	1	39.66	15.95	66.99	65.67	134.88	14.98	93.63
30	ER14a	ExonRegion	0	62.24	21.19	67.42	59.09	127.50	16.17	86.08
31	E14a_E15a	KnownJunction	0	36.42	24.46	45.18	50.47	126.05	16.35	58.16
32	ER15a	ExonRegion	0	80.02	24.03	79.86	55.82	152.42	13.93	105.85
33	E15a_E16a	KnownJunction	0	76.72	23.38	62.42	49.85	140.39	8.66	75.90
34	ER16a	ExonRegion	0	55.50	10.55	56.19	37.33	117.43	11.52	89.43
35	E16_Da	NovelBoundary	0	7.71	5.73	13.09	6.07	10.86	1.26	6.78
36	E16a_E17a	KnownJunction	0	63.72	6.52	53.18	23.41	138.34	8.47	77.30
37	I16	Intron	1	5.83	1.11	15.37	1.93	4.35	1.89	7.03
38	I16_AR1	ActiveIntronRegion	1	5.87	1.12	15.49	1.94	4.38	1.91	7.08
39	E17_Aa	NovelBoundary	0	9.16	0.00	18.28	1.44	4.75	1.13	8.96
40	ER17a	ExonRegion	0	59.34	16.35	66.44	22.78	128.50	10.41	81.57
41	E17a_E18a	KnownJunction	0	66.08	14.61	78.84	32.92	163.38	8.25	80.79
42	ER18a	ExonRegion	0	56.12	23.79	81.00	29.67	140.31	15.59	93.01
43	E18a_E19a	KnownJunction	0	60.37	22.88	90.00	38.28	142.07	18.68	90.35
44	ER19a	ExonRegion	0	43.89	27.15	58.10	36.91	125.49	12.89	85.56
45	E19a_E20a	KnownJunction	0	44.61	21.83	89.77	38.06	189.22	10.56	120.44
46	ER20a	ExonRegion	0	57.80	27.61	85.76	42.72	156.23	8.46	102.42
47	E20a_E21a	KnownJunction	1	59.15	19.99	70.86	40.45	130.53	3.83	85.74
48	ER21a	ExonRegion	0	57.23	22.50	84.22	35.94	146.44	9.43	88.28
49	E21a_E22a	KnownJunction	0	55.64	22.88	63.00	37.47	112.98	10.02	77.82
50	ER22a	ExonRegion	0	41.17	21.24	52.13	38.23	87.63	13.83	69.45
51	E22a_E23a	KnownJunction	0	22.00	12.66	25.97	32.83	50.99	20.37	58.97
52	ER23a	ExonRegion	0	22.58	14.32	28.99	31.33	66.03	10.91	60.12
53	E23a_E24a	KnownJunction	1	24.90	13.61	31.82	28.55	65.68	4.18	46.95
54	ER24a	ExonRegion	0	24.03	13.10	35.61	31.62	88.56	8.12	64.51
55	E24a_E25a	KnownJunction	1	14.24	15.55	35.16	28.23	95.46	13.94	66.44
56	ER25a	ExonRegion	0	24.87	17.34	44.78	28.44	62.20	11.91	61.81
57	E25a_E26a	KnownJunction	0	26.52	15.82	50.87	34.11	71.74	20.53	76.77
58	ER26a	ExonRegion	0	31.11	17.66	53.97	29.49	87.81	14.42	75.42
59	E26a_E27a	KnownJunction	0	34.00	14.71	62.35	32.59	128.29	14.55	68.17
60	ER27a	ExonRegion	0	24.89	18.05	43.81	35.16	65.46	13.43	67.61
61	E27a_E28a	KnownJunction	1	22.85	12.69	20.36	19.34	26.14	10.69	65.88
62	E27a_E30a	NovelJunction	0	1.92	1.00	1.06	3.55	56.78	0.00	2.09
63	E28a_E29a	KnownJunction	0	24.40	12.24	27.06	28.04	17.84	4.58	32.27
64	ER28a	ExonRegion	0	31.53	17.21	31.95	31.17	22.03	10.22	54.87
65	I28	Intron	1	2.97	1.47	1.78	3.09	8.40	0.51	15.66
66	I28_AR1	ActiveIntronRegion	1	2.97	1.47	1.78	3.09	8.41	0.51	15.68
67	ER29a	ExonRegion	1	25.26	9.74	24.45	26.19	20.98	3.79	37.74
68	E29_Da	NovelBoundary	1	12.18	12.14	27.22	28.47	12.59	10.16	43.62
69	E29a_E30a	KnownJunction	1	12.15	1.10	9.73	14.41	19.06	2.73	26.23
70	I29	Intron	0	14.65	13.53	24.19	24.53	7.33	9.68	26.49
71	I29_AR1	ActiveIntronRegion	1	14.67	13.54	24.21	24.55	7.34	9.69	26.52
72	E30_Aa	NovelBoundary	0	8.01	12.08	14.61	19.51	6.13	10.80	20.19
73	ER30a	ExonRegion	0	16.25	20.08	18.27	28.26	47.94	14.02	41.39
74	E30a_E31a	KnownJunction	1	17.02	25.14	35.21	33.24	70.73	19.94	76.95
75	ER31a	ExonRegion	1	17.49	25.98	31.99	29.79	87.81	27.65	74.64
76	E31a_E32a	KnownJunction	0	15.40	24.33	27.16	24.44	68.49	30.55	54.72
77	ER32a	ExonRegion	0	19.14	27.74	29.37	37.32	84.82	20.11	63.41
78	E32a_E33a	KnownJunction	0	22.63	31.63	36.97	41.48	131.91	20.50	77.02
79	ER33a	ExonRegion	0	21.44	20.09	31.74	37.71	73.43	18.65	51.01
80	IG50_AR14	ActiveIntergenicRegion	0	5.54	5.23	7.57	8.16	11.35	2.23	16.22
81	IG50_SR6	SilentIntergenicRegion	0	2.81	2.14	4.87	4.47	1.96	1.98	10.21
82	IG50_SR5	SilentIntergenicRegion	0	1.52	1.43	2.49	1.26	1.78	2.86	7.82
83	IG50_AR10	ActiveIntergenicRegion	0	1.54	1.75	5.04	8.73	3.24	1.23	2.70
84	IG50_AR9	ActiveIntergenicRegion	0	1.54	1.21	5.05	9.18	3.17	1.23	3.62