Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	SPTAN1	Gene	0	198.90	462.93	249.36	467.90	369.67	213.29	410.41
2	372721	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
3	358161	Transcript	0	0.00	0.00	0.19	0.37	0.04	0.00	0.02
4	372731	Transcript	0	0	0	0	0	0	0	0
5	372719	Transcript	1	9.38	186.34	57.08	266.82	242.26	92.70	41.13
6	372739	Transcript	0	17.32	41.14	16.60	33.06	169.21	28.94	17.99
7	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	1.53	0.00
8	ER1b	ExonRegion	0	55.60	85.46	51.79	61.36	50.95	31.91	44.61
9	E1a_E2a	KnownJunction	0	13.59	46.63	8.39	30.50	9.84	33.39	14.47
10	ER2a	ExonRegion	0	104.61	332.47	141.91	259.81	116.60	168.80	148.88
11	E2a_E3a	KnownJunction	0	104.46	500.37	179.82	412.30	140.60	228.98	202.45
12	ER3a	ExonRegion	0	157.23	550.93	217.40	448.47	181.19	227.88	266.35
13	E3a_E4a	KnownJunction	0	146.64	528.63	210.74	407.18	151.48	219.22	275.23
14	ER4a	ExonRegion	0	183.38	452.08	240.25	393.44	235.87	184.58	284.97
15	E4a_E5a	KnownJunction	0	225.10	383.17	274.89	392.47	279.19	175.06	294.94
16	ER5a	ExonRegion	0	216.42	411.11	269.88	402.65	241.40	166.51	280.12
17	E5a_E6a	KnownJunction	0	217.95	404.13	265.87	411.03	258.33	175.73	268.17
18	ER6a	ExonRegion	0	167.55	365.89	210.51	342.24	214.70	137.75	251.18
19	E6a_E7a	KnownJunction	0	178.47	397.15	238.91	383.99	258.17	149.22	267.11
20	ER7a	ExonRegion	0	170.96	434.12	227.62	411.46	274.74	162.87	334.66
21	E7a_E8a	KnownJunction	0	131.55	472.52	198.24	398.65	253.00	184.41	363.19
22	ER8a	ExonRegion	0	175.45	499.42	224.16	433.03	264.16	176.08	399.44
23	E8a_E9a	KnownJunction	0	140.90	460.49	193.77	490.13	299.66	150.67	367.21
24	ER9a	ExonRegion	0	138.89	467.43	184.51	441.15	243.95	150.52	352.69
25	E9a_E10a	KnownJunction	0	118.05	404.92	166.06	418.86	223.06	147.24	317.86
26	ER10a	ExonRegion	0	119.64	413.41	167.84	399.16	257.64	113.96	326.42
27	E10a_E11a	KnownJunction	0	111.82	380.83	156.84	382.09	252.38	118.03	290.23
28	ER11a	ExonRegion	0	119.69	386.09	168.08	347.97	232.96	102.74	303.30
29	E11a_E12a	KnownJunction	0	117.38	343.97	181.21	341.32	226.52	104.92	306.79
30	ER12a	ExonRegion	0	138.87	405.11	210.10	362.36	213.04	122.77	344.61
31	E12a_E13a	KnownJunction	0	171.22	370.87	246.45	334.47	296.30	123.84	376.95
32	ER13a	ExonRegion	0	151.50	373.72	203.87	360.20	248.24	130.02	329.82
33	E13a_E14a	KnownJunction	0	125.42	359.73	148.73	344.27	185.92	124.16	291.29
34	ER14a	ExonRegion	0	219.88	378.34	246.61	361.68	273.17	124.00	344.41
35	E14a_E15a	KnownJunction	0	213.00	437.89	276.27	407.23	343.93	150.45	406.34
36	ER15a	ExonRegion	0	271.58	448.98	321.18	414.62	386.24	135.45	417.84
37	E15a_E16a	KnownJunction	0	302.34	417.56	375.63	397.83	420.69	124.46	459.85
38	ER16a	ExonRegion	0	242.81	463.97	296.84	429.71	392.77	147.71	436.74
39	E16a_E17a	KnownJunction	0	149.24	403.24	189.75	390.87	277.42	115.00	338.08
40	ER17a	ExonRegion	0	173.83	357.20	191.04	368.29	249.51	137.41	302.00
41	E17a_E18a	KnownJunction	0	172.96	384.64	179.31	371.61	250.26	167.12	303.05
42	ER18a	ExonRegion	0	176.15	402.37	226.11	376.67	301.82	166.67	371.44
43	E18a_E19a	KnownJunction	0	130.38	366.67	188.28	350.67	304.92	166.43	341.37
44	ER19a	ExonRegion	0	162.47	415.30	210.13	406.56	291.88	150.27	390.48
45	E19a_E20a	KnownJunction	0	170.92	398.17	217.41	412.84	321.89	137.59	422.25
46	ER20a	ExonRegion	0	155.69	430.97	220.74	431.25	326.00	132.04	401.44
47	E20a_E21a	KnownJunction	0	152.30	408.10	206.77	398.67	262.87	130.73	328.23
48	ER21a	ExonRegion	0	135.16	358.59	199.61	348.89	252.55	110.90	342.05
49	E21a_E22a	KnownJunction	0	122.04	355.87	214.97	369.41	308.29	111.70	376.57
50	ER22a	ExonRegion	0	134.11	331.66	209.68	334.13	302.72	105.24	336.98
51	E22a_E23a	KnownJunction	1	98.89	165.22	138.82	118.96	62.80	19.97	269.57
52	E22a_E24a	KnownJunction	1	9.38	186.34	57.08	266.82	242.26	92.70	41.13
53	I22	Intron	1	41.33	28.74	17.08	14.85	19.26	11.53	7.92
54	I22_AR1	ActiveIntronRegion	1	60.29	37.76	16.34	20.08	26.89	14.05	8.47
55	ER23a	ExonRegion	1	113.33	156.90	153.77	104.04	82.05	23.25	306.76
56	E23a_E24a	KnownJunction	1	128.40	164.72	155.98	99.83	81.51	26.16	306.51
57	I23	Intron	1	50.79	35.58	22.06	18.50	18.42	10.27	15.24
58	I23_AR1	ActiveIntronRegion	1	50.87	35.63	22.09	18.53	18.45	10.29	15.27
59	ER24a	ExonRegion	0	208.89	455.28	285.57	451.90	435.45	128.64	444.27
60	E24a_E25a	KnownJunction	0	261.66	479.87	334.86	493.03	405.94	153.62	487.01
61	ER25a	ExonRegion	0	195.56	493.80	291.52	494.18	436.32	166.67	497.81
62	E25a_E26a	KnownJunction	0	127.09	356.92	165.10	327.59	414.58	121.64	380.37
63	E26a_E27a	KnownJunction	0	119.93	204.68	177.80	225.51	478.76	70.35	253.08
64	ER26a	ExonRegion	0	206.04	429.20	285.88	443.09	542.43	148.75	518.09
65	ER27a	ExonRegion	0	243.68	394.19	332.39	452.61	559.20	142.18	499.84
66	E27a_E28a	KnownJunction	0	211.36	310.03	245.45	332.30	521.85	114.70	366.58
67	ER28a	ExonRegion	0	207.61	400.02	300.33	414.77	465.68	143.98	409.94
68	E28a_E29a	KnownJunction	0	142.06	338.06	225.56	334.33	386.69	122.90	295.17
69	ER29a	ExonRegion	0	167.74	430.60	219.52	383.63	286.63	137.96	346.97
70	E29a_E30a	KnownJunction	0	209.17	451.84	250.75	396.10	334.73	167.28	438.15
71	ER30a	ExonRegion	0	213.21	477.48	285.41	450.21	419.42	167.34	452.39
72	E30a_E31a	KnownJunction	0	174.59	443.67	219.54	409.94	399.11	123.57	393.35
73	ER31a	ExonRegion	0	225.26	437.48	252.80	458.33	443.92	160.01	438.32
74	E31a_E32a	KnownJunction	0	249.90	384.22	246.19	385.64	420.51	149.30	382.68
75	E32_Aa	NovelBoundary	1	64.56	33.47	8.03	21.94	6.20	19.38	22.94
76	ER32a	ExonRegion	0	346.27	487.34	315.65	543.97	610.09	203.16	526.13
77	E32a_E33a	KnownJunction	0	415.25	499.71	348.52	625.34	757.49	205.66	610.91
78	ER33a	ExonRegion	0	431.74	541.62	364.11	586.34	632.04	225.21	558.32
79	E33_Da	NovelBoundary	1	54.06	46.03	15.52	22.21	7.15	10.24	46.81
80	E33a_E34a	KnownJunction	0	264.03	385.95	272.06	422.00	581.90	169.91	423.34
81	ER34a	ExonRegion	0	243.82	424.85	291.07	450.83	444.89	165.17	410.94
82	E34a_E35a	KnownJunction	0	289.74	435.13	349.73	466.13	521.09	213.00	454.56
83	ER35a	ExonRegion	0	220.34	446.80	295.17	507.07	408.25	205.60	447.35
84	E35_Da	NovelBoundary	1	86.49	1.44	93.23	1.33	0.00	1.07	5.50
85	E35a_E36a	KnownJunction	0	239.47	480.03	301.66	535.81	401.44	212.98	428.84
86	ER36a	ExonRegion	0	308.58	540.69	369.37	570.88	536.11	224.14	538.53
87	E36a_E38a	KnownJunction	0	19.58	39.35	12.76	42.99	216.58	34.57	17.14
88	E36a_E39a	KnownJunction	0	249.28	455.34	278.51	467.57	197.63	144.88	414.61
89	E36b_E37a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
90	ER36b	ExonRegion	0	0.00	0.00	0.68	1.50	0.16	0.00	0.00
91	E37a_E39a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
92	ER37a	ExonRegion	0	0.00	0.00	0.07	0.00	0.00	0.00	0.07
93	E38a_E39a	KnownJunction	0	13.12	39.83	15.78	21.75	169.85	24.04	16.65
94	ER38a	ExonRegion	0	26.08	61.47	22.71	50.46	270.44	50.59	27.84
95	ER39a	ExonRegion	0	277.02	525.48	340.49	557.49	572.60	242.56	537.08
96	E39a_E40a	KnownJunction	0	304.52	552.51	312.63	491.19	544.55	214.42	486.84
97	ER40a	ExonRegion	0	317.70	668.92	372.25	622.89	548.59	310.27	582.75
98	E40a_E41a	KnownJunction	0	214.72	582.28	305.33	588.31	463.29	300.45	564.06
99	ER41a	ExonRegion	0	293.69	570.93	324.16	556.10	484.99	277.95	478.02
100	E41a_E42a	KnownJunction	0	230.50	515.81	273.75	541.93	395.40	253.10	440.06
101	ER42a	ExonRegion	0	154.33	481.78	209.96	479.46	330.58	220.67	404.68
102	E42a_E43a	KnownJunction	0	159.66	397.72	193.86	383.20	323.85	200.49	383.37
103	ER43a	ExonRegion	0	158.78	430.24	223.29	440.21	326.66	203.83	398.22
104	E43a_E44a	KnownJunction	0	178.60	451.84	223.24	450.23	386.14	226.24	422.26
105	E44_Aa	NovelBoundary	1	68.91	7.20	76.95	4.17	0.00	4.15	2.91
106	ER44a	ExonRegion	0	144.40	467.34	203.13	492.38	333.69	218.71	365.69
107	E44a_E45a	KnownJunction	0	189.55	447.90	279.29	496.88	344.36	213.43	395.32
108	ER45a	ExonRegion	0	252.87	590.98	365.00	617.04	472.35	276.33	552.90
109	E45a_E46a	KnownJunction	0	238.88	564.49	328.94	569.29	481.55	278.91	496.11
110	E46_Aa	NovelBoundary	1	108.82	14.00	133.18	23.24	0.00	7.85	2.26
111	ER46a	ExonRegion	0	280.63	680.28	456.86	626.03	627.95	315.07	677.99
112	E46a_E47a	KnownJunction	0	265.99	670.16	449.58	617.38	586.99	375.79	703.92
113	ER47a	ExonRegion	0	250.92	606.46	378.28	610.18	610.61	330.41	654.57
114	E47_Da	NovelBoundary	1	72.45	41.01	132.21	25.52	4.29	15.70	18.95
115	E47a_E48a	KnownJunction	0	208.82	627.02	400.54	607.57	626.97	352.66	669.88
116	E47a_E49a	NovelJunction	0	1.03	2.21	0.00	7.21	0.00	8.60	0.00
117	ER48a	ExonRegion	0	277.69	568.38	397.72	625.12	516.31	318.65	679.38
118	E48a_E49a	KnownJunction	0	246.18	551.10	301.52	654.33	421.80	282.87	604.70
119	ER49a	ExonRegion	0	270.18	530.67	313.25	554.25	510.30	259.14	528.04
120	E49a_E50a	KnownJunction	0	316.62	387.53	299.72	402.19	440.19	192.69	456.89
121	ER50a	ExonRegion	0	197.59	414.65	219.76	399.94	342.23	230.12	380.91
122	E50a_E51a	KnownJunction	0	145.69	425.89	189.47	456.86	283.18	253.26	353.96
123	ER51a	ExonRegion	0	129.25	431.37	166.70	466.54	329.01	249.11	430.45
124	E51a_E52a	KnownJunction	0	99.92	227.20	126.72	289.44	199.59	122.93	221.95
125	E51a_E54a	NovelJunction	1	6.16	64.42	5.69	14.76	2.21	34.84	43.08
126	E51b_E53a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
127	E51c_E54a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
128	ER51b	ExonRegion	0	3.17	6.68	0.00	1.25	0.00	1.69	4.72
129	ER51c	ExonRegion	0	1.31	1.94	0.00	0.87	0.00	0.49	0.81
130	E52a_E54a	KnownJunction	0	53.56	219.79	100.39	329.29	198.83	168.38	171.55
131	ER52a	ExonRegion	0	109.16	341.04	175.71	479.25	254.70	226.95	307.91
132	ER53a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
133	E54_Ab	NovelBoundary	0	41.12	97.36	48.16	112.67	124.35	65.66	65.51
134	ER54a	ExonRegion	0	98.82	380.98	180.86	539.06	268.87	260.40	321.17
135	ER54b	ExonRegion	0	109.56	448.80	191.68	566.23	357.95	281.63	352.85
136	E54_Da	NovelBoundary	0	31.64	134.14	45.54	139.55	158.47	72.36	75.33
137	E54b_E55a	KnownJunction	0	126.64	517.26	204.42	541.52	401.00	275.39	385.41
138	ER54c	ExonRegion	0	127.41	492.14	207.01	577.84	389.46	287.37	393.89
139	ER55a	ExonRegion	0	147.26	527.27	186.18	554.85	391.45	293.39	388.97
140	E55a_E56a	KnownJunction	0	168.12	573.77	240.13	625.59	457.92	318.30	468.55
141	E56_Aa	NovelBoundary	1	88.42	11.19	105.85	6.47	3.20	4.05	12.43
142	ER56a	ExonRegion	0	194.26	597.19	270.78	673.89	515.46	381.06	552.30
143	E56a_E57a	KnownJunction	0	174.64	524.88	258.18	690.74	511.27	396.61	525.75
144	ER57a	ExonRegion	0	214.85	700.49	296.71	830.26	633.44	492.46	631.01
145	E57a_E58a	KnownJunction	0	225.50	773.01	277.42	889.62	671.81	567.99	680.47
146	ER58a	ExonRegion	0	238.11	718.10	299.81	835.25	599.57	530.70	641.93
147	E58a_E59a	KnownJunction	0	222.34	690.41	231.64	787.00	545.61	561.46	582.94
148	ER59a	ExonRegion	0	167.38	552.07	198.35	656.18	399.82	452.75	436.17
149	ER59b	ExonRegion	0	10.50	23.89	15.13	17.04	19.98	6.54	10.34