Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 CRB2 Gene 0 0.64 0.83 14.67 9.91 25.12 1.50 0.46 2 373631 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3 359999 Transcript 0 0.54 0.00 6.94 1.55 2.28 1.56 0.00 4 373629 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 ER1b ExonRegion 0 0.00 0.00 0.99 2.18 0.95 0.00 0.00 7 E1a_E2a KnownJunction 0 0.00 0.00 4.15 1.38 2.01 0.00 0.00 8 ER2a ExonRegion 0 0.18 0.85 8.20 7.74 11.02 1.73 0.32 9 E2a_E3a KnownJunction 0 0.00 0.00 2.31 11.13 16.64 0.00 0.00 10 ER3a ExonRegion 0 0.00 0.00 4.51 5.21 18.13 0.00 0.00 11 E3a_E4a KnownJunction 0 0.00 0.00 6.31 2.95 11.27 0.00 0.00 12 ER4a ExonRegion 0 0.00 0.00 4.88 3.73 22.29 0.42 0.02 13 E4a_E5a KnownJunction 0 0.00 0.00 4.66 3.09 19.41 1.58 0.00 14 ER5a ExonRegion 0 0.21 0.00 8.15 4.55 26.99 1.19 0.26 15 E5a_E6a KnownJunction 0 0.00 0.00 7.23 7.42 32.41 0.00 0.00 16 ER6a ExonRegion 0 0.34 0.00 8.07 7.26 28.30 0.00 0.00 17 E6a_E8a KnownJunction 0 0.00 0.00 14.31 5.88 25.31 0.00 0.00 18 ER7a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19 E7a_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20 ER8a ExonRegion 0 0.66 1.16 22.59 14.44 38.88 1.82 0.70 21 E8a_E9a KnownJunction 0 0.00 0.00 17.78 11.22 36.01 0.00 0.00 22 ER9a ExonRegion 0 0.46 1.62 16.18 12.92 30.67 1.81 0.10 23 E9a_E10a KnownJunction 0 0.00 1.10 18.77 16.47 38.71 0.00 0.00 24 ER10a ExonRegion 0 0.35 0.56 14.22 12.47 31.42 0.00 0.00 25 E10a_E11a KnownJunction 0 0.00 0.00 5.59 8.83 18.28 0.00 0.00 26 ER11a ExonRegion 0 0.15 0.23 4.18 7.65 6.71 1.29 0.20 27 E11_Da KnownBoundary 0 0.00 0.00 2.20 1.11 0.00 0.00 0.00 28 E11a_E12a KnownJunction 0 0.00 0.00 8.87 6.50 15.75 0.00 0.00 29 ER11b ExonRegion 0 0.54 0.00 6.94 1.55 2.28 1.56 0.00 30 E11_Db NovelBoundary 0 0.00 1.37 19.40 1.65 0.00 2.95 0.80 31 I11 Intron 0 0.93 1.15 10.72 2.18 1.71 0.58 0.21 32 I11_SR1 SilentIntronRegion 0 0.93 1.15 10.77 2.19 1.72 0.58 0.21 33 ER12a ExonRegion 0 0.00 0.79 11.03 4.39 22.54 0.76 0.44 34 E12_Da NovelBoundary 0 0.93 0.00 12.53 4.47 2.95 0.00 0.00 35 E12a_E13a KnownJunction 0 0.00 0.00 10.71 1.19 27.78 0.00 0.00 36 ER13a ExonRegion 0 0.00 0.00 13.81 5.68 20.69 0.76 0.80 37 E13a_E14a KnownJunction 0 0.00 0.00 8.29 4.01 12.15 0.00 0.00 38 ER14a ExonRegion 0 1.33 1.25 21.66 12.17 33.01 2.09 0.82 39 IG38 Intergenic 0 0.99 0.62 11.07 8.61 20.45 2.67 0.60 40 IG38_AR2 ActiveIntergenicRegion 0 1.09 0.71 12.51 9.81 23.30 3.04 0.68