Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	CDK5RAP2	Gene	0	84.81	36.85	54.31	35.96	119.10	32.31	59.23
2	345313	Transcript	0	2.44	0.27	3.40	0.69	1.54	0.62	0.64
3	373938	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
4	360822	Transcript	0	0	0	0	0	0	0	0
5	359309	Transcript	0	1.85	0.00	0.66	1.41	2.26	0.00	1.58
6	349780	Transcript	0	0	0	0	0	0	0	0
7	360190	Transcript	1	53.11	13.21	45.80	29.77	19.32	13.99	19.26
8	ER1a	ExonRegion	0	6.64	10.11	4.91	7.73	10.72	8.73	9.59
9	E1a_E2a	KnownJunction	0	32.78	17.34	29.42	20.24	31.44	22.19	23.59
10	ER2a	ExonRegion	0	29.05	26.28	30.21	30.90	25.40	20.25	30.28
11	E2a_E3a	KnownJunction	0	19.18	39.93	19.80	39.61	11.62	19.11	34.22
12	ER3a	ExonRegion	0	18.70	36.25	23.30	27.16	23.16	33.91	30.39
13	E3a_E4a	KnownJunction	1	18.11	37.78	27.09	15.66	24.44	32.96	33.29
14	ER4a	ExonRegion	0	41.90	47.53	44.28	29.14	56.87	30.67	43.59
15	E4a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
16	ER5a	ExonRegion	0	35.16	26.52	32.87	16.78	45.74	23.31	32.36
17	E5a_E6a	KnownJunction	0	31.16	27.85	33.86	18.23	55.63	25.00	35.04
18	ER6a	ExonRegion	0	40.29	42.83	36.68	25.60	58.27	24.67	37.63
19	E6a_E8a	KnownJunction	0	59.00	27.59	37.58	23.41	81.75	29.27	35.40
20	E6b_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
21	ER6b	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.92	0.00
22	E7a_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
23	ER7a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
24	ER8a	ExonRegion	0	54.93	36.88	42.05	31.09	73.52	23.87	42.01
25	E8a_E9a	KnownJunction	0	62.79	51.05	54.25	23.76	64.92	21.57	50.10
26	ER9a	ExonRegion	0	74.29	52.42	47.62	41.70	80.12	31.03	53.92
27	E9a_E10a	KnownJunction	0	65.22	51.57	50.25	34.22	61.27	22.06	42.39
28	ER10a	ExonRegion	0	69.27	50.46	57.89	38.73	65.51	25.66	43.15
29	E10a_E11a	KnownJunction	0	53.36	38.49	52.61	36.90	47.37	29.37	39.70
30	ER11a	ExonRegion	0	71.29	38.83	68.25	34.84	89.70	27.02	48.51
31	E11a_E12a	KnownJunction	0	77.79	37.04	72.57	40.88	99.98	29.85	44.38
32	ER12a	ExonRegion	0	62.43	39.84	64.72	31.50	78.48	23.18	46.44
33	E12a_E13a	KnownJunction	1	59.90	53.36	65.43	35.71	49.10	17.42	40.41
34	ER13a	ExonRegion	0	64.09	35.33	53.48	34.13	91.34	23.68	54.10
35	E13a_E14a	KnownJunction	0	93.40	36.18	57.35	28.80	99.22	18.36	55.29
36	ER14a	ExonRegion	0	143.15	37.77	76.86	41.84	164.66	29.00	71.17
37	E14a_E15a	KnownJunction	1	215.27	44.58	93.13	43.81	199.96	31.01	69.11
38	ER15a	ExonRegion	0	204.90	43.03	102.60	47.57	222.64	28.15	79.46
39	E15a_E16a	KnownJunction	0	178.53	35.55	98.84	43.18	205.31	24.84	69.44
40	ER16a	ExonRegion	0	166.57	30.40	101.16	36.88	179.81	32.33	73.54
41	E16a_E17a	KnownJunction	0	131.10	22.33	72.15	26.82	135.50	18.41	53.37
42	ER17a	ExonRegion	0	105.90	29.02	74.05	22.18	142.69	32.37	56.79
43	E17a_E18a	KnownJunction	0	84.37	29.00	55.87	14.79	99.75	17.31	40.94
44	E17a_E18b	KnownJunction	1	12.38	1.63	16.78	1.63	7.28	2.81	2.94
45	ER18a	ExonRegion	0	93.75	31.28	74.51	14.96	111.76	19.31	48.40
46	ER18b	ExonRegion	0	108.07	35.20	80.14	22.13	138.27	27.53	68.20
47	E18a_E19a	KnownJunction	0	115.84	40.72	78.05	30.94	123.45	31.73	57.50
48	ER19a	ExonRegion	0	130.78	38.84	81.30	31.02	159.04	33.33	73.34
49	E19a_E20a	KnownJunction	0	133.75	26.90	69.74	25.41	188.36	26.18	75.78
50	E19a_E21a	KnownJunction	0	8.11	6.65	10.62	12.25	5.99	6.49	5.12
51	E19a_E23a	KnownJunction	0	2.27	0.00	3.61	2.52	1.96	0.00	0.89
52	ER20a	ExonRegion	0	142.72	27.97	67.04	24.45	170.41	26.35	75.81
53	E20a_E21a	KnownJunction	0	105.03	30.26	50.73	22.57	140.41	13.08	69.06
54	ER21a	ExonRegion	0	141.33	38.76	74.28	30.84	174.01	21.81	74.74
55	E21a_E22a	KnownJunction	1	149.19	37.33	74.97	36.90	162.27	13.37	66.43
56	ER22a	ExonRegion	0	131.17	44.11	70.20	35.70	154.49	20.00	69.53
57	E22_Da	KnownBoundary	0	109.90	52.12	66.42	31.21	141.54	29.69	81.43
58	E22a_E37b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
59	ER22b	ExonRegion	0	56.89	33.96	40.69	36.77	94.17	21.25	52.44
60	E22b_E23a	KnownJunction	1	40.59	15.76	33.67	50.01	63.93	11.52	47.58
61	ER23a	ExonRegion	0	79.30	25.67	52.38	41.84	109.56	21.09	52.32
62	E23a_E24a	KnownJunction	0	139.39	55.72	77.31	46.03	156.94	30.71	69.25
63	E23a_E25a	KnownJunction	0	1.85	0.00	0.66	1.41	2.26	0.00	1.58
64	ER24a	ExonRegion	0	109.37	52.83	68.33	41.50	132.33	32.49	69.49
65	E24_Da	NovelBoundary	1	23.42	5.86	5.85	8.32	3.25	4.88	3.12
66	E24a_E25a	KnownJunction	0	126.24	49.02	75.10	40.15	187.51	38.65	80.64
67	ER25a	ExonRegion	0	118.45	41.68	62.81	41.34	168.05	37.17	76.17
68	E25a_E26a	KnownJunction	0	72.37	54.75	45.12	39.04	156.34	25.33	65.06
69	ER26a	ExonRegion	0	80.29	44.98	56.68	46.70	159.26	35.53	80.99
70	E26a_E27a	KnownJunction	0	78.13	30.55	57.71	32.46	155.45	39.85	73.13
71	ER27a	ExonRegion	0	88.87	38.35	67.34	42.98	176.85	41.73	97.11
72	E27a_E28a	KnownJunction	0	76.79	33.84	65.60	42.91	180.30	37.73	92.12
73	ER28a	ExonRegion	0	92.55	36.82	72.27	48.03	155.52	45.23	83.10
74	E28a_E29a	KnownJunction	0	99.29	43.30	68.43	36.95	157.22	44.46	81.03
75	ER29a	ExonRegion	0	119.38	34.90	88.95	36.82	166.53	39.57	79.96
76	E29a_E30a	KnownJunction	0	145.22	32.81	104.77	44.19	173.63	34.06	80.34
77	ER30a	ExonRegion	0	119.84	34.88	83.69	48.68	147.01	39.55	81.52
78	E30a_E31a	KnownJunction	0	110.12	36.02	71.79	42.53	114.60	39.07	61.09
79	ER31a	ExonRegion	0	86.58	34.15	55.40	52.64	127.25	29.44	62.31
80	E31a_E32a	KnownJunction	0	55.06	39.62	39.79	48.85	96.45	29.53	62.17
81	ER32a	ExonRegion	0	69.74	45.57	49.15	56.94	117.95	34.61	73.76
82	E32a_E33a	KnownJunction	1	42.04	30.95	19.63	31.29	107.15	22.06	61.55
83	E32a_E34a	KnownJunction	1	53.11	13.21	45.80	29.77	19.32	13.99	19.26
84	ER33a	ExonRegion	0	45.88	41.99	29.29	34.63	122.85	32.90	63.02
85	E33a_E34a	KnownJunction	0	53.52	37.65	34.68	38.60	113.03	56.04	77.66
86	ER34a	ExonRegion	0	98.28	55.84	71.79	64.47	171.22	70.32	84.45
87	E34a_E35a	KnownJunction	0	74.54	43.37	55.87	51.83	168.22	73.57	71.51
88	ER35a	ExonRegion	0	54.75	45.70	43.72	47.96	115.83	48.10	59.32
89	E35a_E36a	KnownJunction	0	64.69	55.28	42.13	30.59	102.10	37.73	61.84
90	ER36a	ExonRegion	0	58.82	49.36	34.57	34.98	95.96	54.52	49.06
91	E36a_E37a	KnownJunction	0	94.83	64.42	34.85	40.56	114.39	66.97	57.43
92	E37_Ab	NovelBoundary	1	72.20	27.93	37.06	15.63	130.64	49.77	34.52
93	ER37a	ExonRegion	0	105.12	59.29	51.14	36.62	159.30	68.33	59.61
94	E37_Da	KnownBoundary	0	100.82	34.76	53.29	31.07	143.92	47.30	53.20
95	ER37b	ExonRegion	1	137.61	54.58	75.43	38.74	191.70	81.35	72.37
96	ER37c	ExonRegion	1	129.85	53.98	80.61	41.47	183.43	90.90	84.62
97	E37c_E38a	KnownJunction	1	77.21	33.21	38.07	42.42	192.35	72.31	67.62
98	ER37d	ExonRegion	1	93.58	40.23	53.96	37.69	179.79	88.41	75.78
99	ER37e	ExonRegion	0	85.62	42.32	48.21	42.19	171.35	75.40	74.26
100	ER38a	ExonRegion	0	92.85	36.68	35.54	38.18	113.00	51.75	52.75
101	E38a_E39a	KnownJunction	0	87.44	35.55	28.98	29.56	81.65	31.06	33.42
102	ER39a	ExonRegion	1	50.13	15.31	21.52	17.48	60.78	30.88	29.40