Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	FUBP3	Gene	0	117.81	146.22	193.08	197.29	231.65	164.30	158.92
2	358721	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
3	372378	Transcript	0	0.77	3.44	3.73	6.86	8.91	5.93	4.27
4	319725	Transcript	0	0	0	0	0	0	0	0
5	372376	Transcript	0	0.88	6.02	2.66	2.00	1.94	3.28	1.36
6	IG41_AR1	ActiveIntergenicRegion	0	25.34	7.62	3.07	0.38	13.62	1.11	1.28
7	IG41_SR2	SilentIntergenicRegion	0	16.79	6.74	2.20	0.45	14.09	0.02	1.37
8	IG41_AR2	ActiveIntergenicRegion	0	11.05	6.60	2.21	0.00	9.98	0.98	0.44
9	IG41_AR5	ActiveIntergenicRegion	0	5.29	2.23	9.27	3.77	4.86	2.10	2.02
10	IG41_AR6	ActiveIntergenicRegion	0	3.35	12.83	6.02	7.81	1.98	11.13	4.61
11	ER1a	ExonRegion	0	0.16	2.22	0.00	2.16	4.19	3.32	0.67
12	E1_Ab	KnownBoundary	0	2.34	2.86	1.38	1.35	9.57	4.45	5.06
13	E1_Ac	KnownBoundary	0	2.97	18.18	1.74	26.44	13.95	17.63	4.77
14	ER1b	ExonRegion	0	1.33	6.52	0.52	11.45	11.45	8.41	0.67
15	ER1c	ExonRegion	0	15.25	35.52	21.08	42.08	31.21	33.47	18.24
16	E1a_E2a	KnownJunction	0	66.01	100.07	81.91	104.79	76.58	89.11	58.20
17	ER2a	ExonRegion	0	116.87	174.39	160.90	209.61	160.88	190.03	120.09
18	E2a_E3a	KnownJunction	0	0.00	5.41	0.00	4.47	2.05	5.39	0.59
19	E2a_E4a	KnownJunction	0	112.69	145.12	150.04	186.03	220.59	177.12	97.11
20	ER3a	ExonRegion	0	3.52	12.03	9.92	3.52	5.71	3.28	3.96
21	E3a_E4a	KnownJunction	0	0.00	6.62	0.00	0.00	0.00	4.48	0.89
22	ER4a	ExonRegion	0	145.66	212.46	219.65	271.87	243.53	250.54	158.33
23	E4a_E5a	KnownJunction	0	117.05	163.67	175.36	215.86	249.80	205.02	139.26
24	ER5a	ExonRegion	0	146.28	241.54	238.59	328.30	301.41	287.96	194.42
25	E5a_E6a	KnownJunction	0	128.68	210.25	262.43	304.45	292.91	266.68	201.08
26	ER6a	ExonRegion	0	164.87	244.69	282.37	360.27	284.02	280.53	226.20
27	E6a_E7a	KnownJunction	0	189.28	233.29	283.91	300.47	286.11	237.77	220.12
28	E6a_E8a	NovelJunction	1	1.72	13.66	4.76	5.31	1.91	22.91	1.59
29	E6a_E9a	NovelJunction	1	4.41	4.07	3.79	13.44	1.78	17.55	2.11
30	ER7a	ExonRegion	0	150.91	216.27	271.71	305.85	282.39	247.86	234.99
31	E7a_E8a	KnownJunction	0	116.08	189.84	233.76	291.74	295.86	223.43	217.49
32	ER8a	ExonRegion	0	169.57	231.99	282.04	333.38	423.40	228.58	260.13
33	E8a_E9a	KnownJunction	0	112.19	288.22	211.45	358.50	392.91	242.43	236.73
34	ER9a	ExonRegion	0	127.68	299.60	232.99	360.33	338.04	254.34	260.15
35	E9a_E10a	KnownJunction	0	156.32	293.48	280.67	328.86	397.50	256.66	263.07
36	ER10a	ExonRegion	0	182.27	322.34	297.16	364.72	474.12	266.61	287.72
37	E10_Da	NovelBoundary	1	62.85	1.63	98.31	5.77	1.11	0.00	6.68
38	E10a_E11a	KnownJunction	0	184.24	338.17	288.90	400.57	375.83	325.78	293.08
39	ER11a	ExonRegion	0	167.83	325.04	280.00	383.93	372.58	278.72	259.06
40	E11a_E12a	KnownJunction	0	146.44	276.06	256.58	362.45	290.35	283.03	237.51
41	E12a_E19b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
42	E12b_E19c	KnownJunction	0	0.00	0.00	0.72	0.00	0.00	0.00	0.00
43	ER12a	ExonRegion	0	146.27	268.34	262.78	365.95	359.81	278.16	250.67
44	ER12b	ExonRegion	0	142.16	250.26	259.44	372.84	403.31	275.85	256.35
45	ER12c	ExonRegion	0	135.49	251.84	252.33	348.07	424.97	271.85	263.78
46	E12c_E13a	KnownJunction	0	147.97	223.73	247.05	316.59	254.34	251.19	253.55
47	E13_Aa	NovelBoundary	1	47.08	9.17	78.52	5.04	0.00	1.21	2.05
48	ER13a	ExonRegion	0	77.00	218.79	133.69	280.16	204.07	217.87	177.74
49	E13a_E14a	KnownJunction	0	89.07	221.31	195.57	274.73	243.46	218.71	235.68
50	ER14a	ExonRegion	0	89.04	203.50	148.91	249.22	240.11	190.41	192.59
51	E14a_E15a	KnownJunction	0	82.23	164.72	117.32	219.25	204.41	180.12	160.66
52	ER15a	ExonRegion	0	88.66	204.16	149.71	248.67	208.67	186.53	178.07
53	E15a_E16a	KnownJunction	0	94.58	227.64	160.70	268.88	162.13	198.69	175.13
54	ER16a	ExonRegion	0	98.00	202.33	160.46	222.27	165.59	179.99	168.47
55	E16a_E17a	KnownJunction	0	93.63	175.15	138.69	219.22	143.37	163.21	157.20
56	ER17a	ExonRegion	0	58.29	143.35	87.14	174.35	188.56	134.10	141.45
57	E17a_E18a	KnownJunction	1	32.58	91.14	64.24	117.09	126.65	79.70	111.20
58	E17a_E19a	NovelJunction	1	9.63	44.53	26.63	72.60	25.73	54.81	43.31
59	ER18a	ExonRegion	0	47.38	102.84	82.59	125.53	124.91	88.46	121.57
60	E18a_E19a	KnownJunction	0	61.20	110.47	98.34	122.24	125.32	89.75	123.55
61	ER19a	ExonRegion	0	60.01	111.44	91.63	126.14	130.18	95.67	109.14
62	E19_Ab	KnownBoundary	1	20.81	37.41	35.84	55.37	36.08	46.50	47.27
63	E19_Ac	KnownBoundary	0	38.62	55.93	36.63	45.65	46.36	36.53	39.87
64	ER19b	ExonRegion	0	69.16	117.84	88.74	147.14	131.20	106.66	107.93
65	ER19c	ExonRegion	0	100.33	130.96	127.99	181.10	201.51	140.26	152.18
66	E19a_E22a	KnownJunction	0	139.74	127.60	183.60	210.06	344.04	148.34	195.38
67	ER20a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
68	ER21a	ExonRegion	0	0.77	3.44	3.73	6.86	8.91	5.93	4.27
69	ER22a	ExonRegion	0	143.18	87.61	232.14	141.89	229.09	141.73	143.23