Order SeqName SeqType IsAE Lum_Epi Lum_Epi2 Myo_Epi Myo_Epi2 hESCs StemLike vHMECs 1 ENG Gene 0 18.08 14.41 26.49 12.00 10.56 34.24 63.86 2 344849 Transcript 0 2.08 3.39 2.29 2.81 0.68 3.94 4.76 3 373203 Transcript 0 15.50 9.75 24.82 9.81 12.56 25.94 75.50 4 ER1a ExonRegion 0 1.98 5.12 2.78 2.06 0.21 5.82 5.12 5 E1_Ab KnownBoundary 0 2.04 5.75 2.28 2.74 0.00 7.40 6.66 6 ER1b ExonRegion 0 5.66 8.10 7.07 4.86 1.42 14.25 21.56 7 E1a_E2a KnownJunction 1 9.43 8.09 13.19 2.90 3.09 24.47 33.18 8 ER2a ExonRegion 0 19.05 15.21 20.16 10.62 3.11 39.00 58.90 9 E2a_E3a KnownJunction 0 15.35 10.17 24.60 6.04 3.90 25.75 53.70 10 ER3a ExonRegion 0 20.55 19.26 33.56 11.26 2.96 46.19 72.50 11 E3a_E4a KnownJunction 0 26.67 10.19 37.02 12.90 5.65 32.03 63.46 12 ER4a ExonRegion 0 15.76 19.64 24.86 16.23 3.72 32.46 53.52 13 E4a_E5a KnownJunction 0 10.60 18.07 16.61 14.17 0.00 17.55 27.34 14 ER5a ExonRegion 0 6.15 6.90 10.96 9.82 2.20 17.24 24.75 15 E5a_E6a KnownJunction 0 10.78 3.26 21.74 9.78 2.72 19.05 41.53 16 ER6a ExonRegion 0 22.58 12.89 34.94 15.30 13.02 30.78 71.00 17 E6a_E7a KnownJunction 0 36.98 15.32 59.18 14.85 18.23 41.43 112.36 18 ER7a ExonRegion 0 35.89 17.50 54.44 20.55 14.05 52.67 99.58 19 E7a_E8a KnownJunction 0 34.50 20.99 64.62 17.96 26.70 57.89 135.83 20 ER8a ExonRegion 0 33.93 15.39 50.86 15.08 25.98 50.33 124.00 21 E8a_E9a KnownJunction 0 31.39 21.60 48.67 12.92 36.26 34.87 125.54 22 E9_Aa NovelBoundary 0 9.76 8.22 4.54 1.63 2.01 1.55 8.74 23 ER9a ExonRegion 0 35.47 24.10 49.78 15.12 25.04 41.13 168.67 24 E9_Da NovelBoundary 0 18.28 10.27 17.27 1.68 4.22 7.72 31.74 25 E9a_E10a KnownJunction 0 23.85 16.37 27.20 5.99 19.59 28.92 125.64 26 I9_SR1 SilentIntronRegion 1 2.50 3.64 1.39 0.70 3.58 0.98 12.85 27 E10_Aa NovelBoundary 0 7.04 13.61 6.19 3.17 2.14 2.84 19.62 28 ER10a ExonRegion 0 24.57 19.34 32.95 8.19 18.73 47.72 139.05 29 E10a_E11a KnownJunction 0 19.63 18.86 31.17 8.07 24.02 45.48 109.71 30 ER11a ExonRegion 1 32.37 20.04 45.91 9.56 26.18 65.29 138.62 31 E11a_E12a KnownJunction 1 28.16 20.70 47.94 6.45 21.51 58.05 139.03 32 E12_Aa NovelBoundary 0 12.52 9.54 12.47 4.61 1.84 3.16 17.90 33 ER12a ExonRegion 0 22.52 22.08 34.66 17.73 20.15 48.03 92.54 34 E12a_E13a KnownJunction 0 18.71 12.72 30.52 18.48 18.60 49.42 93.81 35 E13_Aa NovelBoundary 0 11.33 6.20 20.02 8.61 7.22 1.63 12.50 36 ER13a ExonRegion 0 20.24 10.47 31.82 16.94 17.60 46.16 85.86 37 E13_Da NovelBoundary 0 9.50 8.38 10.17 14.63 6.55 4.77 12.12 38 E13a_E14a KnownJunction 0 19.01 10.69 26.48 10.97 9.87 48.70 67.76 39 I13 Intron 0 8.90 8.41 6.59 7.31 4.38 5.28 11.09 40 I13_SR1 SilentIntronRegion 0 7.27 8.81 3.17 7.79 2.37 3.59 5.85 41 I13_SR2 SilentIntronRegion 0 12.32 10.37 7.72 10.38 2.86 10.03 10.60 42 I13_AR2 ActiveIntronRegion 0 9.11 8.52 6.92 7.35 4.63 5.32 11.65 43 E14_Aa NovelBoundary 0 11.93 4.47 8.10 6.07 1.04 5.82 19.53 44 ER14a ExonRegion 0 19.72 18.35 28.90 15.63 15.79 48.86 87.20 45 E14_Da KnownBoundary 0 4.94 5.86 10.42 2.68 0.00 10.48 13.21 46 E14a_E14b KnownJunction 0 15.50 9.75 24.82 9.81 12.56 25.94 75.50 47 ER14b ExonRegion 0 3.88 4.46 4.08 5.75 1.02 6.01 7.48 48 E14_Ab KnownBoundary 0 2.20 5.31 2.85 4.31 1.78 0.00 1.53 49 ER14c ExonRegion 0 15.59 13.57 22.74 11.86 9.77 32.49 42.79 50 ER14d ExonRegion 0 0.38 0.61 0.00 0.62 0.81 0.00 1.69 51 IG27 Intergenic 0 10.90 8.87 10.09 5.98 2.44 4.47 13.28 52 IG27_AR2 ActiveIntergenicRegion 0 11.66 8.46 10.47 8.33 2.05 4.42 14.66 53 IG27_SR2 SilentIntergenicRegion 0 10.28 9.29 9.81 3.87 2.82 4.54 12.11