Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	TNC	Gene	0	249.57	77.04	2681.20	2418.55	10.40	168.52	663.83
2	345230	Transcript	1	7.29	9.56	2075.45	1705.82	3.69	16.64	84.76
3	350763	Transcript	0	0	0	0	0	0	0	0
4	340094	Transcript	0	12.62	0.00	30.41	8.64	2.14	3.06	5.03
5	341037	Transcript	1	253.29	58.95	1244.14	710.55	1.84	175.08	907.15
6	346706	Transcript	1	14.70	1.63	428.94	159.27	0.00	4.90	11.49
7	ER1a	ExonRegion	0	72.58	24.96	592.41	744.76	2.16	42.26	111.49
8	E1a_E2a	KnownJunction	0	82.83	68.23	921.27	1716.63	3.25	104.71	233.33
9	ER2a	ExonRegion	0	167.55	76.56	2159.87	2315.35	5.03	160.81	398.54
10	E2a_E3a	KnownJunction	0	105.50	49.55	1448.00	1962.70	3.27	90.02	345.89
11	ER3a	ExonRegion	0	161.57	79.13	1927.92	2686.17	6.73	112.65	546.71
12	E3a_E4a	KnownJunction	0	206.59	50.94	2450.10	2427.61	10.12	109.66	515.16
13	ER4a	ExonRegion	0	279.39	89.62	3482.35	3256.65	11.22	153.20	636.40
14	E4a_E5a	KnownJunction	0	248.86	85.17	3925.46	3348.62	10.58	147.88	665.28
15	ER5a	ExonRegion	0	237.83	72.66	4098.50	3023.37	8.43	135.01	641.85
16	E5a_E6a	KnownJunction	0	165.83	76.82	3210.00	2462.58	8.37	127.65	471.36
17	ER6a	ExonRegion	0	211.40	78.79	3843.33	2790.58	7.87	139.46	611.39
18	E6a_E7a	KnownJunction	0	212.61	99.15	3579.59	3164.43	11.55	158.20	753.20
19	ER7a	ExonRegion	0	232.88	96.35	3973.36	4063.26	13.55	188.20	1000.52
20	E7a_E8a	KnownJunction	1	206.54	107.32	4107.32	4466.43	19.46	220.43	1155.51
21	E8_Aa	NovelBoundary	1	75.69	0.00	1587.45	5.80	0.00	3.22	1.68
22	ER8a	ExonRegion	0	254.46	107.75	4439.96	4255.52	16.39	208.22	1081.70
23	E8a_E9a	KnownJunction	0	262.57	68.12	4038.14	3357.51	8.53	183.79	812.42
24	ER9a	ExonRegion	0	271.49	88.71	4290.55	3623.45	14.63	182.01	923.39
25	E9a_E10a	KnownJunction	0	264.87	102.46	4357.79	3351.52	19.39	152.36	953.97
26	ER10a	ExonRegion	0	325.20	83.80	4586.93	3448.33	18.01	168.11	889.04
27	E10a_E11a	KnownJunction	1	196.42	55.20	1026.72	871.03	2.07	106.13	617.94
28	E10a_E15a	KnownJunction	0	12.62	0.00	30.41	8.64	2.14	3.06	5.03
29	E10a_E17a	KnownJunction	1	14.70	1.63	428.94	159.27	0.00	4.90	11.49
30	E10a_E18a	KnownJunction	1	7.29	9.56	2075.45	1705.82	3.69	16.64	84.76
31	I10_SR2	SilentIntronRegion	1	54.18	3.84	362.34	74.58	0.00	3.55	2.67
32	I10_AR3	ActiveIntronRegion	1	79.01	5.81	505.88	79.09	0.09	3.85	2.95
33	ER11a	ExonRegion	1	196.82	54.88	1099.00	906.59	5.55	95.73	577.39
34	E11a_E12a	KnownJunction	1	366.58	51.81	1382.43	841.99	4.59	116.66	581.23
35	E11a_E18a	NovelJunction	0	0.00	0.00	37.18	68.27	0.00	1.29	1.78
36	ER12a	ExonRegion	1	304.65	67.41	1465.12	930.92	4.90	139.66	603.18
37	E12a_E13a	KnownJunction	1	169.90	43.66	865.68	620.60	3.90	111.27	521.68
38	E12a_E14a	NovelJunction	1	36.77	7.99	140.38	75.99	0.00	22.57	42.82
39	E12a_E18a	NovelJunction	1	20.50	2.05	247.40	143.64	0.00	0.00	5.04
40	ER13a	ExonRegion	1	171.06	56.38	939.39	703.25	5.24	126.57	617.88
41	E13a_E14a	KnownJunction	1	123.36	43.01	647.05	504.52	6.78	101.38	522.51
42	E13a_E18a	NovelJunction	1	0.00	0.00	55.69	96.36	0.00	0.00	8.61
43	I13	Intron	1	53.62	3.49	320.17	53.83	0.04	3.01	5.69
44	I13_SR1	SilentIntronRegion	1	53.72	3.50	320.76	53.93	0.04	3.02	5.70
45	ER14a	ExonRegion	1	192.54	58.45	1017.39	634.72	4.89	122.72	556.95
46	E14a_E15a	KnownJunction	1	214.57	45.79	1392.73	555.75	4.43	107.98	595.90
47	E15_Aa	NovelBoundary	1	190.13	0.00	1088.31	50.96	0.00	3.32	3.21
48	ER15a	ExonRegion	1	438.41	82.82	2271.92	894.11	9.31	185.20	904.09
49	E15a_E16a	KnownJunction	1	51.67	13.35	208.07	93.19	3.78	25.25	55.19
50	E15a_E17a	KnownJunction	1	253.29	58.95	1244.14	710.55	1.84	175.08	907.15
51	E15a_E18a	NovelJunction	1	2.40	2.84	25.77	10.21	0.00	11.01	48.71
52	I15_AR2	ActiveIntronRegion	1	62.37	4.86	397.17	97.26	0.00	4.70	8.88
53	I15_SR2	SilentIntronRegion	1	76.87	4.16	446.46	82.48	0.25	6.14	3.11
54	I15_AR7	ActiveIntronRegion	1	69.62	4.15	414.62	93.05	0.00	11.56	5.26
55	I15_AR8	ActiveIntronRegion	1	61.00	3.43	383.04	77.78	0.10	9.73	6.61
56	E16_Aa	NovelBoundary	1	97.55	5.49	608.33	164.80	0.00	12.97	13.80
57	ER16a	ExonRegion	1	130.76	21.64	717.96	285.18	7.37	51.32	60.09
58	E16_Da	NovelBoundary	1	128.91	18.55	648.88	219.87	0.00	19.30	18.80
59	E16a_E17a	KnownJunction	1	112.17	14.76	496.05	295.21	5.37	66.44	76.29
60	I16	Intron	1	68.22	4.64	384.88	88.40	0.15	6.99	9.09
61	I16_AR1	ActiveIntronRegion	1	78.48	8.59	392.03	135.44	0.28	11.48	11.70
62	I16_SR1	SilentIntronRegion	1	58.81	7.42	350.24	77.21	0.24	6.17	6.82
63	I16_AR2	ActiveIntronRegion	1	68.08	3.11	395.78	77.71	0.09	5.96	8.80
64	ER17a	ExonRegion	1	406.29	79.79	2499.09	1048.60	12.85	174.31	790.98
65	E17a_E18a	KnownJunction	1	292.14	63.73	1938.83	807.34	6.59	160.74	708.83
66	E18_Aa	NovelBoundary	1	137.73	0.00	913.95	26.68	0.00	1.05	3.30
67	ER18a	ExonRegion	0	369.31	79.01	4353.99	2765.13	15.64	197.03	862.96
68	E18a_E19a	KnownJunction	0	360.42	98.73	4067.35	3074.68	19.41	215.71	877.24
69	ER19a	ExonRegion	0	394.92	103.27	4591.88	3304.55	20.69	215.28	958.51
70	E19a_E20a	KnownJunction	0	397.85	102.75	4561.89	3783.14	21.60	276.55	1036.78
71	ER20a	ExonRegion	0	342.00	113.48	4321.16	3829.70	19.13	252.98	1034.09
72	E20a_E21a	KnownJunction	0	514.73	94.00	5851.49	4078.32	25.20	295.87	1161.68
73	ER21a	ExonRegion	0	424.04	112.87	5039.07	3858.45	19.56	293.69	1192.32
74	E21a_E22a	KnownJunction	0	348.22	106.16	4266.83	3449.13	17.20	308.09	1095.47
75	ER22a	ExonRegion	0	328.36	99.57	4183.08	3389.35	17.46	285.52	1065.35
76	E22a_E23a	KnownJunction	0	320.23	111.05	4142.05	3235.25	17.80	263.76	1189.35
77	ER23a	ExonRegion	0	297.16	97.61	3746.55	3219.53	16.12	257.93	979.84
78	E23a_E24a	KnownJunction	0	246.66	106.35	3213.12	3283.77	17.31	235.49	856.10
79	ER24a	ExonRegion	0	263.38	98.66	3168.17	3337.51	13.29	227.73	752.45
80	E24a_E25a	KnownJunction	0	238.83	95.29	3399.53	3426.21	14.68	226.89	780.95
81	ER25a	ExonRegion	0	348.69	83.80	3811.73	3505.01	14.75	273.41	812.58
82	E25a_E26a	KnownJunction	0	406.50	76.63	4047.88	3592.01	12.93	274.13	765.66
83	ER26a	ExonRegion	0	320.48	94.77	3510.19	3742.83	15.08	284.91	864.82
84	E26a_E27a	KnownJunction	0	372.07	106.16	3700.38	4468.22	20.49	375.71	1011.55
85	ER27a	ExonRegion	0	348.69	126.05	3892.98	4764.76	20.09	392.45	1088.39
86	E27a_E28a	KnownJunction	0	410.87	95.39	4328.46	4691.64	23.70	389.13	1112.94
87	I27_AR2	ActiveIntronRegion	1	52.20	2.77	305.96	61.45	0.09	5.39	6.35
88	ER28a	ExonRegion	0	304.05	64.01	3328.56	2510.35	14.56	233.02	593.77
89	IG27_AR11	ActiveIntergenicRegion	0	0.61	0.48	20.00	9.88	0.00	0.00	2.13