Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	C9orf129	Gene	0	0.00	0.00	0.00	0.08	10.90	0.00	0.09
2	375419	Transcript	0	0.39	0.00	0.00	0.04	11.62	0.00	0.04
3	IG49	Intergenic	0	0.02	0.04	0.01	0.03	12.15	0.03	0.00
4	IG49_SR1	SilentIntergenicRegion	0	0.02	0.04	0.01	0.03	12.16	0.03	0.00
5	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	10.88	0.00	0.00
6	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	19.09	0.00	0.00
7	ER2a	ExonRegion	0	0.00	0.00	0.00	0.00	14.72	0.00	0.00
8	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00
9	ER3a	ExonRegion	0	0.00	0.00	0.00	0.33	16.82	0.00	0.34
10	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	12.40	0.00	0.00
11	I3	Intron	0	0.13	0.17	0.04	0.14	18.14	0.14	0.01
12	I3_AR1	ActiveIntronRegion	0	0.00	0.00	0.00	0.77	26.92	0.00	0.00
13	I3_SR1	SilentIntronRegion	0	0.11	0.04	0.02	0.00	17.80	0.09	0.01
14	I3_AR2	ActiveIntronRegion	0	0.81	0.00	0.00	0.38	9.75	0.37	0.00
15	I3_SR2	SilentIntronRegion	0	0.24	1.76	0.20	0.75	9.86	0.00	0.00
16	I3_AR3	ActiveIntronRegion	0	0.28	0.61	0.16	0.00	21.66	0.44	0.00
17	I3_SR3	SilentIntronRegion	0	0.08	0.28	0.05	0.38	15.14	0.00	0.00
18	I3_AR4	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	29.32	0.00	0.00
19	I3_AR5	ActiveIntronRegion	0	0.00	0.09	0.00	0.10	18.91	0.47	0.00
20	E4_Aa	NovelBoundary	0	3.84	2.94	0.00	0.00	69.55	0.00	0.57
21	ER4a	ExonRegion	0	0.00	0.00	0.00	0.00	11.53	0.00	0.05
22	E4_Da	NovelBoundary	0	0.97	4.10	1.47	1.30	29.48	0.00	0.00
23	E4a_E5a	KnownJunction	0	3.50	0.00	0.00	0.00	14.29	0.00	0.00
24	E5_Aa	NovelBoundary	0	6.51	14.48	0.72	0.00	68.65	1.47	0.57
25	ER5a	ExonRegion	0	0.00	0.00	0.00	0.00	4.85	0.00	0.00