Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	PTPDC1	Gene	0	8.70	3.33	9.60	4.26	24.59	24.13	15.67
2	375360	Transcript	0	3.58	2.51	5.45	2.16	11.47	9.62	8.22
3	288976	Transcript	0	0.65	1.52	0.00	0.31	0.67	2.20	1.35
4	ER1a	ExonRegion	0	0.59	0.71	0.98	1.63	1.92	7.58	1.77
5	E1a_E2a	KnownJunction	0	0.87	1.63	2.20	1.35	8.39	9.30	4.67
6	ER2a	ExonRegion	0	4.31	5.05	7.27	1.60	14.71	13.97	11.54
7	E2a_E4a	KnownJunction	0	8.53	2.63	11.35	4.04	20.89	7.64	14.89
8	ER3a	ExonRegion	0	0.54	0.35	0.00	0.61	0.19	1.78	1.19
9	E3a_E4a	KnownJunction	0	0.77	2.68	0.00	0.00	1.15	2.63	1.50
10	ER4a	ExonRegion	0	6.02	4.82	8.55	4.71	14.99	20.89	13.27
11	E4a_E5a	KnownJunction	0	8.46	7.07	11.47	3.25	22.08	15.44	11.54
12	ER5a	ExonRegion	0	6.92	5.88	10.69	8.17	19.79	21.86	13.79
13	E5a_E6a	KnownJunction	0	2.92	2.02	10.12	9.56	21.05	15.87	11.82
14	ER6a	ExonRegion	0	7.15	5.49	6.74	9.33	24.81	18.82	12.17
15	E6a_E7a	KnownJunction	0	11.55	2.13	6.45	5.36	27.78	20.64	16.18
16	ER7a	ExonRegion	0	18.85	5.13	18.48	9.61	41.47	37.60	22.62
17	E7a_E8a	KnownJunction	0	27.92	5.67	17.20	3.93	50.14	54.97	23.96
18	ER8a	ExonRegion	0	13.50	6.66	14.10	6.60	33.90	38.49	23.27
19	E8_Da	NovelBoundary	0	1.52	1.63	3.43	1.68	5.74	11.10	3.80
20	E8a_E9a	KnownJunction	0	4.52	2.81	10.92	1.65	12.77	24.60	12.75
21	I8	Intron	0	2.45	1.04	5.11	1.61	7.71	9.11	3.57
22	I8_AR1	ActiveIntronRegion	0	1.97	1.60	5.64	1.85	9.48	10.64	4.20
23	I8_SR1	SilentIntronRegion	0	3.35	1.31	5.51	1.68	8.19	9.05	2.99
24	I8_AR2	ActiveIntronRegion	0	1.68	0.54	4.49	1.44	6.48	8.58	3.94
25	ER9a	ExonRegion	0	5.79	4.33	10.92	4.22	24.00	28.38	16.10
26	E9a_E10a	KnownJunction	0	6.44	2.68	9.73	5.91	20.61	12.30	12.05
27	ER10a	ExonRegion	0	7.13	3.14	12.32	2.03	28.67	22.65	21.96
28	E10a_E11a	KnownJunction	0	7.98	6.44	15.40	2.82	30.31	33.71	25.07
29	ER11a	ExonRegion	0	8.53	1.50	9.12	3.17	26.31	21.20	15.23
30	IG5_AR3	ActiveIntergenicRegion	0	1.31	1.21	0.68	1.25	7.53	7.64	4.88
31	IG5_AR4	ActiveIntergenicRegion	0	2.12	1.21	0.72	1.25	6.72	10.24	2.94
32	IG5_AR5	ActiveIntergenicRegion	0	1.57	0.34	0.95	3.14	3.34	8.63	1.51
33	IG5_AR6	ActiveIntergenicRegion	0	6.15	3.15	16.94	4.57	4.92	1.11	7.03
34	IG5_SR3	SilentIntergenicRegion	0	4.48	3.89	12.14	2.64	5.21	2.12	8.05
35	IG5_AR7	ActiveIntergenicRegion	0	3.42	2.59	9.18	2.62	6.94	1.55	10.26
36	IG5_SR4	SilentIntergenicRegion	0	5.73	3.94	11.28	2.48	5.15	0.79	7.77
37	IG5_AR9	ActiveIntergenicRegion	0	2.60	2.00	6.57	2.80	3.71	1.92	8.21