Order	SeqName	SeqType	IsAE	Lum_Epi	Lum_Epi2	Myo_Epi	Myo_Epi2	hESCs	StemLike	vHMECs
1	CCRK	Gene	0	12.35	24.63	15.67	38.14	12.63	37.16	21.44
2	286878	Transcript	0	15.15	13.73	11.42	41.27	8.36	34.63	15.19
3	336654	Transcript	1	0.18	0.36	0.46	2.37	0.07	8.85	1.17
4	375871	Transcript	1	1.94	6.41	2.86	19.07	3.32	32.37	4.03
5	375883	Transcript	0	0	0	0	0	0	0	0
6	325303	Transcript	0	3.87	8.12	7.47	12.16	5.09	5.54	6.82
7	ER1a	ExonRegion	0	4.93	8.57	5.46	13.80	6.26	8.71	8.55
8	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	1.68	0.00	5.68	0.79
9	E1a_E2b	KnownJunction	0	5.04	22.44	8.32	24.17	6.43	10.43	11.88
10	ER2a	ExonRegion	1	0.37	0.73	0.91	3.06	0.14	12.01	1.55
11	E2_Ab	KnownBoundary	1	0.70	1.29	2.31	1.68	0.00	16.72	3.54
12	ER2b	ExonRegion	0	14.35	29.11	21.70	40.02	10.49	43.72	31.20
13	E2a_E3a	KnownJunction	1	9.50	36.28	27.85	40.58	37.39	50.68	33.66
14	ER3a	ExonRegion	0	13.90	34.72	20.99	51.46	19.18	57.75	36.56
15	E3a_E4a	KnownJunction	0	17.32	29.19	21.77	56.11	15.51	80.64	24.94
16	ER4a	ExonRegion	0	15.45	30.19	20.52	46.66	9.88	72.87	21.31
17	E4_Da	NovelBoundary	0	0.63	8.12	1.97	8.78	2.28	17.13	1.78
18	E4a_E5a	KnownJunction	0	0.75	1.63	2.82	6.37	2.07	3.06	4.60
19	E4a_E6a	KnownJunction	0	1.24	12.53	1.38	10.19	2.05	19.27	8.38
20	E4a_E7a	KnownJunction	1	1.94	6.41	2.86	19.07	3.32	32.37	4.03
21	I4	Intron	0	3.22	7.64	2.72	6.52	1.70	5.78	1.06
22	I4_AR1	ActiveIntronRegion	0	3.26	7.75	2.76	6.60	1.72	5.86	1.08
23	E5_Aa	NovelBoundary	0	4.74	17.23	1.78	8.07	2.01	9.57	4.84
24	ER5a	ExonRegion	0	3.79	8.50	6.70	10.55	5.62	4.71	6.49
25	E5_Da	NovelBoundary	0	0.72	8.83	4.37	3.36	2.12	1.18	3.53
26	E5a_E6a	KnownJunction	0	7.08	14.24	12.89	19.56	7.58	8.84	9.36
27	ER6a	ExonRegion	0	11.88	32.40	19.78	33.07	18.33	38.28	24.76
28	E6a_E7a	KnownJunction	1	5.76	23.09	17.30	35.38	9.31	44.84	21.76
29	ER7a	ExonRegion	0	18.94	45.01	23.13	55.37	14.45	75.62	36.97
30	E7a_E8a	KnownJunction	0	19.16	54.09	25.58	56.30	18.33	86.19	42.05
31	ER8a	ExonRegion	0	11.37	37.49	18.98	61.69	17.14	64.64	26.58
32	E8_Da	KnownBoundary	0	2.69	9.80	5.06	24.82	3.20	19.03	6.65
33	E8a_E8b	KnownJunction	1	10.87	13.92	8.62	42.05	8.83	43.17	11.82
34	E8_Ab	KnownBoundary	0	6.78	7.80	4.04	25.11	5.26	22.14	8.81
35	ER8b	ExonRegion	0	12.29	25.11	11.29	58.61	12.42	54.35	21.36
36	ER8c	ExonRegion	0	17.09	30.72	17.25	55.01	18.16	47.94	29.72
37	E8_Db	KnownBoundary	0	10.08	8.51	6.25	23.68	8.09	12.78	13.49
38	E8b_E8c	KnownJunction	0	19.44	13.53	14.23	40.50	7.88	26.08	18.56
39	E8_Ac	KnownBoundary	0	8.75	6.15	4.40	19.48	2.79	12.41	2.31
40	ER8d	ExonRegion	0	25.61	24.30	18.74	57.36	16.74	36.37	28.78
41	ER8e	ExonRegion	0	25.60	25.54	20.83	55.14	16.06	36.84	24.63
42	E8_Dc	KnownBoundary	0	22.16	32.47	19.11	43.86	21.78	31.11	19.96
43	ER8f	ExonRegion	0	11.92	19.25	15.37	31.60	10.73	22.27	14.81